def param_train_fn(space, train_set):
return xgb_classification_learner(
features=["x"],
target="target",
learning_rate=space["learning_rate"],
num_estimators=space["num_estimators"])(train_set)
def test_xgb_classification_learner():
df_train_binary = pd.DataFrame({
'id': ["id1", "id2", "id3", "id4"],
'x1': [10.0, 13.0, 10.0, 13.0],
"x2": [0, 1, 1, 0],
"w": [2, 1, 2, 0.5],
'y': [0, 1, 0, 1]
})
df_test_binary = pd.DataFrame({
'id': ["id4", "id4", "id5", "id6"],
'x1': [12.0, 1000.0, -4.0, 0.0],
"x2": [1, 1, 0, 1],
"w": [1, 2, 0, 0.5],
'y': [1, 0, 0, 1]
})
df_train_multinomial = pd.DataFrame({
'id': ["id1", "id2", "id3", "id4", "id3", "id4"],
'x1': [10.0, 13.0, 10.0, 13.0, 10.0, 13.0],
"x2": [0, 1, 1, 0, 1, 0],
"w": [2, 1, 2, 0.5, 2, 0.5],
'y': [0, 1, 2, 1, 2, 0]
})
df_test_multinomial = pd.DataFrame({
'id': ["id4", "id4", "id5", "id6", "id5", "id6"],
'x1': [12.0, 1000.0, -4.0, 0.0, -4.0, 0.0],
"x2": [1, 1, 0, 1, 0, 1],
"w": [1, 2, 0, 0.5, 0, 0.5],
'y': [1, 2, 0, 1, 2, 0]
})
features = ["x1", "x2"]
learner_binary = xgb_classification_learner(features=features,
target="y",
learning_rate=0.1,
num_estimators=20,
extra_params={"max_depth": 4, "seed": 42},
prediction_column="prediction",
weight_column="w")
predict_fn_binary, pred_train_binary, log = learner_binary(df_train_binary)
pred_test_binary = predict_fn_binary(df_test_binary)
expected_col_train = df_train_binary.columns.tolist() + ["prediction"]
expected_col_test = df_test_binary.columns.tolist() + ["prediction"]
assert Counter(expected_col_train) == Counter(pred_train_binary.columns.tolist())
assert Counter(expected_col_test) == Counter(pred_test_binary.columns.tolist())
assert pred_test_binary.prediction.max() < 1
assert pred_test_binary.prediction.min() > 0
assert (pred_test_binary.columns == pred_train_binary.columns).all()
# SHAP test (binary only)
pred_shap = predict_fn_binary(df_test_binary, apply_shap=True)
assert "shap_values" in pred_shap.columns
assert "shap_expected_value" in pred_shap.columns
assert np.vstack(pred_shap["shap_values"]).shape == (4, 2)
# test multinomial case
learner_multinomial = xgb_classification_learner(features=features,
target="y",
learning_rate=0.1,
num_estimators=20,
extra_params={"max_depth": 2,
"seed": 42,
"objective": 'multi:softprob',
"num_class": 3},
prediction_column="prediction")
predict_fn_multinomial, pred_train_multinomial, log = learner_multinomial(df_train_multinomial)
pred_test_multinomial = predict_fn_multinomial(df_test_multinomial)
expected_col_train = df_train_binary.columns.tolist() + ["prediction_0", "prediction_1", "prediction_2",
"prediction"]
expected_col_test = df_test_binary.columns.tolist() + ["prediction_0", "prediction_1", "prediction_2",
"prediction"]
assert Counter(expected_col_train) == Counter(pred_train_multinomial.columns.tolist())
assert Counter(expected_col_test) == Counter(pred_test_multinomial.columns.tolist())
assert (pred_test_multinomial.columns == pred_train_multinomial.columns).all()
def xgb_octopus_classification_learner(
train_set: pd.DataFrame,
learning_rate_by_bin: Dict[T, float],
num_estimators_by_bin: Dict[T, int],
extra_params_by_bin: Dict[T, Dict[str, Any]],
features_by_bin: Dict[T, List[str]],
train_split_col: str,
train_split_bins: List,
nthread: int,
target_column: str,
prediction_column: str = "prediction") -> LearnerReturnType:
"""
Octopus ensemble allows you to inject domain specific knowledge to force a split in an initial feature, instead of
assuming the tree model will do that intelligent split on its own. It works by first defining a split on your
dataset and then training one individual model in each separated dataset.
Parameters
----------
train_set: pd.DataFrame
A Pandas' DataFrame with features, target columns and a splitting column that must be categorical.
learning_rate_by_bin: dict
A dictionary of learning rate in the XGBoost model to use in each model split. Ex: if you want to
split your training by tenure and you have a tenure column with integer values [1,2,3,...,12], you have to
specify a list of learning rates for each split::
{
1: 0.08,
2: 0.08,
...
12: 0.1
}
num_estimators_by_bin: dict
A dictionary of number of tree estimators in the XGBoost model to use in each model split. Ex: if you want to
split your training by tenure and you have a tenure column with integer values [1,2,3,...,12], you have to
specify a list of estimators for each split::
{
1: 300,
2: 250,
...
12: 300
}
extra_params_by_bin: dict
A dictionary of extra parameters dictionaries in the XGBoost model to use in each model split. Ex: if you want
to split your training by tenure and you have a tenure column with integer values [1,2,3,...,12], you have to
specify a list of extra parameters for each split::
{
1: {
'reg_alpha': 0.0,
'colsample_bytree': 0.4,
...
'colsample_bylevel': 0.8
}
2: {
'reg_alpha': 0.1,
'colsample_bytree': 0.6,
...
'colsample_bylevel': 0.4
}
...
12: {
'reg_alpha': 0.0,
'colsample_bytree': 0.7,
...
'colsample_bylevel': 1.0
}
}
features_by_bin: dict
A dictionary of features to use in each model split. Ex: if you want to split your training by tenure and you
have a tenure column with integer values [1,2,3,...,12], you have to specify a list of features for each split::
{
1: [feature-1, feature-2, feature-3, ...],
2: [feature-1, feature-3, feature-5, ...],
...
12: [feature-2, feature-4, feature-8, ...]
}
train_split_col: str
The name of the categorical column where the model will make the splits. Ex: if you want to split your training
by tenure, you can have a categorical column called "tenure".
train_split_bins: list
A list with the actual values of the categories from the `train_split_col`. Ex: if you want to split your
training by tenure and you have a tenure column with integer values [1,2,3,...,12] you can pass this list and
you will split your training into 12 different models.
nthread: int
Number of threads for the XGBoost learners.
target_column: str
The name of the target column.
prediction_column: str
The name of the column with the predictions from the model.
"""
train_fns = {
b: xgb_classification_learner(
features=features_by_bin[b],
learning_rate=learning_rate_by_bin[b],
num_estimators=num_estimators_by_bin[b],
target=target_column,
extra_params=assoc(extra_params_by_bin[b], 'nthread', nthread),
prediction_column=prediction_column + "_bin_" + str(b))
for b in train_split_bins
}
train_sets = {
b: train_set[train_set[train_split_col] == b]
for b in train_split_bins
}
train_results = {b: train_fns[b](train_sets[b]) for b in train_split_bins}
# train_results is a 3-tuple (prediction functions, predicted train dataset, train logs)
pred_fns = {b: train_results[b][0] for b in train_split_bins}
train_logs = {b: train_results[b][2] for b in train_split_bins}
def p(df: pd.DataFrame) -> pd.DataFrame:
pred_fn = compose(*pred_fns.values())
return (pred_fn(df).assign(
pred_bin=prediction_column + "_bin_" +
df[train_split_col].astype(str)).assign(
prediction=lambda d: d.lookup(
d.index.values, d.pred_bin.values.squeeze())).rename(
index=str, columns={
"prediction": prediction_column
}).drop("pred_bin", axis=1))
p.__doc__ = learner_pred_fn_docstring("xgb_octopus_classification_learner")
log = {
'xgb_octopus_classification_learner': {
'features': features_by_bin,
'target': target_column,
'prediction_column': prediction_column,
'package': "xgboost",
'train_logs': train_logs,
'parameters': extra_params_by_bin,
'training_samples': len(train_set)
}
}
return p, p(train_set), log