def build_and_install_software(module, options, origEnviron, exitOnFailure=True, silent=False):
"""
Build the software
"""
spec = module['spec']
print_msg("processing EasyBuild easyconfig %s" % spec, log=_log, silent=silent)
# restore original environment
_log.info("Resetting environment")
filetools.errorsFoundInLog = 0
modify_env(os.environ, origEnviron)
cwd = os.getcwd()
# load easyblock
easyblock = options.easyblock
if not easyblock:
# try to look in .eb file
reg = re.compile(r"^\s*easyblock\s*=(.*)$")
txt = read_file(spec)
for line in txt.split('\n'):
match = reg.search(line)
if match:
easyblock = eval(match.group(1))
break
name = module['module'][0]
try:
app_class = get_class(easyblock, name=name)
app = app_class(spec, debug=options.debug, robot_path=options.robot)
_log.info("Obtained application instance of for %s (easyblock: %s)" % (name, easyblock))
except EasyBuildError, err:
print_error("Failed to get application instance for %s (easyblock: %s): %s" % (name, easyblock, err.msg), silent=silent)
def build_and_install_software(module, options, origEnviron, exitOnFailure=True, silent=False):
"""
Build the software
"""
spec = module['spec']
print_msg("processing EasyBuild easyconfig %s" % spec, log=_log, silent=silent)
# restore original environment
_log.info("Resetting environment")
filetools.errorsFoundInLog = 0
modify_env(os.environ, origEnviron)
cwd = os.getcwd()
# load easyblock
easyblock = options.easyblock
if not easyblock:
# try to look in .eb file
reg = re.compile(r"^\s*easyblock\s*=(.*)$")
txt = read_file(spec)
for line in txt.split('\n'):
match = reg.search(line)
if match:
easyblock = eval(match.group(1))
break
name = module['module'][0]
try:
app_class = get_class(easyblock, name=name)
app = app_class(spec, debug=options.debug, robot_path=options.robot)
_log.info("Obtained application instance of for %s (easyblock: %s)" % (name, easyblock))
except EasyBuildError, err:
print_error("Failed to get application instance for %s (easyblock: %s): %s" % (name, easyblock, err.msg), silent=silent)
base_dir = os.getcwd()
base_env = copy.deepcopy(os.environ)
succes = []
for app in apps:
# if initialisation step failed, app will be None
if app:
applog = os.path.join(output_dir, "%s-%s.log" % (app.name, app.get_installversion()))
start_time = time.time()
# start with a clean slate
os.chdir(base_dir)
modify_env(os.environ, base_env)
steps = EasyBlock.get_steps(iteration_count=app.det_iter_cnt())
for (step_name, _, step_methods, skippable) in steps:
if skippable and step_name in app.cfg["skipsteps"]:
_log.info("Skipping step %s" % step_name)
else:
for step_method in step_methods:
method_name = "_".join(step_method.func_code.co_names)
perform_step("_".join([step_name, method_name]), app, step_method, applog)
# close log and move it
app.close_log()
try:
# retain old logs
base_dir = os.getcwd()
base_env = copy.deepcopy(os.environ)
succes = []
for app in apps:
# if initialisation step failed, app will be None
if app:
applog = os.path.join(output_dir, "%s-%s.log" % (app.name, app.get_installversion()))
start_time = time.time()
# start with a clean slate
os.chdir(base_dir)
modify_env(os.environ, base_env)
steps = EasyBlock.get_steps(iteration_count=app.det_iter_cnt())
for (step_name, _, step_methods, skippable) in steps:
if skippable and step_name in app.cfg['skipsteps']:
_log.info("Skipping step %s" % step_name)
else:
for step_method in step_methods:
method_name = '_'.join(step_method.func_code.co_names)
perform_step('_'.join([step_name, method_name]), app, step_method, applog)
# close log and move it
app.close_log()
try:
# retain old logs
