def load(collections, parent=None):
"""Create new collection."""
for data in collections or []:
collection = Collection(name=data['name'],
dbquery=data.get('dbquery'),
parent=parent)
db.session.add(collection)
db.session.flush()
load(data.get('children'), parent=collection)
def load_records(app, filename, schema, tries=5):
"""Try to index records."""
indexer = RecordIndexer()
records = []
with app.app_context():
with mock.patch("invenio_records.api.Record.validate",
return_value=None):
data_filename = pkg_resources.resource_filename(
"invenio_records", filename)
records_data = load(data_filename)
with db.session.begin_nested():
for item in records_data:
record_id = uuid.uuid4()
item_dict = dict(marc21.do(item))
item_dict["$schema"] = schema
recid_minter(record_id, item_dict)
oaiid_minter(record_id, item_dict)
record = current_oaiserver.record_cls.create(item_dict,
id_=record_id)
indexer.index(record)
records.append(record.id)
db.session.commit()
# Wait for indexer to finish
for i in range(tries):
response = current_search_client.search()
if response["hits"]["total"] >= len(records):
break
current_search.flush_and_refresh("_all")
return records
def records():
"""Load demo records."""
from dojson.contrib.marc21.utils import load
from dojson.contrib.marc21.model import marc21
from invenio_db import db
from invenio_records import Record
class NoCheckRecord(Record):
"""Skip record validation."""
def validate(self):
"""Ignore schema."""
return True
schema = current_app.extensions['invenio-jsonschemas'].path_to_url(
'marc21/bibliographic/bd-v1.0.0.json')
data = pkg_resources.resource_filename('cernopendata_fixtures', 'data')
files = list(glob.glob(os.path.join(data, '*.xml')))
files += list(glob.glob(os.path.join(data, '*', '*.xml')))
for filename in files:
with open(filename, 'rb') as source:
for data in load(source):
record = marc21.do(data)
record['$schema'] = schema
click.echo(NoCheckRecord.create(record).id)
db.session.commit()
db.session.expunge_all()
def load_records(app, filename, schema, tries=5):
"""Try to index records."""
indexer = RecordIndexer()
records = []
with app.app_context():
with mock.patch('invenio_records.api.Record.validate',
return_value=None):
data_filename = pkg_resources.resource_filename(
'invenio_records', filename)
records_data = load(data_filename)
with db.session.begin_nested():
for item in records_data:
record_id = uuid.uuid4()
item_dict = dict(marc21.do(item))
item_dict['$schema'] = schema
recid_minter(record_id, item_dict)
oaiid_minter(record_id, item_dict)
record = Record.create(item_dict, id_=record_id)
indexer.index(record)
records.append(record.id)
db.session.commit()
# Wait for indexer to finish
for i in range(tries):
response = current_search_client.search()
if response['hits']['total'] >= len(records):
break
sleep(5)
return records
def test_marc21_loader():
"""Test MARC21 loader."""
COLLECTION = '<collection>{0}{1}</collection>'.format(
RECORD, RECORD_SIMPLE)
records = list(load(BytesIO(COLLECTION.encode('utf-8'))))
assert len(records) == 2
def load_records(app, filename, schema, tries=5):
"""Try to index records."""
indexer = RecordIndexer()
records = []
with app.app_context():
with mock.patch('invenio_records.api.Record.validate',
return_value=None):
data_filename = pkg_resources.resource_filename(
'invenio_records', filename)
records_data = load(data_filename)
with db.session.begin_nested():
for item in records_data:
record_id = uuid.uuid4()
item_dict = dict(marc21.do(item))
item_dict['$schema'] = schema
recid_minter(record_id, item_dict)
oaiid_minter(record_id, item_dict)
record = Record.create(item_dict, id_=record_id)
indexer.index(record)
records.append(record.id)
db.session.commit()
# Wait for indexer to finish
for i in range(tries):
response = current_search_client.search()
if response['hits']['total'] >= len(records):
break
current_search.flush_and_refresh('_all')
return records
def import_records(dojson_model, schema, xmlfile):
"""Helper to import a MARCXML file for given schema."""
ids = []
from invenio_pidstore import current_pidstore
with db.session.begin_nested():
with open(xmlfile, 'rb') as fp:
for item in load(fp):
# Transform MARCXML to JSON
data = dojson_model.do(item)
# TODO: Add schema once schema validation has been fixed.
# Schema
# data['$schema'] = schema
# Create a UUID for the record
id_ = uuid.uuid4()
# FIXME: Strip off control number otherwise minter will fail.
if 'control_number' in data:
del data['control_number']
# Mint a recid and OAI id.
pid = current_pidstore.minters['recid'](id_, data)
current_pidstore.minters['oaiid'](id_, data)
# Store record.
record = Record.create(data, id_=id_)
click.echo('Created record {}'.format(pid.pid_value))
ids.append(id_)
return ids
def test_xslt_not_found():
"""Test xslt not found."""
runner = CliRunner()
with runner.isolated_filesystem():
with open('record.xml', 'wb') as f:
f.write(RECORD_SIMPLE.encode('utf-8'))
data = list(load('record.xml'))
pytest.raises(IOError, dumps, data, xslt_filename='file_not_exist')
def test_xslt_not_found():
"""Test xslt not found."""
runner = CliRunner()
with runner.isolated_filesystem():
with open('record.xml', 'wb') as f:
f.write(RECORD_SIMPLE.encode('utf-8'))
data = list(load('record.xml'))
pytest.raises(IOError, dumps, data, xslt_filename='file_not_exist')
def test_xslt_dump():
"""Test xslt dump."""
path = os.path.dirname(__file__)
with open("{0}/demo_marc21_to_dc.converted.xml".format(path)) as myfile:
expect = myfile.read()
data = list(load("{0}/demo_marc21_to_dc.xml".format(path)))
output = dumps(data, xslt_filename="{0}/demo_marc21_to_dc.xslt".format(path))
assert output.decode("utf-8") == expect
def test_marc21_loader():
"""Test MARC21 loader."""
COLLECTION = '<collection>{0}{1}</collection>'.format(
RECORD, RECORD_SIMPLE
)
records = list(load(BytesIO(COLLECTION.encode('utf-8'))))
assert len(records) == 2
def test_xslt_not_found():
"""Test xslt not found."""
runner = CliRunner()
with runner.isolated_filesystem():
with open("record.xml", "wb") as f:
f.write(RECORD_SIMPLE.encode("utf-8"))
data = list(load("record.xml"))
pytest.raises(IOError, dumps, data, xslt_filename="file_not_exist")
def test_entry_points():
"""Test entry points."""
dump = list(pkg_resources.iter_entry_points("dojson.cli.dump", "marcxml"))[0].load()
path = os.path.dirname(__file__)
with open("{0}/demo_marc21_to_dc.converted.xml".format(path)) as myfile:
expect = myfile.read()
data = list(load("{0}/demo_marc21_to_dc.xml".format(path)))
output = dump(data, xslt_filename="{0}/demo_marc21_to_dc.xslt".format(path))
assert output.decode("utf-8") == expect
def collections():
"""Load default collections."""
from invenio_db import db
from invenio_collections.models import Collection
from .fixtures import COLLECTIONS
def load(collections, parent=None):
"""Create new collection."""
for data in collections or []:
collection = Collection(name=data['name'],
dbquery=data.get('dbquery'),
parent=parent)
db.session.add(collection)
db.session.flush()
load(data.get('children'), parent=collection)
load(COLLECTIONS)
db.session.commit()
def test_xslt_dump():
"""Test xslt dump."""
path = os.path.dirname(__file__)
with open('{0}/demo_marc21_to_dc.converted.xml'.format(path)) as myfile:
expect = myfile.read()
data = list(load('{0}/demo_marc21_to_dc.xml'.format(path)))
output = dumps(
data,
xslt_filename='{0}/demo_marc21_to_dc.xslt'.format(path)
)
assert output.decode('utf-8') == expect
def test_output_type_from_dumps_etree():
"""Test output type from dumps_etree."""
path = os.path.dirname(__file__)
data = list(load("{0}/demo_marc21_to_dc.xml".format(path)))
# test without arguments
output1 = dumps_etree(data)
# test with xslt_filename argument
output2 = dumps_etree(data, xslt_filename="{0}/demo_marc21_to_dc.xslt".format(path))
# it should not generate a TypeError exception
assert isinstance(output1, _Element)
assert isinstance(output2, _Element)
def test_entry_points():
"""Test entry points."""
dump = list(pkg_resources.iter_entry_points('dojson.cli.dump',
'marcxml'))[0].load()
path = os.path.dirname(__file__)
with open("{0}/demo_marc21_to_dc.converted.xml".format(path)) as myfile:
expect = myfile.read().replace('\n', '')
data = list(load('{0}/demo_marc21_to_dc.xml'.format(path)))
output = dump(data,
xslt_filename='{0}/demo_marc21_to_dc.xslt'.format(path))
assert output.decode('utf-8') == expect
def test_marc21_loader():
"""Test MARC21 loader."""
from six import BytesIO
from dojson.contrib.marc21.utils import load
COLLECTION = '<collection>{0}{1}</collection>'.format(
RECORD, RECORD_SIMPLE
)
records = list(load(BytesIO(COLLECTION.encode('utf-8'))))
assert len(records) == 2
def test_entry_points():
"""Test entry points."""
dump = list(pkg_resources.iter_entry_points(
'dojson.cli.dump', 'marcxml'
))[0].load()
path = os.path.dirname(__file__)
with open("{0}/demo_marc21_to_dc.converted.xml".format(path)) as myfile:
expect = myfile.read()
data = list(load('{0}/demo_marc21_to_dc.xml'.format(path)))
output = dump(data,
xslt_filename='{0}/demo_marc21_to_dc.xslt'.format(path))
assert output.decode('utf-8') == expect
def test_output_type_from_dumps_etree():
"""Test output type from dumps_etree."""
path = os.path.dirname(__file__)
data = list(load('{0}/demo_marc21_to_dc.xml'.format(path)))
# test without arguments
output1 = dumps_etree(data)
# test with xslt_filename argument
output2 = dumps_etree(
data,
xslt_filename='{0}/demo_marc21_to_dc.xslt'.format(path)
)
# it should not generate a TypeError exception
assert isinstance(output1, _Element)
assert isinstance(output2, _Element)
def load_records(es_app, filename, schema):
"""Try to index records."""
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename("invenio_records", filename)
records_data = load(data_filename)
records = []
for item in records_data:
item_dict = dict(marc21.do(item))
item_dict["$schema"] = schema
record = Record.create(item_dict)
records.append(record)
db.session.commit()
es_records = []
for record in records:
es_records.append(indexer.index(record))
for record in es_records:
search.client.get(index=record["_index"], doc_type=record["_type"], id=record["_id"])
def test_bibliographic_data(es_app):
"""Test indexation using bibliographic data."""
search = InvenioSearch(es_app)
search.create()
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename(
'invenio_records', 'data/marc21/bibliographic.xml')
records_data = load(data_filename)
records = []
for item in records_data:
record = Record.create(item)
record['$schema'] = "mappings/marc21_holdings.json"
es_record = indexer.index(record)
records.append(es_record)
for record in records:
search.client.get(index=record['_index'],
doc_type=record['_type'],
id=record['_id'])
search.delete()
def test_bibliographic_data(es_app):
"""Test indexation using bibliographic data."""
search = InvenioSearch(es_app)
search.create()
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename(
'invenio_records', 'data/marc21/bibliographic.xml')
records_data = load(data_filename)
records = []
for item in records_data:
record = Record.create(item)
record['$schema'] = "mappings/marc21_holdings.json"
es_record = indexer.index(record)
records.append(es_record)
for record in records:
search.client.get(index=record['_index'],
doc_type=record['_type'],
id=record['_id'])
search.delete()
def load_records(es_app, filename, schema):
"""Try to index records."""
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename(
'invenio_records', filename)
records_data = load(data_filename)
records = []
for item in records_data:
item_dict = dict(marc21.do(item))
item_dict['$schema'] = schema
record = Record.create(item_dict)
records.append(record)
db.session.commit()
es_records = []
for record in records:
es_records.append(indexer.index(record))
for record in es_records:
search.client.get(index=record['_index'],
doc_type=record['_type'],
id=record['_id'])
def load_records(es_app, filename, schema):
"""Try to index records."""
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename(
'invenio_records', filename)
records_data = load(data_filename)
records = []
for item in records_data:
item_dict = dict(marc21.do(item))
item_dict['$schema'] = schema
record = Record.create(item_dict)
records.append(record)
db.session.commit()
es_records = []
for record in records:
es_records.append(indexer.index(record))
from invenio_search import current_search
for record in es_records:
current_search.client.get(index=record['_index'],
doc_type=record['_type'],
id=record['_id'])
def load_records(es_app, filename, schema):
"""Try to index records."""
indexer = RecordIndexer()
with es_app.test_request_context():
data_filename = pkg_resources.resource_filename("invenio_records", filename)
records_data = load(data_filename)
records = []
for item in records_data:
item_dict = dict(marc21.do(item))
item_dict["$schema"] = schema
record = Record.create(item_dict)
records.append(record)
db.session.commit()
es_records = []
for record in records:
es_records.append(indexer.index(record))
from invenio_search import current_search
for record in es_records:
current_search.client.get(
index=record["_index"], doc_type=record["_type"], id=record["_id"]
)