def main(path, config, options):
h5 = options.h5
odor = options.odor
try:
generate_empty_data_directory.main(path, config)
except:
'Could not make empty data directory -- probably exists already!'
return
h5_path = os.path.join(path, config.h5_path)
shutil.move(h5, h5_path)
if odor is not None:
odor_path = os.path.join(path, config.odor_control_path)
shutil.move(odor, odor_path)
if config.h5_files is not None:
save_h5_to_dataset.main(path, config)
prep_dataset.main(path, config)
make_plots.main(path, config)
def main(path, config, options):
h5 = options.h5
# make file structure
try:
generate_empty_data_directory.main(path, config)
except:
'Could not make empty data directory -- probably exists already!'
return
# move h5 file
h5_path = os.path.join(path, config.h5_path)
shutil.move(h5, h5_path)
# save_h5_to_dataset.py: do raw dataset analysis
if config.h5_files is not None:
save_h5_to_dataset.main(path, config)
# prep_dataset.py: load raw dataset, cull data, apply other functions
prep_dataset.main(path, config)
# make_plots.py: make all the plots you want
make_plots.main(path, config)