Beispiel #1
0
def boyer_moore(t, w, n, m):
    BM = suffix.boyer_moore_shift(w, m)
    i = 1
    while i <= n - m + 1:
        j = m
        while j > 0 and t[i + j - 1] == w[j]:
            j = j - 1
        if j == 0:
            yield i
        i = i + BM[j]
Beispiel #2
0
def boyer_moore_bad_shift(t, w, n, m):
    BM, LAST = suffix.boyer_moore_shift(w, m), suffix.last_occurrence(w[:-1])
    i = 1
    while i <= n - m + 1:
        j = m
        while j > 0 and t[i + j - 1] == w[j]:
            j = j - 1
        if j == 0:
            yield i
        bad_character = LAST.get(t[i + j - 1], 0)
        i = i + max(BM[j], j - bad_character)
Beispiel #3
0
def boyer_moore_galil(t, w, n, m):
    BM = suffix.boyer_moore_shift(w, m)
    i, memory = 1, 0
    while i <= n - m + 1:
        j = m
        while j > memory and t[i + j - 1] == w[j]:
            j = j - 1
        if j == memory:
            yield i
            i, memory = i + BM[0], m - BM[0]
        else:
            i, memory = i + BM[j], 0
Beispiel #4
0
def boyer_moore_apostolico_giancarlo(t, w, n, m):
  def Q(i, k):
    return w[max(0, i - k) + 1:i] == w[m - min(k, i) + 1:m]
  BM = suffix.boyer_moore_shift(w, m)
  skip = [0] * (n + 1)
  i = 1
  while i <= n - m + 1:
    j = m
    while j > 0:
      if Q(j, skip[i + j - 1]) and t[i + j - 1] == w[j]:
        j = j - max(1, skip[i + j - 1])
      else:
        break
    if j <= 0:
      yield i
      j = 1
    skip[i + m - 1] = m - j
    i = i + BM[j]
Beispiel #5
0
def boyer_moore_turbo(t, w, n, m):
    BM = suffix.boyer_moore_shift(w, m)
    i, memory, shift = 1, 0, 0
    while i <= n - m + 1:
        j = m
        while j > 0 and t[i + j - 1] == w[j]:
            if memory != 0 and j == m - shift:
                j = j - memory
            else:
                j = j - 1
        if j == 0:
            yield i
        match = m - j
        turbo_shift = memory - match
        shift = max(BM[j], turbo_shift)
        if shift > BM[j]:
            i = i + max(shift, match + 1)
            memory = 0
        else:
            i = i + shift
            memory = min(m - shift, match)
 def check_boyer_moore_shift(self, t, n, reference):
   self.assertEqual(suffix.boyer_moore_shift_brute_force(t, n), reference)
   self.assertEqual(suffix.boyer_moore_shift(t, n), reference)