def __init__(self, frames):
Sequence.__init__(self)
# frames is a tuple of frame tuples: see Frame constructor for the
# format of a frame tuple; it is reversed, because _tracemalloc
# returns frames sorted from most recent to oldest, but the
# Python API expects oldest to most recent
self._frames = tuple(reversed(frames))
def __init__(self, fname='', dat=None):
"""
Initialization for SpectralImage can be from a filename or metadata
dictionary.
hdf5 filename is checked against list of supported file types.
Dictionary supercedes loading from a file.
Parameters
----------
fname : str
filename of hdf5 file to open
dat : DictionaryTreeBrowser
metadata dictionary
"""
if dat is not None:
assert isinstance(dat, DictionaryTreeBrowser)
self.dat = dat.copy()
elif self.is_supported(fname):
self.load_h5_data(fname)
else:
raise Exception('No valid dictionary or filename supplied.')
return
self.load_from_metadata()
Sequence.__init__(self)
if self.is_supported(fname):
print('Load from %s complete.' % fname)
print('%d x %d x %d spatial x %d spectral points' %
(len(self.z_array), len(self.x_array), len(
self.y_array), len(self.spec_x_array)))
def __init__(self, frames):
Sequence.__init__(self)
# frames is a tuple of frame tuples: see Frame constructor for the
# format of a frame tuple; it is reversed, because _tracemalloc
# returns frames sorted from most recent to oldest, but the
# Python API expects oldest to most recent
self._frames = tuple(reversed(frames))
def patch_spaces_tuple_Tuple():
# Sequence: `__getitem__`
# Reversible: `__reversed__`*
# Collection:
# Sized: `__len__`
# Iterable: `__iter__`*
# Container: `__contains__`*
# * [optional] Based on `__len__` and `__getitem__` (which should raise
# IndexError), Sequence provides generic slow-ish implementations of
# `__iter__`, `__contains__` and `__reversed__`.
spaces_tuple = importlib.import_module('gym.spaces.tuple')
# patch the missing methods into the class prototype
spaces_tuple.Tuple.__len__ = __len__
spaces_tuple.Tuple.__iter__ = __iter__
# declare Sequence as a virtual base class of Tuple
Sequence.register(spaces_tuple.Tuple)
def __init__(self, traces):
Sequence.__init__(self)
# traces is a tuple of trace tuples: see Trace constructor
self._traces = traces
def __reversed__(self):
# type: () -> Iterable
return reversed(self.data)
def __getitem__(self, index):
# type: (Any) -> Any
return self.data[index]
@property
def _evictcount(self):
# type: () -> int
return len(self)
Sequence.register(Messagebuffer)
class BufferMap(OrderedDict, Evictable):
"""Map of buffers."""
Buffer = Messagebuffer
Empty = Empty
maxsize = None
total = 0
bufmaxsize = None
def __init__(self, maxsize, iterable=None, bufmaxsize=1000):
# type: (int, Iterable, int) -> None
super().__init__()
def __init__(self, path):
Sequence.__init__(self)
self._path = unicodedata.normalize('NFC', str(path))
self._instance = None
def __init__(self, traces):
Sequence.__init__(self)
# traces is a tuple of trace tuples: see Trace constructor
self._traces = traces
else:
from collections import Iterable, Sequence
# Register extension classes that look like a sequence, ie. have a
# length and adressable elements, as a Sequence. Same for Iterable.
for entry in ext.__dict__.values():
# Only consider types (=classes), not object instances
if not isinstance(entry, type): continue
# The Iterable interface means the type contains retrievable items.
# If the type fulfills this but is not already a known Iterable then
# register it as such.
if hasattr(entry, "__getitem__") and not issubclass(entry, Iterable):
Iterable.register(entry)
# A Sequence is an Iterable that also has a determinable length.
if hasattr(entry, "__getitem__") and hasattr(entry, "__len__") \
and not issubclass(entry, Sequence):
Sequence.register(entry)
def bool_md5(self):
return hashlib.md5(self.__getstate__()[1])
bool.md5 = bool_md5
@boost.python.inject_into(grid)
class _():
def show_summary(self, f=None):
if (f is None): f = sys.stdout
print("origin:", self.origin(), file=f)
print("last:", self.last(), file=f)
def __init__(self, frames):
Sequence.__init__(self)
# frames is a tuple of frame tuples: see Frame constructor for the
# format of a frame tuple
self._frames = frames
def remove(self, value):
"""
Remove the first occurrence of a value from the vector.
>>> v1 = v(1, 2, 3, 2, 1)
>>> v2 = v1.remove(1)
>>> v2
pvector([2, 3, 2, 1])
>>> v2.remove(1)
pvector([2, 3, 2])
"""
_EMPTY_PVECTOR = PythonPVector(0, SHIFT, [], [])
PVector.register(PythonPVector)
Sequence.register(PVector)
Hashable.register(PVector)
def python_pvector(iterable=()):
"""
Create a new persistent vector containing the elements in iterable.
>>> v1 = pvector([1, 2, 3])
>>> v1
pvector([1, 2, 3])
"""
return _EMPTY_PVECTOR.extend(iterable)
try:
def __init__(self, traces):
Sequence.__init__(self)
self._traces = traces
KeysView.register(EmptySet)
ItemsView.register(EmptySet)
ValuesView.register(EmptyCollection)
assert issubclass(EmptySet, KeysView)
assert issubclass(EmptySet, ItemsView)
assert issubclass(EmptySet, Set)
assert issubclass(EmptySet, MappingView)
assert issubclass(EmptyCollection, ValuesView)
assert issubclass(EmptyCollection, Collection)
assert issubclass(EmptyCollection, MappingView)
Mapping.register(EmptyMapping)
Set.register(EmptySet)
Sequence.register(EmptySequence)
assert issubclass(EmptyMapping, Mapping)
assert issubclass(EmptySet, Set)
assert issubclass(EmptySequence, Sequence)
if 0:
Mapping.register(EmptyThree)
Set.register(EmptyThree)
Sequence.register(EmptyThree)
assert issubclass(EmptyThree, Mapping)
assert issubclass(EmptyThree, Set)
assert issubclass(EmptyThree, Sequence)
def __reversed__(self):
# type: () -> Iterable
return reversed(self.data)
def __getitem__(self, index):
# type: (Any) -> Any
return self.data[index]
@property
def _evictcount(self):
# type: () -> int
return len(self)
Sequence.register(Messagebuffer) # noqa: E305
@python_2_unicode_compatible
class BufferMap(OrderedDict, Evictable):
"""Map of buffers."""
Buffer = Messagebuffer
Empty = Empty
maxsize = None
total = 0
bufmaxsize = None
def __init__(self, maxsize, iterable=None, bufmaxsize=1000):
# type: (int, Iterable, int) -> None
@classmethod
def from_sequence_range(cls, seq, range_or_slice):
return cls(seq, range_or_slice)
def __len__(self):
return len(self.__rng)
def __iter__(self):
return map(self.__seq.__getitem__, self.__rng)
def __reversed__(self):
return map(self.__seq.__getitem__, reversed(self.__rng))
'''
Sequence.register(int)
Sequence.register(range)
assert not isinstance(int, Sequence)
assert isinstance(range, Sequence) ??????? why fail????
'''
def t():
ls = SeqSliceView([1, 2, 3, 4, 5, 6, 7], range(1, 6, 2))
ls2 = SeqSliceView(ls, slice(-1, None, -1))
assert repr(ls2) == 'SeqSliceView([1, 2, 3, 4, 5, 6, 7], range(5, -1, -2))'
if __name__ == "__main__":
t()
"""
__slots__ = ('first', 'rest')
def __new__(cls, first, rest):
instance = super(PList, cls).__new__(cls)
instance.first = first
instance.rest = rest
return instance
def __bool__(self):
return True
__nonzero__ = __bool__
Sequence.register(PList)
Hashable.register(PList)
class _EmptyPList(_PListBase):
__slots__ = ()
def __bool__(self):
return False
__nonzero__ = __bool__
@property
def first(self):
raise AttributeError("Empty PList has no first")
def __init__(self, elements: t.Sequence[t.Any], root: "NodeTree",
tree: tuple):
Sequence.__init__(self)
Node.__init__(self, root, tree)
self._elements: t.Sequence[t.Any] = elements
def __init__(self, file_path):
File.__init__(self, file_path)
Sequence.__init__(self)
self._instance = None
def __init__(self, frames):
Sequence.__init__(self)
# frames is a tuple of frame tuples: see Frame constructor for the
# format of a frame tuple
self._frames = frames
raise TypeError("'%s' object cannot be interpreted as an index" %
type(index).__name__)
if index >= 0:
return self.popleft(index).left
shifted = len(self) + index
if shifted < 0:
raise IndexError(
"pdeque index {0} out of range {1}".format(index, len(self)), )
return self.popleft(shifted).left
index = Sequence.index
Sequence.register(PDeque)
Hashable.register(PDeque)
def pdeque(iterable=(), maxlen=None):
"""
Return deque containing the elements of iterable. If maxlen is specified then
len(iterable) - maxlen elements are discarded from the left to if len(iterable) > maxlen.
>>> pdeque([1, 2, 3])
pdeque([1, 2, 3])
>>> pdeque([1, 2, 3, 4], maxlen=2)
pdeque([3, 4], maxlen=2)
"""
t = tuple(iterable)
if maxlen is not None:
def __init__(self, frames):
Sequence.__init__(self)
self._frames = tuple(reversed(frames))
def __reversed__(self):
# type: () -> Iterable
return reversed(self.data)
def __getitem__(self, index):
# type: (Any) -> Any
return self.data[index]
@property
def _evictcount(self):
# type: () -> int
return len(self)
Sequence.register(Messagebuffer) # noqa: E305
@python_2_unicode_compatible
class BufferMap(OrderedDict, Evictable):
"""Map of buffers."""
Buffer = Messagebuffer
Empty = Empty
maxsize = None
total = 0
bufmaxsize = None
def __init__(self, maxsize, iterable=None, bufmaxsize=1000):
# type: (int, Iterable, int) -> None
from collections.abc import Sequence as _Sequence from . import _pyrodigal from ._pyrodigal import Gene, Genes, Pyrodigal __all__ = ["Gene", "Genes", "Pyrodigal"] __doc__ = _pyrodigal.__doc__ __author__ = "Martin Larralde <*****@*****.**>" __license__ = "GPLv3" __version__ = "0.3.2" _Sequence.register(Genes)
def __jclass_init__(self):
Sequence.register(self)
MutableSequence.register(self)
def truncate(self: VectorOrSub, max_length: Realish) -> VectorOrSub:
if self.length > max_length:
return self.scale_to(max_length)
return self
def scale_to(self: VectorOrSub, length: Realish) -> VectorOrSub:
"""
Scale the vector to the given length
"""
try:
scale = length / self.length
except ZeroDivisionError:
scale = 1
return self.scale_by(scale)
scale = scale_to
def reflect(self: VectorOrSub, surface_normal: VectorLike) -> VectorOrSub:
"""
Calculate the reflection of the vector against a given surface normal
"""
surface_normal = Vector2.convert(surface_normal)
if not isclose(surface_normal.length, 1):
raise ValueError("Reflection requires a normalized vector.")
return self - (2 * (self * surface_normal) * surface_normal)
Sequence.register(Vector2)