def test_get_events_as_data_frame_comp(self):
fcs_file_path = "examples/test_comp_example.fcs"
comp_file_path = "examples/comp_complete_example.csv"
sample = Sample(fcs_path_or_data=fcs_file_path,
compensation=comp_file_path)
df = sample.as_dataframe(source='comp')
self.assertIsInstance(df, pd.DataFrame)
np.testing.assert_equal(df.values, sample.get_comp_events())
def test_load_from_pandas_multi_index(self):
sample_orig = Sample("examples/data/100715.fcs",
cache_original_events=True)
pnn_orig = sample_orig.pnn_labels
pns_orig = sample_orig.pns_labels
df = sample_orig.as_dataframe(source='orig')
sample_new = Sample(df)
pnn_new = sample_new.pnn_labels
pns_new = sample_new.pns_labels
self.assertListEqual(pnn_orig, pnn_new)
self.assertListEqual(pns_orig, pns_new)