def requires(self) -> List[luigi.Task]:
return [
self.project, # I2B2 project
SqlScriptTask(script=self.script, param_vars=self.variables),
SqlScriptTask(script=Script.cdm_harvest_init,
param_vars=self.variables)
]
def requires(self) -> List[luigi.Task]:
return [
self.project, # I2B2 project
SqlScriptTask(script=self.script,
param_vars=self.variables),
HarvestInit.script_with_vars(self.variables)
]
def run(self) -> None:
SqlScriptTask.run_bound(self, script_params=dict(chunk_qty=str(self.patient_chunks)))
def run(self) -> None:
SqlScriptTask.run_bound(self, script_params=dict(
patient_num_first=self.patient_num_first, patient_num_last=self.patient_num_last))
def script_with_vars(self, variables: Environment) -> SqlScriptTask:
return SqlScriptTask(script=self.script,
param_vars=variables)
def run(self) -> None:
SqlScriptTask.run_bound(self,
script_params=dict(chunk_qty=self.bene_chunks))
def requires(self) -> List[luigi.Task]:
return SqlScriptTask.requires(self) + self.mappings
def run(self) -> None:
SqlScriptTask.run_bound(self, script_params=dict(chunk_qty=str(self.patient_chunks)))
def run(self) -> None:
SqlScriptTask.run_bound(self, script_params=dict(
patient_num_first=self.patient_num_first, patient_num_last=self.patient_num_last))