def duplicate_dataset_imgs_helper(dataset_path, out_dataset_path, fname_start,
fname_end):
print("")
print("")
print("Duplicate seed on:")
print("Dataset: " + dataset_path)
print("")
print("Out Training Set: " + out_dataset_path)
training_path = common.dataset_path(dataset_path, net)
out_training_path = common.dataset_path(out_dataset_path, net)
trainingset = ImageDataset()
print("loading hdf5 training set: {}".format(training_path))
trainingset.load_hdf5(training_path)
print("hdf5 file loaded.")
print("Getting sub dataset from filename filters...")
seeds_dataset = trainingset.sub_dataset_from_filename(
filename_start_with=fname_start, filename_end_with=fname_end)
print("Merging seed-only sub dataset with original dataset")
trainingset.merge_with_dataset(seeds_dataset)
print("Saving merged dataset in: " + out_training_path)
trainingset.save_hdf5(out_training_path)
print("Done.")
def main():
config.init()
for crop_size, crop_size_stamp in zip(config.ALL_CROP_SIZE, config.ALL_CROP_SIZE_STAMP):
crop = crop_size['crop']
size = crop_size['size']
dataset_path = common.dataset_path(config.DATASET, crop, size)
out_dataset_path = common.dataset_path(config.DATASET + '_so', crop, size)
print("")
print("")
print("Seed only dataset.")
print("Original dataset: " + dataset_path)
print("Out seed only dataset: " + out_dataset_path)
print("")
trainingset = ImageDataset()
print("loading hdf5 dataset set: {}".format(dataset_path))
trainingset.load_hdf5(dataset_path)
print("hdf5 file loaded.")
print("Getting sub dataset from filter (seed files)...")
seeds_dataset = trainingset.sub_dataset_from_filename(filename_start_with=FNAME_START_WITH, remove_empty_classes=True)
print("Saving merged dataset in: " + out_dataset_path)
seeds_dataset.save_hdf5(out_dataset_path)
print("Done.")
print("")
print("All done.")
def exp_duplicate_seed():
dataset = cfg.DATASET
for crop_size in cfg.all_crop_sizer:
crop = crop_size['crop']
size = crop_size['size']
train_path = common.dataset_path(dataset + '_train', crop, size)
train_path_ds = common.dataset_path(dataset + '_train_ds', crop, size)
print("")
print("")
print("Duplicate seed on:")
print("Training Set: " + train_path)
print("")
print("Out Training Set: " + train_path_ds)
trainingset = ImageDataset()
print("loading hdf5 training set: {}".format(train_path))
trainingset.load_hdf5(train_path)
print("hdf5 file loaded.")
print("Getting sub dataset from filter (seed files)...")
seeds_dataset = trainingset.sub_dataset_from_filename(filename_start_with=FNAME_START_WITH)
print("Merging seed-only sub dataset with original dataset")
trainingset.merge_with_dataset(seeds_dataset)
print("Saving merged dataset in: " + train_path_ds)
trainingset.save_hdf5(train_path_ds)
print("Done.")
print("")
print("All done.")
def main():
config.init()
for crop_size, crop_size_stamp in zip(config.ALL_CROP_SIZE,
config.ALL_CROP_SIZE_STAMP):
crop = crop_size['crop']
size = crop_size['size']
dataset_path = common.dataset_path(config.DATASET, crop, size)
out_validset_path = common.dataset_path(config.DATASET + '_sg_valid',
crop, size)
out_trainset_path = common.dataset_path(config.DATASET + '_sg_train',
crop, size)
print("")
print("")
print("Seed + Google train/valid set.")
print("Original dataset: " + dataset_path)
print("Out s+g trainset: " + out_trainset_path)
print("Out s+g validset: " + out_validset_path)
print("")
trainingset = ImageDataset()
print("loading hdf5 dataset set: {}".format(dataset_path))
trainingset.load_hdf5(dataset_path)
print("hdf5 file loaded.")
print("Getting sub dataset (seed dataset)")
seeds_dataset = trainingset.sub_dataset_from_filename(
filename_start_with="seed")
print("Getting sub dataset (google dataset)")
google_dataset = trainingset.sub_dataset_from_filename_multi(
filename_start_with=["google"], filename_end_with=FNAME_END)
print("Splitting google dataset in train/valid")
google_train, google_valid = google_dataset.validation_per_class_split(
[SplitOptions("", 0.33)])
print("Creating double_seeds_dataset")
double_seeds_dataset = ImageDataset.merge_datasets(
seeds_dataset, seeds_dataset)
print(
"Creating train dataset (merge google_train with double_seeds_dataset)"
)
train = ImageDataset.merge_datasets(google_train, double_seeds_dataset)
print("Creating valid dataset (merge google_valid with seeds_dataset)")
valid = ImageDataset.merge_datasets(google_valid, seeds_dataset)
print("Saving train on h5")
train.save_hdf5(out_trainset_path)
print("Saving valid on h5")
valid.save_hdf5(out_validset_path)
print("Done.")
print("")
print("All done.")
def exp_split_dataset():
dataset = cfg.dataset
for crop_size in cfg.all_crop_size:
crop = crop_size['crop']
size = crop_size['size']
dataset_path = common.dataset_path(dataset, crop, size)
train_path = common.dataset_path(dataset + '_train', crop, size)
valid_path = common.dataset_path(dataset + '_valid', crop, size)
split_dataset_helper(dataset_path, train_path, valid_path,
split_options, exclude_file_starting_with)
print("")
print("All done.")
def main():
config.init()
print NETS
for feat_net in NETS:
crop, size = config.crop_size(net=feat_net)
train_name = config.DATASET + "_so"
test_name = config.DATASET + '_so_test'
DATASETS = [train_name, test_name]
# DATASETS = [test_name]
print DATASETS
for dataset in DATASETS:
in_dataset_path = common.dataset_path(dataset, crop, size)
out_dataset_path = common.feat_path(dataset, feat_net)
print("")
print("Features net: {}".format(feat_net))
print("Input dataset: {}".format(in_dataset_path))
print("Out feat dataset: {}".format(out_dataset_path))
features_extraction_helper(feat_net, in_dataset_path, out_dataset_path, alternative_out_layer=None, verbose = True)
print("Done.")
print("")
print("")
print("All done.")
def exp_convert_folder_to_dataset():
dataset = cfg.dataset
for crop_size in cfg.all_crop_size:
crop = crop_size['crop']
size = crop_size['size']
folder_dataset_path = common.folder_dataset_path(dataset)
out_h5 = common.dataset_path(dataset, crop, size)
imdir_label_to_hdf5_dataset(
folder_dataset_path,
out_h5,
im_crop=[crop, crop],
im_size=[size, size],
remove_label_with_no_imgs=False,
# chunk_size_in_ram=300,
# skip_big_imgs=False,
# big_images_pixels=10000 * 10000,
verbose=True)
