def AddPV_row(self):
i = self.npv_rows = self.npv_rows + 1
panel = self.pvpanel
sizer = self.pvsizer
pvchoice = MyChoice(panel, choices=self.pvlist, size=(150, -1))
pvchoice.SetSelection(0)
logs = MyChoice(panel, size=(50, -1))
logs.SetSelection(0)
ymin = wx.TextCtrl(panel, -1, '', size=(75, -1))
ymax = wx.TextCtrl(panel, -1, '', size=(75, -1))
desc = wx.TextCtrl(panel, -1, '', size=(150, -1))
side = MyChoice(panel,
choices=('left', 'right'),
action=self.onSide,
size=(80, -1))
side.SetSelection((i - 1) % 2)
if i > 2:
logs.Disable()
ymin.Disable()
ymax.Disable()
desc.Disable()
side.Disable()
colval = (0, 0, 0)
if i < len(self.default_colors):
colval = self.default_colors[i]
colr = csel.ColourSelect(panel, -1, '', colval)
self.colorsels.append(colr)
sizer.Add(pvchoice, (i, 0), (1, 1), LSTY, 3)
sizer.Add(colr, (i, 1), (1, 1), CSTY, 3)
sizer.Add(logs, (i, 2), (1, 1), CSTY, 3)
sizer.Add(ymin, (i, 3), (1, 1), CSTY, 3)
sizer.Add(ymax, (i, 4), (1, 1), CSTY, 3)
sizer.Add(desc, (i, 5), (1, 1), CSTY, 3)
sizer.Add(side, (i, 6), (1, 1), CSTY, 3)
pvchoice.Bind(wx.EVT_CHOICE, Closure(self.onPVchoice, row=i))
colr.Bind(csel.EVT_COLOURSELECT, Closure(self.onPVcolor, row=i))
logs.Bind(wx.EVT_CHOICE, self.onPVwid)
ymin.Bind(wx.EVT_TEXT_ENTER, self.onPVwid)
ymax.Bind(wx.EVT_TEXT_ENTER, self.onPVwid)
self.pvchoices.append(pvchoice)
self.pvlabels.append(desc)
self.pvwids.append((logs, colr, ymin, ymax, desc, side))
def group_panel(self,
parent,
label='Fine Stages',
precision=3,
collapseable=False,
add_buttons=None,
group='fine'):
"""make motor group panel """
motors = self.motorgroups[group]
is_xy = motors[1] is not None
if collapseable:
cpane = CP.PyCollapsiblePane(parent, agwStyle=wx.CP_GTK_EXPANDER)
cpane.Bind(wx.EVT_COLLAPSIBLEPANE_CHANGED,
Closure(self.onCollapse, panel=cpane, label=label))
cpane.Collapse(True)
cpane.SetFont(wx.Font(11, wx.SWISS, wx.NORMAL, wx.BOLD, False))
cpane.SetLabel('Show %s' % label)
panel = cpane.GetPane()
else:
panel = wx.Panel(parent)
self.tweaks[group] = NumericCombo(panel,
self.tweaklist[group],
precision=precision,
init=3)
slabel = wx.BoxSizer(wx.HORIZONTAL)
slabel.Add(wx.StaticText(panel, label=" %s: " % label, size=(150, -1)),
1, wx.EXPAND | LEFT_BOT)
slabel.Add(self.tweaks[group], 0, ALL_EXP | LEFT_TOP)
smotor = wx.BoxSizer(wx.VERTICAL)
smotor.Add(slabel, 0, ALL_EXP)
for mnam in motors:
if mnam is None: continue
self.motorwids[mnam] = MotorPanel(panel, label=mnam, psize='small')
self.motorwids[mnam].desc.SetLabel(mnam)
smotor.Add(self.motorwids[mnam], 0, ALL_EXP | LEFT_TOP)
if add_buttons is not None:
for label, action in add_buttons:
smotor.Add(add_button(panel, label, action=action))
btnbox = self.make_button_panel(panel, full=is_xy, group=group)
btnbox_style = CEN_BOT
if is_xy:
btnbox_style = CEN_TOP
sizer = wx.BoxSizer(wx.HORIZONTAL)
sizer.Add(smotor, 0, ALL_EXP | LEFT_TOP)
sizer.Add(btnbox, 0, btnbox_style, 1)
pack(panel, sizer)
if collapseable:
return cpane
return panel
def onSave(self, name):
if len(name) < 1:
return
if name in self.positions and self.viewer.v_replace:
ret = popup(self, "Overwrite Position %s?" % name,
"Veriry Overwrite Position",
style=wx.YES_NO|wx.NO_DEFAULT|wx.ICON_QUESTION)
if ret != wx.ID_YES:
return
imgfile = '%s.jpg' % time.strftime('%b%d_%H%M%S')
imgfile = os.path.join(self.viewer.imgdir, imgfile)
tmp_pos = self.viewer.ctrlpanel.read_position()
imgdata, count = None, 0
if not os.path.exists(self.viewer.imgdir):
os.makedirs(self.viewer.imgdir)
while imgdata is None and count <100:
imgdata = self.viewer.save_image(imgfile)
if imgdata is None:
time.sleep(0.5)
count = count + 1
imgdata['source'] = 'SampleStage'
imgdata['data_format'] = 'file'
imgdata.pop('data')
notes = json.dumps(imgdata)
fullpath = os.path.join(os.getcwd(), imgfile)
self.positions[name] = {'image': fullpath,
'timestamp': time.strftime('%b %d %H:%M:%S'),
'position': tmp_pos,
'notes': notes}
if name not in self.pos_list.GetItems():
self.pos_list.Append(name)
self.instdb.save_position(self.instname, name, tmp_pos,
notes=notes, image=fullpath)
self.pos_list.SetStringSelection(name)
# auto-save file
self.viewer.autosave(positions=self.positions)
self.viewer.write_htmllog(name, self.positions[name])
imgfile_exists = False
t0 = time.time()
if not imgfile_exists and time.time()-t0 < 10:
imgfile_exists = os.path.exists(fullpath)
time.sleep(0.5)
if imgfile_exists:
self.viewer.write_message("Saved Position '%s', image in %s" %
(name, imgfile))
else:
self.viewer.write_message("COULD NOT SAVE IMAGE FILE!!")
wx.CallAfter(Closure(self.onSelect, event=None, name=name))
def _btn(name):
img = images[name].GetImage()
btn = wx.BitmapButton(panel,
-1,
wx.BitmapFromImage(img),
style=wx.NO_BORDER)
btn.Bind(wx.EVT_BUTTON, Closure(self.onMove,
group=group,
name=name))
return btn
def onSavePosition(self, event=None):
name = event.GetString().strip()
if self.v_replace and name in self.config['positions']:
ret = popup(self,
"Overwrite Position %s?" % name,
"Veriry Overwrite Position",
style=wx.YES_NO | wx.NO_DEFAULT | wx.ICON_QUESTION)
if ret != wx.ID_YES:
return
imgfile = '%s.jpg' % time.strftime('%b%d_%H%M%S')
fname = "%s/%s" % (self.imgdir, imgfile)
self.waiting_for_imagefile = True
self.save_image(fname=fname)
tmp_pos = []
for v in self.config['stages'].values():
tmp_pos.append(float(self.motors[v['label']].VAL))
self.positions[name] = {
'image': imgfile,
'timestamp': time.strftime('%b %d %H:%M:%S'),
'position': tmp_pos
}
if name not in self.pos_list.GetItems():
self.pos_list.Append(name)
self.pos_name.Clear()
self.pos_list.SetStringSelection(name)
# auto-save file
self.config['positions'] = self.positions
self.autosave()
self.write_htmllog(name)
self.write_message("Saved Position '%s', image in %s" % (name, fname))
wx.CallAfter(Closure(self.onSelectPosition, event=None, name=name))
def __init__(self,
parent,
image_panel=None,
camera_id=0,
center_cb=None,
xhair_cb=None,
**kws):
super(ConfPanel_Fly2, self).__init__(parent,
center_cb=center_cb,
xhair_cb=xhair_cb)
self.image_panel = image_panel
self.camera_id = camera_id
self.camera = self.image_panel.camera
wids = self.wids
sizer = self.sizer
self.title = self.txt("PyCapture2: ", size=285)
self.title2 = self.txt(" ", size=285)
sizer.Add(self.title, (0, 0), (1, 3), LEFT)
sizer.Add(self.title2, (1, 0), (1, 3), LEFT)
next_row = self.show_position_info(row=2)
self.__initializing = True
i = next_row + 1
#('Sharpness', '%', 100), ('Hue', 'deg', 100), ('Saturation', '%', 100),
for dat in (
('shutter', 'ms', 50, 0, 70),
('gain', 'dB', 0, -2, 24),
# ('brightness', '%', 0, 0, 6),
('gamma', '', 1, 0.5, 4)):
key, units, defval, minval, maxval = dat
wids[key] = FloatCtrl(self,
value=defval,
minval=minval,
maxval=maxval,
precision=1,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': key},
size=(75, -1))
label = '%s' % (key.title())
if len(units) > 0:
label = '%s (%s)' % (key.title(), units)
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids[key], (i, 1), (1, 1), LEFT)
akey = '%s_auto' % key
wids[akey] = wx.CheckBox(self, -1, label='auto')
wids[akey].SetValue(0)
wids[akey].Bind(wx.EVT_CHECKBOX, Closure(self.onAuto, prop=key))
sizer.Add(wids[akey], (i, 2), (1, 1), LEFT)
i = i + 1
for color in ('blue', 'red'):
key = 'wb_%s' % color
wids[key] = FloatCtrl(self,
value=0,
maxval=1024,
precision=0,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': key},
size=(75, -1))
label = 'White Balance (%s)' % (color)
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids[key], (i, 1), (1, 1), LEFT)
if color == 'blue':
akey = 'wb_auto'
wids[akey] = wx.CheckBox(self, -1, label='auto')
wids[akey].SetValue(0)
wids[akey].Bind(wx.EVT_CHECKBOX, Closure(self.onAuto,
prop=key))
sizer.Add(wids[akey], (i, 2), (1, 1), LEFT)
i += 1
datapush_time = "%.1f" % self.image_panel.datapush_delay
wids['dpush_time'] = FloatCtrl(self,
value=datapush_time,
maxval=1e6,
precision=1,
minval=0,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': 'autosave_time'},
size=(75, -1))
label = 'AutoSave Time (sec)'
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids['dpush_time'], (i, 1), (1, 1), LEFT)
# wids['datapush'].SetValue(1)
# wids['datapush'].Bind(wx.EVT_CHECKBOX, self.onEnableDataPush)
# sizer.Add(wids['datapush'], (i+1, 0), (1, 3), LEFT)
pack(self, sizer)
self.__initializing = False
self.timer = wx.Timer(self)
self.Bind(wx.EVT_TIMER, self.onTimer, self.timer)
wx.CallAfter(self.onConnect)
def create_menus(self):
"Create the menubar"
mbar = wx.MenuBar()
fmenu = wx.Menu()
pmenu = wx.Menu()
omenu = wx.Menu()
add_menu(self,
fmenu,
label="&Read Config",
text="Read Configuration",
action=self.onReadConfig)
add_menu(self,
fmenu,
label="&Save Config",
text="Save Configuration",
action=self.onSaveConfig)
add_menu(self,
fmenu,
label="Show Projections\tCtrl+G",
text="Start Projection Plots",
action=self.onStartProjections)
add_menu(self,
fmenu,
label="Print Blurriness\tCtrl+B",
text="print blurriness",
action=self.onReportBlurry)
add_menu(self,
fmenu,
label="Stop Projection\tCtrl+C",
text="Stop Projection Plots",
action=self.onStopProjections)
add_menu(self,
fmenu,
label="Select &Working Directory\tCtrl+W",
text="change Working Folder",
action=self.onChangeWorkdir)
if self.cam_type.startswith('area'):
add_menu(self,
fmenu,
label="Change AreaDetector",
text="Change Camera to different AreaDetector",
action=self.onChangeCamera)
fmenu.AppendSeparator()
add_menu(self,
fmenu,
label="E&xit\tCtrl+x",
text="Quit Program",
action=self.onClose)
add_menu(self,
pmenu,
label="Export Positions",
text="Export Positions",
action=self.onExportPositions)
add_menu(self,
pmenu,
label="Import Positions",
text="Import Positions",
action=self.onImportPositions)
add_menu(self,
pmenu,
label="Erase Many Positions\tCtrl+E",
text="Select Multiple Positions to Erase",
action=self.onEraseMany)
add_menu(self,
omenu,
label="Image Overlays",
text="Setup Image Overlays",
action=self.onConfigOverlays)
vmove = wx.NewId()
verase = wx.NewId()
vreplace = wx.NewId()
cenfine = wx.NewId()
self.menu_opts = {
vmove: 'v_move',
verase: 'v_erase',
vreplace: 'v_replace',
cenfine: 'center_with_fine_stages'
}
mitem = omenu.Append(vmove, "Verify Go To ",
"Prompt to Verify Moving with 'Go To'",
wx.ITEM_CHECK)
mitem.Check()
self.Bind(wx.EVT_MENU, self.onMenuOption, mitem)
mitem = omenu.Append(verase, "Verify Erase",
"Prompt to Verify Erasing Positions",
wx.ITEM_CHECK)
mitem.Check()
self.Bind(wx.EVT_MENU, self.onMenuOption, mitem)
mitem = omenu.Append(vreplace, "Verify Overwrite",
"Prompt to Verify Overwriting Positions",
wx.ITEM_CHECK)
mitem.Check()
self.Bind(wx.EVT_MENU, self.onMenuOption, mitem)
mitem = omenu.Append(cenfine, "Center With Fine Stages",
"Bring to Center will move the Fine Stages",
wx.ITEM_CHECK)
mitem.Check(0)
self.Bind(wx.EVT_MENU, self.onMenuOption, mitem)
omenu.AppendSeparator()
# print( 'Create Menus ', self.ctrlpanel.subpanels)
# for key, val in self.config['stages'].items():
# print( key, val)
for name, panel in self.ctrlpanel.subpanels.items():
show = 0
label = 'Enable %s' % name
mid = wx.NewId()
self.menu_opts[mid] = label
for mname, data in self.config['stages'].items():
if data['group'] == name:
show = show + data['show']
mitem = omenu.Append(mid, label, label, wx.ITEM_CHECK)
if show > 0:
mitem.Check()
self.Bind(wx.EVT_MENU,
Closure(self.onShowHide, name=name, panel=panel), mitem)
mbar.Append(fmenu, '&File')
mbar.Append(omenu, '&Options')
mbar.Append(pmenu, 'Positions')
if len(self.config['scandb'].get('offline', '')):
cmenu = wx.Menu()
# add_menu(self, cmenu, label="Calibrate Microscope",
# text="Calibrate to Offline Microscope",
# action = self.pospanel.onMicroscopeCalibrate)
add_menu(self,
cmenu,
label="Copy Positions from Offline Microscope",
text="Copy Positions from Offline Microscope",
action=self.pospanel.onMicroscopeTransfer)
mbar.Append(cmenu, 'Offline Microscope')
self.SetMenuBar(mbar)
def __init__(self,
parent,
image_panel=None,
camera_id=0,
center_cb=None,
xhair_cb=None,
**kws):
super(ConfPanel_PySpin, self).__init__(parent,
center_cb=center_cb,
xhair_cb=xhair_cb,
**kws)
self.image_panel = image_panel
self.camera_id = camera_id
self.camera = self.image_panel.camera
wids = self.wids
sizer = self.sizer
with_color_conv = False
self.title = self.txt("PySpinnaker: ", size=285)
self.title2 = self.txt(" ", size=285)
self.title3 = self.txt(" ", size=285)
btn_start = add_button(self,
"Restart Camera",
action=self.onRestart,
size=(250, -1))
next_row = self.show_position_info(row=0)
sizer.Add(self.title, (next_row, 0), (1, 3), LEFT)
sizer.Add(self.title2, (next_row + 1, 0), (1, 3), LEFT)
sizer.Add(self.title3, (next_row + 2, 0), (1, 3), LEFT)
self.__initializing = True
i = next_row + 3
for dat in (('exposure', 'ms', 50, 0.03, MAX_EXPOSURE_TIME),
('gain', 'dB', 5, 0, 40)):
# ('gamma', '', 1, 0.5, 4)):
key, units, defval, minval, maxval = dat
wids[key] = FloatCtrl(self,
value=defval,
minval=minval,
maxval=maxval,
precision=2,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': key},
size=(75, -1))
label = '%s' % (key.title())
if len(units) > 0:
label = '%s (%s)' % (key.title(), units)
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids[key], (i, 1), (1, 1), LEFT)
if key != 'gamma':
akey = '%s_auto' % key
wids[akey] = wx.CheckBox(self, -1, label='auto')
wids[akey].SetValue(0)
wids[akey].Bind(wx.EVT_CHECKBOX, Closure(self.onAuto,
prop=key))
sizer.Add(wids[akey], (i, 2), (1, 1), LEFT)
i = i + 1
for color in ('blue', 'red'):
key = 'wb_%s' % color
wids[key] = FloatCtrl(self,
value=0,
minval=0.3,
maxval=4,
precision=3,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': key},
size=(75, -1))
wids[key].Disable()
label = 'White Balance (%s)' % (color)
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids[key], (i, 1), (1, 1), LEFT)
if color == 'blue':
akey = 'wb_auto'
wids[akey] = wx.CheckBox(self, -1, label='auto')
wids[akey].SetValue(0)
wids[akey].Bind(wx.EVT_CHECKBOX, Closure(self.onAuto,
prop=key))
sizer.Add(wids[akey], (i, 2), (1, 1), LEFT)
i += 1
datapush_time = "%.1f" % self.image_panel.datapush_delay
wids['dpush_time'] = FloatCtrl(self,
value=datapush_time,
maxval=1e6,
precision=1,
minval=0,
action=self.onValue,
act_on_losefocus=True,
action_kw={'prop': 'autosave_time'},
size=(75, -1))
label = 'AutoSave Time (sec)'
sizer.Add(self.txt(label), (i, 0), (1, 1), LEFT)
sizer.Add(wids['dpush_time'], (i, 1), (1, 1), LEFT)
i = i + 1
sizer.Add(btn_start, (i, 0), (1, 2), LEFT)
if with_color_conv:
conv_choices = ('DEFAULT', 'NO_COLOR_PROCESSING',
'NEAREST_NEIGHBOR', 'EDGE_SENSING', 'HQ_LINEAR',
'RIGOROUS', 'IPP', 'DIRECTIONAL_FILTER',
'WEIGHTED_DIRECTIONAL_FILTER')
wids['color_conv'] = wx.Choice(self,
-1,
choices=conv_choices,
size=(150, -1))
wids['color_conv'].Bind(wx.EVT_CHOICE, self.onColorConv)
i += 1
sizer.Add(self.txt('Conversion: '), (i, 0), (1, 1), LEFT)
sizer.Add(wids['color_conv'], (i, 1), (1, 1), LEFT)
# wids['datapush'].SetValue(1)
# wids['datapush'].Bind(wx.EVT_CHECKBOX, self.onEnableDataPush)
# sizer.Add(wids['datapush'], (i+1, 0), (1, 3), LEFT)
pack(self, sizer)
self.__initializing = False
self.read_props_timer = wx.Timer(self)
self.Bind(wx.EVT_TIMER, self.onTimer, self.read_props_timer)
wx.CallAfter(self.onConnect)
def arrow(self, panel, group, name):
"bitmap button"
bitmap = Bitmap(icons[name].GetImage())
b = wx.BitmapButton(panel, -1, bitmap, style=wx.NO_BORDER)
b.Bind(wx.EVT_BUTTON, Closure(self.onMove, group=group, name=name))
return b