def jobzip(self, job, **jobargs):
from disco.util import iskv
from disco.worker.classic.modutil import find_modules
jobzip = super(Worker, self).jobzip(job, **jobargs)
def get(key):
return self.getitem(key, job, jobargs)
if isinstance(get('required_files'), dict):
for path, bytes in get('required_files').iteritems():
jobzip.writestr(path, bytes)
else:
for path in get('required_files'):
jobzip.write(path, os.path.join('lib', os.path.basename(path)))
if get('required_modules') is None:
self['required_modules'] = find_modules([obj
for key in self
for obj in util.iterify(get(key))
if callable(obj)],
exclude=['Task'])
for mod in get('required_modules'):
if iskv(mod):
jobzip.writepath(mod[1])
for func in ('map', 'reduce'):
if isinstance(get(func), dict):
for path, bytes in get(func).iteritems():
jobzip.writestr(os.path.join('ext.%s' % func, path), bytes)
return jobzip
def run(self, task, job, **jobargs):
# Entry point into the executing pipeline worker task. This
# initializes the task environment, sets up the current stage,
# and then executes it.
worker.active_task = task
for key in self:
self[key] = self.getitem(key, job, jobargs)
sys_version = '{0[0]}.{0[1]}'.format(sys.version_info[:2])
assert self['version'] == sys_version, "Python version mismatch"
# Set up the task environment.
globals_ = globals().copy()
for module in self['required_modules']:
name = module[0] if util.iskv(module) else module
globals_[name.split('.')[-1]] = __import__(name, fromlist=[name])
for obj in util.flatten(self.values()):
util.globalize(obj, globals_)
# Set up the stage.
params = self.getitem('params', job, jobargs, worker.Params())
pipeline = dict([(s.name, (idx, s))
for idx, (g, s) in enumerate(self['pipeline'])])
pipe_idx, stage = pipeline[task.stage]
stage.taskinfo = TaskInfo(jobname=task.jobname,
host=task.host,
stage=task.stage,
group=task.group,
label=task.group_label)
if not stage.input_chain:
stage.input_chain = Stage.default_input_chain(pipe_idx)
if not stage.output_chain:
stage.output_chain = Stage.default_output_chain
# And now run it.
self.run_stage(task, stage, params)
def jobzip(self, job, **jobargs):
"""
A hook provided by the :class:`Worker` for creating the
:term:`job home` zip. The base implementation creates a
minimal zip file containing the Disco standard library, and
any user-specified required files and modules.
:return: a :class:`disco.fileutils.DiscoZipFile`.
"""
# First, add the disco standard library.
from clx import __file__ as clxpath
from disco import __file__ as discopath
from disco.fileutils import DiscoZipFile
jobzip = DiscoZipFile()
jobzip.writepath(os.path.dirname(clxpath), exclude=('.pyc', '__pycache__'))
jobzip.writepath(os.path.dirname(discopath), exclude=('.pyc', '__pycache__'))
jobzip.writesource(job)
jobzip.writesource(self)
# Then, add any user-specified required files.
from disco.util import iskv
def get(key):
return self.getitem(key, job, jobargs)
if isinstance(get('required_files'), dict):
for path, bytes in get('required_files').items():
jobzip.writestr(path, bytes)
else:
for path in get('required_files'):
jobzip.write(path, os.path.join('lib', os.path.basename(path)))
if get('required_modules') is None:
self['required_modules'] = self.get_modules(job, **jobargs)
for mod in get('required_modules'):
if iskv(mod):
jobzip.writepath(mod[1])
# Done with basic minimal zip.
return jobzip
def pack(self):
"""Pack up the :class:`JobDict` for sending over the wire."""
jobpack = {}
if self['required_files']:
if not isinstance(self['required_files'], dict):
self['required_files'] = util.pack_files(self['required_files'])
else:
self['required_files'] = {}
self['required_files'].update(util.pack_files(
o[1] for o in self['required_modules'] if util.iskv(o)))
for key in self.defaults:
if key == 'input':
jobpack['input'] = ' '.join(
'\n'.join(reversed(list(util.iterify(url))))
for url in self['input'])
elif key in ('nr_reduces', 'prefix'):
jobpack[key] = str(self[key])
elif key == 'scheduler':
scheduler = self['scheduler']
for key in scheduler:
jobpack['sched_%s' % key] = str(scheduler[key])
elif self[key] is None:
pass
elif key in self.stacks:
jobpack[key] = util.pack_stack(self[key])
else:
jobpack[key] = util.pack(self[key])
return encode_netstring_fd(jobpack)
def run(self, task, job, **jobargs):
# Entry point into the executing pipeline worker task. This
# initializes the task environment, sets up the current stage,
# and then executes it.
for key in self:
self[key] = self.getitem(key, job, jobargs)
sys_version = '{0[0]}.{0[1]}'.format(sys.version_info[:2])
assert self['version'] == sys_version, "Python version mismatch"
# Set up the task environment.
globals_ = globals().copy()
for module in self['required_modules']:
name = module[0] if util.iskv(module) else module
globals_[name.split('.')[-1]] = __import__(name, fromlist=[name])
for obj in util.flatten(self.values()):
util.globalize(obj, globals_)
# Set up the stage.
params = self.getitem('params', job, jobargs, worker.Params())
pipeline = dict([(s.name, (idx, s))
for idx, (g, s) in enumerate(self['pipeline'])])
pipe_idx, stage = pipeline[task.stage]
stage.taskinfo = TaskInfo(jobname=task.jobname, host=task.host,
stage=task.stage, group=task.group,
label=task.group_label)
if not stage.input_chain:
stage.input_chain = Stage.default_input_chain(pipe_idx)
if not stage.output_chain:
stage.output_chain = Stage.default_output_chain
# And now run it.
self.run_stage(task, stage, params)
def jobzip(self, job, **jobargs):
"""
A hook provided by the :class:`Worker` for creating the
:term:`job home` zip. The base implementation creates a
minimal zip file containing the Disco standard library, and
any user-specified required files and modules.
:return: a :class:`disco.fileutils.DiscoZipFile`.
"""
# First, add the disco standard library.
from clx import __file__ as clxpath
from disco import __file__ as discopath
from disco.fileutils import DiscoZipFile
jobzip = DiscoZipFile()
jobzip.writepath(os.path.dirname(clxpath), exclude=('.pyc', '__pycache__'))
jobzip.writepath(os.path.dirname(discopath), exclude=('.pyc', '__pycache__'))
jobzip.writesource(job)
jobzip.writesource(self)
# Then, add any user-specified required files.
from disco.util import iskv
def get(key):
return self.getitem(key, job, jobargs)
if isinstance(get('required_files'), dict):
for path, bytes in get('required_files').items():
jobzip.writestr(path, bytes)
else:
for path in get('required_files'):
jobzip.write(path, os.path.join('lib', os.path.basename(path)))
if get('required_modules') is None:
self['required_modules'] = self.get_modules(job, **jobargs)
for mod in get('required_modules'):
if iskv(mod):
jobzip.writepath(mod[1])
# Done with basic minimal zip.
return jobzip
def jobzip(self, job, **jobargs):
from disco.util import iskv
from disco.worker.classic.modutil import find_modules
jobzip = super(Worker, self).jobzip(job, **jobargs)
def get(key):
return self.getitem(key, job, jobargs)
if isinstance(get('required_files'), dict):
for path, bytes in get('required_files').items():
jobzip.writestr(path, bytes)
else:
for path in get('required_files'):
jobzip.write(path, os.path.join('lib', os.path.basename(path)))
if get('required_modules') is None:
self['required_modules'] = find_modules([
obj for key in self
for obj in util.iterify(get(key)) if callable(obj)
],
exclude=['Task'])
for mod in get('required_modules'):
if iskv(mod):
jobzip.writepath(mod[1])
for func in ('map', 'reduce'):
if isinstance(get(func), dict):
for path, bytes in get(func).items():
jobzip.writestr(os.path.join('ext.{0}'.format(func), path),
bytes)
return jobzip
def insert_globals(self, functions):
for fn in functions:
if isinstance(fn, functools.partial):
fn=fn.func
if isinstance(fn, FunctionType):
fn.func_globals.setdefault('Task', self)
for module in self.required_modules:
mod_name = module[0] if util.iskv(module) else module
mod = __import__(mod_name, fromlist=[mod_name])
fn.func_globals.setdefault(mod_name.split('.')[-1], mod)
def insert_globals(self, functions):
write_files(self.required_files, self.lib)
sys.path.insert(0, self.lib)
for fn in functions:
if isinstance(fn, partial):
fn = fn.func
if isinstance(fn, FunctionType):
fn.func_globals.setdefault('Task', self)
for module in self.required_modules:
mod_name = module[0] if util.iskv(module) else module
mod = __import__(mod_name, fromlist=[mod_name])
fn.func_globals.setdefault(mod_name.split('.')[-1], mod)
def run(self, task, job, **jobargs):
global Task
Task = task
for key in self:
self[key] = self.getitem(key, job, jobargs)
assert self['version'] == '%s.%s' % sys.version_info[:2], "Python version mismatch"
params = self['params']
if isinstance(self[task.mode], dict):
params = self['ext_params']
self[task.mode] = external.prepare(params, task.mode)
globals_ = globals().copy()
for module in self['required_modules']:
name = module[0] if util.iskv(module) else module
globals_[name.split('.')[-1]] = __import__(name, fromlist=[name])
for obj in util.flatten(self.values()):
util.globalize(obj, globals_)
getattr(self, task.mode)(task, params)
external.close()
def run(self, task, job, **jobargs):
global Task
Task = task
for key in self:
self[key] = self.getitem(key, job, jobargs)
assert self['version'] == '{0[0]}.{0[1]}'.format(sys.version_info[:2]), "Python version mismatch"
params = self['params']
if isinstance(self[task.stage], dict):
params = self['ext_params']
self[task.stage] = external.prepare(params, task.stage)
globals_ = globals().copy()
for module in self['required_modules']:
name = module[0] if util.iskv(module) else module
globals_[name.split('.')[-1]] = __import__(name, fromlist=[name])
for obj in util.flatten(self.values()):
util.globalize(obj, globals_)
getattr(self, task.stage)(task, params)
external.close()
def pack(self):
"""Pack up the :class:`JobDict` for sending over the wire."""
jobpack = {}
if self['required_files']:
if not isinstance(self['required_files'], dict):
self['required_files'] = util.pack_files(
self['required_files'])
else:
self['required_files'] = {}
self['required_files'].update(
util.pack_files(o[1] for o in self['required_modules']
if util.iskv(o)))
for key in self.defaults:
if key in ('map', 'reduce'):
if self[key] is None:
continue
if key == 'input':
jobpack['input'] = ' '.join(
'\n'.join(reversed(list(util.iterify(url))))
for url in self['input'])
elif key == 'username':
jobpack['username'] = str(self['username'])
elif key in ('nr_reduces', 'prefix'):
jobpack[key] = str(self[key])
elif key == 'scheduler':
scheduler = self['scheduler']
for key in scheduler:
jobpack['sched_%s' % key] = str(scheduler[key])
elif key in self.stacks:
jobpack[key] = util.pack_stack(self[key])
else:
jobpack[key] = util.pack(self[key])
return encode_netstring_fd(jobpack)
def kvify(entry):
yield entry if iskv(entry) else ('', entry)
def evaluate(expression, entry):
if iskv(entry):
k, v = entry
yield eval(expression)
def where(predicate, entry):
if iskv(entry):
k, v = entry
if eval(predicate):
yield entry
