debug=True)
man.add_mod(lpu_ret)
if not args.retina_only:
print('Parsing lamina lpu data')
n_dict_lam, s_dict_lam = LPU.lpu_parser(LAM_GEXF_FILE)
print('Initializing lamina LPU')
lpu_lam = LPU(dt, n_dict_lam, s_dict_lam,
input_file=None,
output_file=LAM_OUTPUT_FILE, port_ctrl=port_ctrl,
port_data=port_data, device=args.lam_dev, id='lamina',
debug=False)
man.add_mod(lpu_lam)
print('Connecting retina and lamina')
eyemodel.connect_retina_lamina(man, lpu_ret, lpu_lam)
print('Starting simulation')
start_time = time.time()
man.start(steps=args.steps)
man.stop()
print('Simulation complete: Duration {} seconds'.format(time.time() -
start_time))
if args.output:
eyemodel.visualise_output(media_file=RET_OUTPUT_MPEG,
model_output=RET_OUTPUT_GPOT,
config = {'LPU': 'retina',
'type':args.video_type})
if not args.retina_only:
if 'm' in args.model:
print('Parsing medulla LPU data')
n_dict_med, s_dict_med = LPU.lpu_parser(MED_GEXF_FILE)
print('Initializing medulla LPU')
lpu_med = LPU(dt, n_dict_med, s_dict_med,
input_file=MED_INPUT,
output_file=MED_OUTPUT_FILE, port_ctrl=port_ctrl,
port_data=port_data, device=args.med_dev, id='medulla',
debug=True)
man.add_mod(lpu_med)
# if gexf files are not written again,
# patterns are loaded from previous files too
from_file = not args.gexf
print('Connecting retina and lamina')
eyemodel.connect_retina_lamina(man, lpu_ret, lpu_lam, from_file)
print('Connecting lamina and medulla')
eyemodel.connect_lamina_medulla(man, lpu_lam, lpu_med, from_file)
print('Starting simulation')
start_time = time.time()
man.start(steps=args.steps)
man.stop()
print('Simulation complete: Duration {} seconds'.format(time.time() -
start_time))
if args.output:
V = vis.visualizer()
n_dict_lam, s_dict_lam = LPU.lpu_parser(LAM_GEXF_FILE)
print('Initializing lamina LPU')
lpu_lam = LPU(dt,
n_dict_lam,
s_dict_lam,
input_file=None,
output_file=LAM_OUTPUT_FILE,
port_ctrl=port_ctrl,
port_data=port_data,
device=args.lam_dev,
id='lamina',
debug=False)
man.add_mod(lpu_lam)
print('Connecting retina and lamina')
eyemodel.connect_retina_lamina(man, lpu_ret, lpu_lam)
print('Starting simulation')
start_time = time.time()
man.start(steps=args.steps)
man.stop()
print('Simulation complete: Duration {} seconds'.format(time.time() -
start_time))
if args.output:
eyemodel.visualise_output(media_file=RET_OUTPUT_MPEG,
model_output=RET_OUTPUT_GPOT,
config={
'LPU': 'retina',
'type': args.video_type
n_dict_med,
s_dict_med,
input_file=MED_INPUT,
output_file=MED_OUTPUT_FILE,
port_ctrl=port_ctrl,
port_data=port_data,
device=args.med_dev,
id='medulla',
debug=True)
man.add_mod(lpu_med)
# if gexf files are not written again,
# patterns are loaded from previous files too
from_file = not args.gexf
print('Connecting retina and lamina')
eyemodel.connect_retina_lamina(man, lpu_ret, lpu_lam, from_file)
print('Connecting lamina and medulla')
eyemodel.connect_lamina_medulla(man, lpu_lam, lpu_med, from_file)
print('Starting simulation')
start_time = time.time()
man.start(steps=args.steps)
man.stop()
print('Simulation complete: Duration {} seconds'.format(time.time() -
start_time))
if args.output:
V = vis.visualizer()
