def readsGenerator(self, request):
"""
Returns a generator over the (read, nextPageToken) pairs defined
by the specified request
"""
if not request.reference_id:
raise exceptions.UnmappedReadsNotSupported()
if len(request.read_group_ids) < 1:
raise exceptions.BadRequestException(
"At least one readGroupId must be specified")
elif len(request.read_group_ids) == 1:
return self._readsGeneratorSingle(request)
else:
return self._readsGeneratorMultiple(request)
def readsGenerator(self, request):
"""
Returns a generator over the (read, nextPageToken) pairs defined
by the specified request
"""
if request.referenceId is None:
raise exceptions.UnmappedReadsNotSupported()
if len(request.readGroupIds) != 1:
raise exceptions.NotImplementedException(
"Exactly one read group id must be specified")
compoundId = datamodel.ReadGroupCompoundId.parse(
request.readGroupIds[0])
dataset = self.getDataset(compoundId.datasetId)
intervalIterator = ReadsIntervalIterator(request,
dataset.getReadGroupIdMap())
return intervalIterator