def testIsInt(x):
sys.path.append('../project/sugarlabs-calculate-sugar-0.94')
from functions import is_int
try:
output = is_int(x)
except:
output = "Fail"
return output
def get_commits_sizes(user: str, repo: str, shas: list) -> list:
commits_sizes = []
for sha in shas:
url = '/'.join([git_api_base, user, repo, "git/trees", str(sha)])
try:
result = requests.get(url)
data = json.loads(result.text)
tree = str(data).split("'tree':")[1]
sizes_in_tree = tree.split("'size':")
tree_sizes = []
for size in sizes_in_tree:
value = size.split(',')[0]
if is_int(value):
tree_sizes.append(int(value))
commits_sizes.append(sum(tree_sizes))
except Exception as e:
print(str(e))
return commits_sizes
def Check_Options(self):
functions.globstring = "./GenCoF-master/Sickle/sickle-master/sickle"
errors = ''
if (self.var_se_pe.get() == "Paired-end"):
functions.args_se_pe(self.var_se_pe.get())
if (self.var_g.get()):
functions.args_se_and_pe_non_man("-g", "")
if (self.var_reverse_file == ''):
if ((".fastq" not in self.var_filename
and ".fq" not in self.var_filename)
or self.var_filename == ''):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.file_input_inter(self.var_filename)
if (self.var_qual.get() != "Pick Quality Type"):
functions.quality_vals(self.var_qual.get())
else:
errors += "Enter quality type\n"
if (self.var_m.get()):
if (self.var_g.get()):
if (self.var_out_file.get() == '' or
self.var_out_file.get() == 'Output Filename'):
functions.inter_big_m('TRIMMED_OUTPUT.fastq.gz')
elif (".fastq" not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.inter_big_m(self.var_out_file.get() +
'.gz')
else:
if (self.var_out_file.get() == '' or
self.var_out_file.get() == 'Output Filename'):
functions.inter_big_m('TRIMMED_OUTPUT.fastq')
elif (".fastq" not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.inter_big_m(self.var_out_file.get())
else:
if (self.var_g.get()):
if (self.var_out_file.get() == '' or
self.var_out_file.get() == 'Output Filename'):
functions.inter_m('TRIMMED_OUTPUT.fastq.gz')
elif (".fastq" not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.inter_m(self.var_out_file.get() + '.gz')
if (self.var_singles.get() == ''
or self.var_singles.get()
== 'Trimmed Singles Filename'):
functions.trimmed('TRIMMED_SINGLES.fastq.gz')
elif (".fastq" not in self.var_singles.get()
and ".fq" not in self.var_singles.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.trimmed(self.var_singles.get() + '.gz')
else:
if (self.var_out_file.get() == '' or
self.var_out_file.get() == 'Output Filename'):
functions.inter_m('TRIMMED_OUTPUT.fastq')
elif (".fastq" not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.inter_m(self.var_out_file.get())
if (self.var_singles.get() == ''
or self.var_singles.get()
== 'Trimmed Singles Filename'):
functions.trimmed('TRIMMED_SINGLES.fastq')
elif (".fastq" not in self.var_singles.get()
and ".fq" not in self.var_singles.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.trimmed(self.var_singles.get())
else:
if ((".fastq" not in self.var_filename
and ".fq" not in self.var_filename)
or (self.var_filename == '')):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.file_input(self.var_filename)
if (".fastq" not in self.var_reverse_file
and ".fq" not in self.var_reverse_file):
errors += "Enter file with .fastq or .fq appended to the end or clear contents of reverse entry\n"
else:
functions.file_rev_input(self.var_reverse_file)
if (self.var_qual.get() != "Pick Quality Type"):
functions.quality_vals(self.var_qual.get())
else:
errors += "Enter quality value\n"
if (self.var_g.get()):
if (self.var_out_file.get() == ''
or self.var_out_file.get() == 'Output Filename'):
functions.output('TRIMMED_OUTPUT.fastq.gz')
elif ('.fastq' not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output(self.var_out_file.get() + '.gz')
else:
if (self.var_out_file.get() == ''
or self.var_out_file.get() == 'Output Filename'):
functions.output('TRIMMED_OUTPUT.fastq')
elif ('.fastq' not in self.var_out_file.get()
and ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output(self.var_out_file.get())
if (self.var_g.get()):
if (self.var_reverse_output.get() == ''
or self.var_reverse_output.get()
== 'Trimmed PE Reverse Output Filename'):
functions.output_rev('TRIMMED_OUTPUT_REV.fastq.gz')
elif (".fastq" not in self.var_reverse_output.get()
and ".fq" not in self.var_reverse_output.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output_rev(self.var_reverse_output.get() +
'.gz')
else:
if (self.var_reverse_output.get() == ''
or self.var_reverse_output.get()
== 'Trimmed PE Reverse Output Filename'):
functions.output_rev('TRIMMED_OUTPUT_REV.fastq')
elif (".fastq" not in self.var_reverse_output.get()
and ".fq" not in self.var_reverse_output.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output_rev(self.var_reverse_output.get())
if (self.var_g.get()):
if (self.var_singles.get() == '' or self.var_singles.get()
== 'Trimmed Singles Filename'):
functions.trimmed('TRIMMED_SINGLES.fastq.gz')
elif (".fastq" not in self.var_singles.get()
and ".fq" not in self.var_singles.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.trimmed(self.var_singles.get() + '.gz')
else:
if (self.var_singles.get() == '' or self.var_singles.get()
== 'Trimmed Singles Filename'):
functions.trimmed('TRIMMED_SINGLES.fastq')
elif (".fastq" not in self.var_singles.get()
and ".fq" not in self.var_singles.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.trimmed(self.var_singles.get())
elif (self.var_se_pe.get() == "Single-end "):
functions.args_se_pe(self.var_se_pe.get())
if ((".fastq" not in self.var_filename
and ".fq" not in self.var_filename)
or (self.var_filename == '')):
errors += "Pick file with .fastq or .fq appended to the end\n"
else:
functions.file_input(self.var_filename)
if (self.var_qual.get() != "Pick Quality Type"):
functions.quality_vals(self.var_qual.get())
else:
errors += "Enter quality value\n"
if (self.var_g.get()):
if (self.var_out_file.get() == ''
or self.var_out_file.get() == 'Output Filename'):
functions.output('TRIMMED_OUTPUT.fastq.gz')
elif (".fastq" not in self.var_out_file.get()
or ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output(self.var_out_file.get() + '.gz')
else:
if (self.var_out_file.get() == ''
or self.var_out_file.get() == 'Output Filename'):
functions.output('TRIMMED_OUTPUT.fastq')
elif (".fastq" not in self.var_out_file.get()
or ".fq" not in self.var_out_file.get()):
errors += "Enter file with .fastq or .fq appended to the end\n"
else:
functions.output(self.var_out_file.get())
else:
errors += "Enter SE or PE\n"
if (functions.is_int(self.var_q_num.get())):
functions.args_se_and_pe_non_man("-q", int(self.var_q_num.get()))
if (functions.is_int(self.var_L_num.get())):
functions.args_se_and_pe_non_man("-l", int(self.var_L_num.get()))
if (self.var_x.get()):
functions.args_se_and_pe_non_man("-x", "")
if (self.var_n.get()):
functions.args_se_and_pe_non_man("-n", "")
self.err_message.config(text="Running....", font="Times 18")
self.update()
if (errors == ''):
cmd_line = shlex.split(functions.globstring)
if ('sickle'
in os.listdir('./GenCoF-master/Sickle/sickle-master/')):
subprocess.call([
'chmod', '+x',
'./GenCoF-master/Sickle/sickle-master/sickle'
])
p = subprocess.Popen(cmd_line,
stdout=subprocess.PIPE,
stderr=subprocess.PIPE)
result, error = p.communicate()
if (error.decode('utf-8') == ''):
self.err_message.config(text="OUTPUT: \n" +
result.decode('utf-8'),
font="Times 18")
else:
self.err_message.config(text='\nERRORS: \n' +
error.decode('utf-8'),
font="Times 18")
elif ('sickle'
not in os.listdir('./GenCoF-master/Sickle/sickle-master/')
and 'Makefile'
in os.listdir('./GenCoF-master/Sickle/sickle-master/')):
subprocess.call(
["make", "-C", "./GenCoF-master/Sickle/sickle-master/"])
p = subprocess.Popen(cmd_line,
stdout=subprocess.PIPE,
stderr=subprocess.PIPE)
result, error = p.communicate()
if (error.decode('utf-8') == ''):
self.err_message.config(text="\n" + result.decode('utf-8'),
font="Times 18")
else:
self.err_message.config(text='\n' + error.decode('utf-8'),
font="Times 18")
else:
self.err_message.config(
text="ERRORS: \n makefile not in correct directory",
fg='dark red',
font="Times 18")
else:
self.err_message.config(text=('ERRORS: \n' + errors),
fg='dark red',
font="Times 18")
return
def on_chat_message(msg):
global model_choice_store
content_type, chat_type, chat_id = telepot.glance(msg)
input_data = msg['text']
if chat_id in model_choice_store:
model_choice = model_choice_store[chat_id]
else:
model_choice = None
if input_data == '/start':
keyboard = InlineKeyboardMarkup(
inline_keyboard=[[
InlineKeyboardButton(text=u'Прогноз добычи "сланцевой" нефти',
callback_data='shale')
],
[
InlineKeyboardButton(
text=u'ВИЭ Европы',
callback_data='renewables')
]])
TelegramBot.sendMessage(
chat_id,
u'Выберите модель. Для изменения выбора нажмите /start или другую кнопку',
reply_markup=keyboard)
elif model_choice == 'shale':
input_data = input_data.split(
) # введённый текст переделываем в массив
if input_data[0][:1] == '/':
input_data[0] = input_data[0][1:] # обрезаем слеш
if is_int(input_data[0]) is True and is_float(input_data[1]) is True:
input_data = list(map(float,
input_data)) # сценарии буровых в float
input_data[0] = int(input_data[0]) # месяцы в int
draw_shale(input_data) # запуск модели с входными параметрами
time.sleep(1)
TelegramBot.sendPhoto(chat_id,
open('chart_shale.png',
'rb')) # отправка графика в чат
else:
TelegramBot.sendMessage(chat_id,
'Shale oil forecast: Wrong arguments')
elif model_choice == 'renewables':
input_data = input_data.split(
) # введённый текст переделываем в массив
if input_data[0][:1] == '/':
input_data[0] = input_data[0][1:] # обрезаем слеш
if is_int(input_data[0]) is True and is_float(input_data[1]) is True and is_float(input_data[2]) is True and is_float(input_data[2]) is True \
and len(input_data) == 4:
print 'renew entered'
input_data = list(map(float,
input_data)) # сценарии буровых в float
month = int(input_data[0] - 1)
start_date = month * 30.4
end_date = start_date + 30.4
wind_multiplier = [input_data[1]]
solar_multiplier = [input_data[2]]
capacity_storage = [input_data[3]]
input_data[0] = int(input_data[0]) # месяцы в int
draw_renew(1, wind_multiplier, solar_multiplier, capacity_storage,
wind_price, solar_price, gas_price, price_kwh_storage,
discount_rate_storage, years_storage, start_date,
end_date) # запуск модели с входными параметрами
time.sleep(1)
TelegramBot.sendPhoto(chat_id,
open('chart_renew.png',
'rb')) # отправка графика в чат
else:
TelegramBot.sendMessage(chat_id,
'Europe renewables: Wrong arguments')
# Will print a message in preparation for testing of the function
def prep_msg(func):
print("Beginning testing of the " + func + " function...")
# Total number of test cases per function: 4
# Total number of functions: 8
# Total number of test cases: 32 test cases
total_test = 32
total_passed = 0
# Testing is_int() function
prep_msg("is_int()")
if functions.is_int(1):
pass_msg(test_Case_msg("1", "is_int()"))
total_passed += 1
else:
err_msg(test_Case_msg("1", "is_int()"))
if not functions.is_int(3.14):
pass_msg(test_Case_msg("2", "is_int()"))
total_passed += 1
else:
err_msg(test_Case_msg("2", "is_int()"))
if not functions.is_int("Hello!"):
pass_msg(test_Case_msg("3", "is_int()"))
total_passed += 1
else: