def test_tags_missing_tags():
config, tags = init('f')
find = 'hdf_structure'
replace = 'hdf_tags'
mod.replace_text_in_file(config, find, replace)
hdf.verify(config, data_file)
time.sleep(1)
assert res.is_text_in_file(logfile, '/exchange/missing')
assert res.is_text_in_file(logfile, '/exchange/missing1')
clean()
def test_struct_missing_tags_attrib():
config, tags = init('h')
hdf.verify(config, data_file)
time.sleep(1)
assert res.is_text_in_file(logfile, '/exchange/missing')
assert res.is_text_in_file(logfile, '/exchange/missing1')
assert res.is_text_in_file(logfile, 'should be axes:theta_dark:y:x')
assert res.is_text_in_file(logfile, 'should be axes:theta_white:y:x')
assert res.is_text_in_file(logfile, 'attributes are missing in tag /exchange/theta')
clean()
def test_tags_missing_tags():
config, tags = init('f')
find = 'hdf_structure'
replace = 'hdf_tags'
mod.replace_text_in_file(config, find, replace)
hdf.verify(config, data_file)
time.sleep(1)
assert res.is_text_in_file(logfile, '/exchange/missing')
assert res.is_text_in_file(logfile, '/exchange/missing1')
clean()
def test_struct_missing_tags_attrib():
config, tags = init('h')
hdf.verify(config, data_file)
time.sleep(1)
assert res.is_text_in_file(logfile, '/exchange/missing')
assert res.is_text_in_file(logfile, '/exchange/missing1')
assert res.is_text_in_file(logfile, 'should be axes:theta_dark:y:x')
assert res.is_text_in_file(logfile, 'should be axes:theta_white:y:x')
assert res.is_text_in_file(
logfile, 'attributes are missing in tag /exchange/theta')
clean()
def test_bad_file():
config, tags = init('e')
data_file = "data/test_datax.h5"
# the file.verify will exit with -1
try:
hdf.verify(config, data_file)
except:
pass
time.sleep(1)
assert res.is_text_in_file(logfile, 'parameter error: file data/test_datax.h5 does not exist')
clean()
def test_bad_file():
config, tags = init('e')
data_file = "data/test_datax.h5"
# the file.verify will exit with -1
try:
hdf.verify(config, data_file)
except:
pass
time.sleep(1)
assert res.is_text_in_file(
logfile, 'parameter error: file data/test_datax.h5 does not exist')
clean()
def test_conf_error_no_schema():
config, tags = init('a')
find = 'schema'
replace = 'schemax'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(logfile, 'configuration error: schema is not configured')
clean()
def test_no_schema():
config, tags = init('b')
find = 'tags'
replace = 'tagsx'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(logfile, 'configuration error: file test/schemas/tagsxb.json does not exist')
clean()
def test_bad_type():
config, tags = init('d')
find = 'hdf_structure'
replace = 'hdf_structurex'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(logfile, 'configured verification type hdf_structurex is not supported')
clean()
def test_conf_error_no_type():
config, tags = init('c')
find = 'verification_type'
replace = 'verification_typex'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(logfile, 'config error: verification type not configured')
clean()
def test_conf_error_no_type():
config, tags = init('c')
find = 'verification_type'
replace = 'verification_typex'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(
logfile, 'config error: verification type not configured')
clean()
def test_conf_error_no_schema():
config, tags = init('a')
find = 'schema'
replace = 'schemax'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(
logfile, 'configuration error: schema is not configured')
clean()
def test_bad_type():
config, tags = init('d')
find = 'hdf_structure'
replace = 'hdf_structurex'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(
logfile,
'configured verification type hdf_structurex is not supported')
clean()
def test_no_schema():
config, tags = init('b')
find = 'tags'
replace = 'tagsx'
mod.replace_text_in_file(config, find, replace)
# the file.verify will exit with -1
try:
hdf.verify(config, None)
except:
pass
time.sleep(1)
assert res.is_text_in_file(
logfile,
'configuration error: file test/schemas/tagsxb.json does not exist')
clean()
def hdf(conf, fname):
"""
HDF file structure verifier.
Parameters
----------
conf : str
configuration file name, including path
file : str
File Name to verify including path
Returns
-------
boolean
"""
if dqhdf.verify(conf, fname):
print('All tags exist and meet conditions')
else:
print(
'Some of the tags do not exist or do not meet conditions, check log file'
)
def test_tags_no_missing_tags():
config, tags = init('g')
find = 'hdf_structure'
replace = 'hdf_tags'
mod.replace_text_in_file(config, find, replace)
match = 'missing'
mod.delete_line_in_file(tags, match)
time.sleep(1)
assert (hdf.verify(config, data_file))
assert res.is_text_in_file(logfile, 'All required tags exist')
clean()
def test_tags_no_missing_tags():
config, tags = init('g')
find = 'hdf_structure'
replace = 'hdf_tags'
mod.replace_text_in_file(config, find, replace)
match = 'missing'
mod.delete_line_in_file(tags, match)
time.sleep(1)
assert (hdf.verify(config, data_file))
assert res.is_text_in_file(logfile, 'All required tags exist')
clean()
def test_struct_no_missing():
config, tags = init('i')
match = 'missing'
mod.delete_line_in_file(tags, match)
match = 'axes'
mod.delete_line_in_file(tags, match)
match = 'degrees'
mod.delete_line_in_file(tags, match)
assert (hdf.verify(config, data_file))
time.sleep(1)
assert res.is_text_in_file(logfile, 'All required tags exist and meet conditions')
clean
def test_struct_no_missing():
config, tags = init('i')
match = 'missing'
mod.delete_line_in_file(tags, match)
match = 'axes'
mod.delete_line_in_file(tags, match)
match = 'degrees'
mod.delete_line_in_file(tags, match)
assert (hdf.verify(config, data_file))
time.sleep(1)
assert res.is_text_in_file(logfile,
'All required tags exist and meet conditions')
clean
def hdf(conf, fname):
"""
HDF file structure verifier.
Parameters
----------
conf : str
configuration file name, including path
file : str
File Name to verify including path
Returns
-------
boolean
"""
if dqhdf.verify(conf, fname):
print("All tags exist and meet conditions")
else:
print("Some of the tags do not exist or do not meet conditions, check log file")