class Project(db.Model):
id = db.Column(db.Integer, primary_key=True, autoincrement=True)
name = db.Column(db.String(50))
location = db.Column(db.String(50))
status = db.Column(db.Enum(ProjectStatus)) # enum list
analysis = db.relationship('Analysis', backref='owner_project')
probes = db.relationship('UploadedMediaFile', backref='owner_project')
references = db.relationship('UploadedMediaFile',
backref='owner_project_of_references')
additionalData = db.relationship('UploadedDataFile',
backref='owner_project')
results = db.relationship('ResultSummary', backref='owner_project')
elaborations = db.relationship('Elaboration',
backref='owner_project_of_elaboration')
def __init__(self, name):
self.name = name
self.status = ProjectStatus.DRAFT
self.analysis = []
self.probes = []
self.references = []
self.additionalData = []
self.results = []
self.elaborations = []
def __repr__(self):
return '<Project %r>' % self.name
class UploadedDataFile(db.Model):
id = db.Column(db.Integer, primary_key=True, autoincrement=True)
fileName = db.Column(db.String(50))
hash = db.Column(db.String())
location = db.Column(db.String(50))
dataType = db.Column(db.String())
project_id = db.Column(db.Integer, db.ForeignKey('project.id'))
def __init__(self, fileName):
self.fileName = fileName
def __repr__(self):
return '<UploadedDataFile %r>' % self.fileName
class Analysis(db.Model):
id = db.Column(db.Integer, primary_key=True)
uuid = db.Column(db.String())
result_uuid = db.Column(db.String())
status = db.Column(db.String())
tools = db.Column(db.Integer())
completed_tools = db.Column(db.Integer())
elaboration_uuid = db.Column(db.Integer())
project_id = db.Column(db.Integer, db.ForeignKey('project.id'))
def __init__(self):
self.status = 'RUNNING'
self.tools = 0
self.completed_tools = 0
def __repr__(self):
return '<Analysis %r>' % self.name
class ResultDetails(db.Model):
id = db.Column(db.Integer, primary_key=True, autoincrement=True)
location = db.Column(db.String())
probes = db.Column(db.PickleType())
toolId = db.Column(db.Integer())
name = db.Column(db.String())
resultType = db.Column(db.Enum(ResultType))
project_id = db.Column(db.Integer, db.ForeignKey('project.id'))
dataType = db.Column(db.String, db.ForeignKey('project.id'))
data = db.Column(db.PickleType())
def __init__(self, name):
self.name = name
self.probes = []
def __repr__(self):
return '<ResultSummary %r>' % self.name
class Result(db.Model):
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String(50))
analysis_id = db.Column(db.Integer, db.ForeignKey('analysis.id'))
def __init__(self, name):
self.name = name
def __repr__(self):
return '<Result %r>' % self.name
class Tool(db.Model):
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String(50))
description = db.Column(db.String())
endpoint = db.Column(db.String())
method = db.Column(db.String())
# supportedDataTypes = db.ARRAY(db.String())
# supportedDataFormats = db.ARRAY(db.String())
# references = db.ARRAY(db.String())
supportedDataTypes = db.Column(db.PickleType())
supportedDataFormats = db.Column(db.PickleType())
references = db.Column(db.PickleType())
def __init__(self, name, description):
self.name = name
self.description = description
self.supportedDataTypes = []
self.supportedDataFormats = []
self.references = []
def __repr__(self):
return '<Tool %r>' % self.name
class Elaboration(db.Model):
id = db.Column(db.Integer, primary_key=True, autoincrement=True)
number_of_tools = db.Column(db.Integer())
project_id = db.Column(db.Integer, db.ForeignKey('project.id'))
completed_tool_elaborations = db.Column(db.Integer)
analysis_uuid_list = db.Column(db.PickleType())
status = db.Column(db.String())
uuid = db.Column(db.String)
def __init__(self):
self.completed_tool_elaborations = 0
self.analysis_uuid_list = []
self.status = 'RUNNING'
def __repr__(self):
return '<Elaboration %r>' % self.number_of_tools
class User(db.Model):
id = db.Column(db.Integer, primary_key=True)
email = db.Column(db.String(64), unique=True, index=True)
public_id = db.Column(db.String(100), unique=True)
username = db.Column(db.String(64))
user_role = db.Column(db.String(length=30), default='user')
password_hash = db.Column(db.String(128))
name = db.Column(db.String(64))
location = db.Column(db.String(64))
member_since = db.Column(db.DateTime(), default=datetime.now)
last_seen = db.Column(db.DateTime(), default=datetime.now)
is_active = db.Column(db.Boolean, default=False)
avatar_hash = db.Column(db.String(32))
def __init__(self, **kwargs):
super(User, self).__init__(**kwargs)
if self.email is not None and self.avatar_hash is None:
self.avatar_hash = hashlib.md5(
self.email.encode('utf-8')).hexdigest()
def __repr__(self):
return '<User %r>' % self.username
# crea un hash per la password (per non averla in chiaro)
def hash_password(self, password):
self.password_hash = pwd_context.encrypt(password)
# controlla la password
def verify_password(self, password):
return pwd_context.verify(password, self.password_hash)
# genera un token token.
def generate_auth_token(self, permission_level):
# controlla se è admin.
if permission_level == 1:
# Generate un token per admin con flag 1.
token = jwt.dumps({
'email': self.email,
'admin': 1
}).decode('ascii')
# ritorna un admin flag.
return token
elif permission_level == 2:
# genera un admin token con flag 2.
token = jwt.dumps({
'email': self.email,
'admin': 2
}).decode('ascii')
# ritorna un admin flag.
return token
# ritorna un normale user flag permission_level == 0
token = jwt.dumps({'email': self.email, 'admin': 0}).decode('ascii')
# jwt.make_header(header_fields=token)
return token
# genera un nuovo token di accesso da quello di refresh
@staticmethod
@auth.verify_token
def verify_auth_token(token):
# crea un global none user.
g.user = None
try:
# carica token.
data = jwt.loads(token)
except Exception as why:
logging.error(why)
# se c'è un errore ritorna false
return False
# controlla se la mail e il permesso di admin sono nel hjwt
if 'email' and 'admin' in data:
# setta email dal jwt.
g.user = data['email']
# Set l'admin permission dal jwt.
g.admin = data['admin']
# ritorna true.
return True
# altrimenti se non verificato ritorna false.
return False
# genera un confirmation token.
def generate_confirmation_token(self, email, username):
return confirm_email_jwt.dumps({
'email': self.email,
'username': self.username
}).decode('ascii')
# controlla token
@staticmethod
def verify_confirm_token(confirm_token, confirm_email):
try:
data = confirm_email_jwt.loads(confirm_token)
print(('s', confirm_email))
# se il token è scaduto,ritorna None
if confirm_email == data['email']:
user = User.query.filter_by(email=data['email']).first()
# set is_activce a 1
user.is_active = 1
# print(user)
db.session.add(user)
db.session.commit()
return True
except Exception as why:
logging.info(
"User email confirmation failed, token may have expired " +
str(why))
print("token exp.....")
return None
else:
return False
# ottiene reset token
def generate_reset_token(self):
return jwt.dumps({'reset': self.id}).decode('ascii')