def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input: ', gpr.fil)
x0, y0, vlos = np.genfromtxt(gpr.fil,
skiprows=0,
unpack=True,
usecols=(0, 1, 5))
# use only 3000 random particles:
ind = np.arange(len(x0))
np.random.shuffle(ind)
ind = ind[:3000]
x0 = x0[ind]
y0 = y0[ind]
vlos = vlos[ind]
x0 *= 1000. # [pc]
y0 *= 1000. # [pc]
# shrinking sphere method
pm = np.ones(len(x0))
com_x, com_y, com_vz = gc.com_shrinkcircle_v_2D(x0, y0, vlos, pm)
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vlos -= com_vz #[km/s]
import gi_file as gf
for pop in range(2):
Rc = np.sqrt(x0**2 + y0**2) # [pc]
Rhalf = np.median(Rc) # [pc]
Rscale = Rhalf # or gpr.r_DM # [pc]
gp.Xscale.append(Rscale) # [pc]
print('Rscale = ', Rscale, ' pc')
print('max(R) = ', max(Rc), ' pc')
print('total number of stars: ', len(Rc))
R0 = np.sqrt(x0**2 + y0**2) / Rscale
sel = (R0 < gp.maxR)
x = x0[sel] / Rscale
y = y0[sel] / Rscale # [Rscale]
vz = vlos[sel] # [km/s]
m = np.ones(len(x))
R = np.sqrt(x * x + y * y) * Rscale # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), np.median(R))
c = open(gp.files.get_com_file(pop), 'w')
print('# x [Xscale],','y [Xscale],','vLOS [km/s],','Xscale = ', \
Rscale, ' pc', file=c)
for k in range(len(x)):
print(x[k], y[k], vz[k], file=c) #[rscale], [rscale], [km/s]
c.close()
if gpr.showplots:
gpr.show_part_pos(x, y, np.ones(len(x)), Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input: ', gpr.fil)
M0,x0,y0,z0,vx0, vy0, vz0, comp0 = read_data(gpr.fil)
# [Msun], 3*[pc], 3*[km/s], [1]
# assign population
if gp.pops==2:
pm1 = (comp0 == 1) # will be overwritten below if gp.metalpop
pm2 = (comp0 == 2) # same same
elif gp.pops==1:
pm1 = (comp0 < 3)
pm2 = (comp0 == -1) # assign none, but of same length as comp0
# cut to subsets
ind1 = gh.draw_random_subset(x1, gp.ntracer[1-1])
M1, x1, y1, z1, vx1, vy1, vz1, comp1 = select_pm(M1, x1, y1, z1, vx1, vy1, vz1, comp1, ind1)
ind2 = gh.draw_random_subset(x2, gp.ntracer[2-1])
M2, x2, y2, z2, vx2, vy2, vz2, comp2 = select_pm(M2, x2, y2, z2, vx2, vy2, vz2, comp2, ind2)
# use vz for no contamination, or vb for with contamination
M0, x0, y0, z0, vx0, vy0, vz0 = concat_pops(M1, M2, x1, x2, y1, y2, z1, z2, vx1, vx2, vy1, vy2, vz1, vz2, gp)
com_x, com_y, com_z, com_vz = com_shrinkcircle_v(x0, y0, z0, vz0, pm0) # [pc]
print('COM [pc]: ', com_x, com_y, com_z) # [pc]
print('VOM [km/s]', com_vz) # [km/s]
# from now on, work with 2D data only; z0 was only used to get
# center in (x,y) better
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vz0 -= com_vz # [km/s]
R0 = np.sqrt(x0**2+y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] from all tracer points
pop = -1
for pmn in [pm, pm1, pm2]:
pop = pop + 1 # population number
pmr = ( R0 < (gp.maxR*Rscale) ) # read max extension for data
#(rprior*Rscale) from
#gi_params
pmn = pmn*pmr # [1]
print("fraction of members = ", 1.0*sum(pmn)/len(pmn))
x, y, z, comp, vz, vb, Mg, PMN = select_pm(x0, y0, z0, comp0, vz0, vb0, Mg0, PM0, pmn)
R = np.sqrt(x*x+y*y) # [pc]
Rscalei = np.median(R)
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei)
gf.write_data_output(gp.files.get_com_file(pop), x/Rscalei, y/Rscalei, vz, Rscalei)
if gpr.showplots:
gpr.show_part_pos(x, y, pmn, Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input: ', gpr.fil)
x0,y0,vlos = np.genfromtxt(gpr.fil, skiprows=0, unpack = True,
usecols = (0,1,5))
# use only 3000 random particles:
ind = np.arange(len(x0))
np.random.shuffle(ind)
ind = ind[:3000]
x0 = x0[ind]; y0 = y0[ind]; vlos = vlos[ind]
x0 *= 1000. # [pc]
y0 *= 1000. # [pc]
# shrinking sphere method
pm = np.ones(len(x0))
com_x, com_y, com_vz = gc.com_shrinkcircle_v_2D(x0, y0, vlos, pm)
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vlos -= com_vz #[km/s]
import gi_file as gf
for pop in range(2):
Rc = np.sqrt(x0**2+y0**2) # [pc]
Rhalf = np.median(Rc) # [pc]
Rscale = Rhalf # or gpr.r_DM # [pc]
gp.Xscale.append(Rscale) # [pc]
print('Rscale = ', Rscale,' pc')
print('max(R) = ', max(Rc),' pc')
print('total number of stars: ', len(Rc))
R0 = np.sqrt(x0**2+y0**2)/Rscale
sel = (R0 < gp.maxR)
x = x0[sel]/Rscale; y = y0[sel]/Rscale # [Rscale]
vz = vlos[sel] # [km/s]
m = np.ones(len(x))
R = np.sqrt(x*x+y*y)*Rscale # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), np.median(R))
c = open(gp.files.get_com_file(pop), 'w')
print('# x [Xscale],','y [Xscale],','vLOS [km/s],','Xscale = ', \
Rscale, ' pc', file=c)
for k in range(len(x)):
print(x[k], y[k], vz[k], file=c) #[rscale], [rscale], [km/s]
c.close()
if gpr.showplots:
gpr.show_part_pos(x, y, np.ones(len(x)), Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
gpr.fil = gpr.dir + "/deBoer/table1.dat"
ALL = np.loadtxt(gpr.fil)
RAh = ALL[:, 0]
RAm = ALL[:, 1]
RAs = ALL[:, 2]
DEd = ALL[:, 3]
DEm = ALL[:, 4]
DEs = ALL[:, 5]
# that's all we read in for now. Crude assumptions: each star belongs to Fornax, and has mass 1Msun
# only use stars which are members of the dwarf
sig = abs(RAh[0]) / RAh[0]
RAh = RAh / sig
xs = 15 * (RAh * 3600 + RAm * 60 + RAs) * sig # [arcsec/15]
sig = abs(DEd[0]) / DEd[0]
DEd = DEd / sig
ys = (DEd * 3600 + DEm * 60 + DEs) * sig # [arcsec]
arcsec = 2. * np.pi / (360. * 60. * 60) # [pc]
kpc = 1000 # [pc]
DL = {
1: lambda x: x * (138), #+/- 8 for Fornax
2: lambda x: x * (101), #+/- 5 for Carina
3: lambda x: x * (79), #+/- 4 for Sculptor
4: lambda x: x * (86), #+/- 4 for Sextans
5: lambda x: x * (80) #+/- 10 for Draco
}[gp.case](kpc)
xs *= (arcsec * DL) # [pc]
ys *= (arcsec * DL) # [pc]
x0 = np.copy(xs)
y0 = np.copy(ys) # [pc]
com_x, com_y = com_shrinkcircle_2D(x0, y0) # [pc], [km/s]
# from now on, work with 2D data only; z0 was only used to get center in (x,y) better
# x0 -= com_x; y0 -= com_y # [pc]
# vz0 -= com_vz #[km/s]
R0 = np.sqrt(x0**2 + y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] overall
pop = 0
pmr = (R0 < (gp.maxR * Rscale)
) # read max extension for data (rprior*Rscale) from gi_params
x = 1. * x0[pmr]
y = 1. * y0[pmr]
R = np.sqrt(x * x + y * y) # [pc]
Rscalei = np.median(R) # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei) # [pc]
gf.write_data_output(gp.files.get_com_file(pop), x / Rscalei, y / Rscalei,
np.zeros(len(x)), Rscalei) # [pc]
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
gpr.fil = gpr.dir+"/deBoer/table1.dat"
ALL = np.loadtxt(gpr.fil)
RAh = ALL[:,0]
RAm = ALL[:,1]
RAs = ALL[:,2]
DEd = ALL[:,3]
DEm = ALL[:,4]
DEs = ALL[:,5]
# that's all we read in for now. Crude assumptions: each star belongs to Fornax, and has mass 1Msun
# only use stars which are members of the dwarf
sig = abs(RAh[0])/RAh[0]
RAh = RAh/sig
xs = 15*(RAh*3600+RAm*60+RAs)*sig # [arcsec/15]
sig = abs(DEd[0])/DEd[0]
DEd = DEd/sig
ys = (DEd*3600+DEm*60+DEs)*sig # [arcsec]
arcsec = 2.*np.pi/(360.*60.*60) # [pc]
kpc = 1000 # [pc]
DL = {1: lambda x: x * (138),#+/- 8 for Fornax
2: lambda x: x * (101),#+/- 5 for Carina
3: lambda x: x * (79), #+/- 4 for Sculptor
4: lambda x: x * (86), #+/- 4 for Sextans
5: lambda x: x * (80) #+/- 10 for Draco
}[gp.case](kpc)
xs *= (arcsec*DL) # [pc]
ys *= (arcsec*DL) # [pc]
x0 = np.copy(xs)
y0 = np.copy(ys) # [pc]
com_x, com_y = com_shrinkcircle_2D(x0, y0) # [pc], [km/s]
# from now on, work with 2D data only; z0 was only used to get center in (x,y) better
# x0 -= com_x; y0 -= com_y # [pc]
# vz0 -= com_vz #[km/s]
R0 = np.sqrt(x0**2+y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] overall
pop = 0
pmr = (R0<(gp.maxR*Rscale)) # read max extension for data (rprior*Rscale) from gi_params
x=1.*x0[pmr]
y=1.*y0[pmr]
R = np.sqrt(x*x+y*y) # [pc]
Rscalei = np.median(R) # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei) # [pc]
gf.write_data_output(gp.files.get_com_file(pop), x/Rscalei, y/Rscalei, np.zeros(len(x)), Rscalei) # [pc]
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input:', gpr.fil)
x0, y0, z0, vx, vy, vz = np.transpose(np.loadtxt(gpr.fil))
# for purely tangential beta=-0.5 models, have units of kpc instead of pc
if gp.case == 9 or gp.case == 10:
x0 *= 1000. # [pc]
y0 *= 1000. # [pc]
z0 *= 1000. # [pc]
# cutting pm_i to a maximum of ntracers particles:
import gi_helper as gh
ind1 = gh.draw_random_subset(x0, gp.ntracer[1 - 1])
x0, y0, z0, vz0 = select_pm(x0, y0, z0, vz, ind1)
PM = np.ones(
len(x0)) # assign all particles the full probability of membership
import gi_centering as glc
com_x, com_y, com_z, com_vz = glc.com_shrinkcircle_v(x0, y0, z0, vz, PM)
# from now on, work with 2D data only;
# z0 was only used to get center in (x,y) better
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vz -= com_vz # [km/s]
R0 = np.sqrt(x0 * x0 + y0 * y0) # [pc]
Rscale = np.median(R0) # [pc]
import gi_file as gf
for pop in range(gp.pops + 1): # gp.pops +1 for all components together
pmr = (R0 < (gp.maxR * Rscale))
#m = np.ones(len(R0))
x = x0[pmr] # [pc]
y = y0[pmr] # [pc]
R = np.sqrt(x * x + y * y) # [pc]
Rscalei = np.median(R)
# print("x y z" on first line, to interprete data later on)
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei)
gf.write_data_output(gp.files.get_com_file(pop), x / Rscalei,
y / Rscalei, vz, Rscalei)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input:', gpr.fil)
x0, y0, z0, vx, vy, vz = np.transpose(np.loadtxt(gpr.fil))
# for purely tangential beta=-0.5 models, have units of kpc instead of pc
if gp.case == 9 or gp.case == 10:
x0 *= 1000. # [pc]
y0 *= 1000. # [pc]
z0 *= 1000. # [pc]
# cutting pm_i to a maximum of ntracers particles:
import gi_helper as gh
ind1 = gh.draw_random_subset(x0, gp.ntracer[1-1])
x0, y0, z0, vz0 = select_pm(x0, y0, z0, vz, ind1)
PM = np.ones(len(x0)) # assign all particles the full probability of membership
import gi_centering as glc
com_x, com_y, com_z, com_vz = glc.com_shrinkcircle_v(x0, y0, z0, vz, PM)
# from now on, work with 2D data only;
# z0 was only used to get center in (x,y) better
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vz -= com_vz # [km/s]
R0 = np.sqrt(x0*x0+y0*y0) # [pc]
Rscale = np.median(R0) # [pc]
import gi_file as gf
for pop in range(gp.pops+1): # gp.pops +1 for all components together
pmr = (R0<(gp.maxR*Rscale))
#m = np.ones(len(R0))
x = x0[pmr] # [pc]
y = y0[pmr] # [pc]
R = np.sqrt(x*x+y*y) # [pc]
Rscalei = np.median(R)
# print("x y z" on first line, to interprete data later on)
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei)
gf.write_data_output(gp.files.get_com_file(pop), x/Rscalei, y/Rscalei, vz, Rscalei)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
gpr.fil = gpr.dir+"/data/tracers.dat"
A = np.loadtxt(gpr.fil, skiprows=25)
RAh,RAm,RAs,DEd,DEm,DEs,Vlos,e_Vlos,Teff,e_Teff,logg,e_logg,Fe,e_Fe,Nobs = A.T
# only use stars which have Mg measurements
pm = (Nobs>0) # (PM>=0.95)*
print("f_members = ", gh.pretty(1.*sum(pm)/len(pm)))
RAh=RAh[pm]
RAm=RAm[pm]
RAs=RAs[pm]
DEd=DEd[pm]
DEm=DEm[pm]
DEs=DEs[pm]
Vlos=Vlos[pm]
e_Vlos=e_Vlos[pm]
Teff=Teff[pm]
e_Teff=e_Teff[pm]
logg=logg[pm]
e_logg=e_logg[pm]
Fe=Fe[pm]
e_Fe=e_Fe[pm]
Nobs = Nobs[pm]
sig = abs(RAh[0])/RAh[0]
#print('RAh: signum = ',gh.pretty(sig))
RAh = RAh/sig
xs = 15*(RAh*3600+RAm*60+RAs)*sig # [arcsec/15]
sig = abs(DEd[0])/DEd[0]
#print('DEd: signum = ', gh.pretty(sig))
DEd = DEd/sig
ys = (DEd*3600+DEm*60+DEs)*sig # [arcsec]
arcsec = 2.*np.pi/(360.*60.*60) # [pc]
kpc = 1000 # [pc]
DL = {1: lambda x: x * (138),#+/- 8 for Fornax
2: lambda x: x * (101),#+/- 5 for Carina
3: lambda x: x * (79), #+/- 4 for Sculptor
4: lambda x: x * (86), #+/- 4 for Sextans
5: lambda x: x * (80) #+/- 10 for Draco
}[gp.case](kpc)
xs *= (arcsec*DL) # [pc]
ys *= (arcsec*DL) # [pc]
x0 = np.copy(xs)
y0 = np.copy(ys) # [pc]
vz0 = np.copy(Vlos) # [km/s]
Fe0 = np.copy(Fe)
# only use stars which are members of the dwarf: exclude pop3 by construction
#pm = (PM0 >= gpr.pmsplit) # exclude foreground contamination, outliers
#x0, y0, vz0, Mg0, PM0 = select_pm(x0, y0, vz0, Mg0, PM0, pm)
# assign population
if gp.pops == 2:
# drawing of populations based on metallicity
# get parameters from function in pymcmetal.py
#[p, mu1, sig1, mu2, sig2] = np.loadtxt(gp.files.dir+'metalsplit.dat')
#[pm1, pm2] = np.loadtxt(gp.files.dir+'metalsplit_assignment.dat')
popass = np.loadtxt(gp.files.dir+'popass')
pm1 = (popass==1)
pm2 = (popass==2)
elif gp.pops == 1:
pm1 = (Teff >= 0)
pm2 = (Teff < 0) # assign none, but of same length as xs
x1, y1, vz1, Fe1, PM1 = select_pm(x0, y0, vz0, Fe, pm, pm1)
x2, y2, vz2, Fe2, PM2 = select_pm(x0, y0, vz0, Fe, pm, pm2)
# cutting pm_i to a maximum of ntracers_i particles each:
ind1 = np.arange(len(x1))
np.random.shuffle(ind1) # random.shuffle already changes ind
ind1 = ind1[:gp.ntracer[1-1]]
ind2 = np.arange(len(x2))
np.random.shuffle(ind2) # random.shuffle already changes ind
ind2 = ind2[:gp.ntracer[2-1]]
x1, y1, vz1, Fe1, PMS1 = select_pm(x1, y1, vz1, Fe1, PM1, ind1)
x2, y2, vz2, Fe2, PMS2 = select_pm(x2, y2, vz2, Fe2, PM2, ind2)
x0, y0, vz0, pm1, pm2, pm = concat_pops(x1, x2, y1, y2, vz1, vz2, gp)
# optimum: get 3D center of mass with means
# com_x, com_y, com_z = com_mean(x0,y0,z0,PM0) # 3*[pc], z component included if available
com_x, com_y, com_vz = com_shrinkcircle_v_2D(x0, y0, vz0, pm) # [pc], [km/s]
# from now on, work with 2D data only; z0 was only used to get center in (x,y) better
# x0 -= com_x; y0 -= com_y # [pc]
# vz0 -= com_vz #[km/s]
R0 = np.sqrt(x0**2+y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] overall
pop = -1
for pmn in [pm, pm1, pm2]:
pop = pop+1
pmr = (R0<(gp.maxR*Rscale)) # read max extension for data
# (rprior*Rscale) from gi_params
pmn = pmn*pmr # [1]
print("fraction of members = ", 1.0*sum(pmn)/len(pmn))
x, y, vz, Fe, PMN = select_pm(x0, y0, vz0, Fe0, pm, pmn)
R = np.sqrt(x*x+y*y) # [pc]
Rscalei = np.median(R) # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei) # [pc]
gf.write_data_output(gp.files.get_com_file(pop), x/Rscalei, y/Rscalei, vz, Rscalei) # [pc]
if gpr.showplots:
gpr.show_part_pos(x, y, pmn, Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
gpr.fil = gpr.dir + "/data/tracers.dat"
delim = [0, 22, 3, 3, 6, 4, 3, 5, 6, 6, 7, 5, 6, 5, 6, 5, 6]
ID = np.genfromtxt(gpr.fil,
skiprows=29,
unpack=True,
usecols=(0, 1),
delimiter=delim)
RAh, RAm, RAs, DEd, DEm, DEs, Vmag, VI, VHel, e_VHel, SigFe, e_SigFe, SigMg, e_SigMg, PM = np.genfromtxt(
gpr.fil,
skiprows=29,
unpack=True,
usecols=tuple(range(2, 17)),
delimiter=delim,
filling_values=-1)
# only use stars which have Mg measurements
pm = (SigMg > -1) * (PM >= 0.95)
print("f_members = ", gh.pretty(1. * sum(pm) / len(pm)))
ID = ID[1][pm]
RAh = RAh[pm]
RAm = RAm[pm]
RAs = RAs[pm]
DEd = DEd[pm]
DEm = DEm[pm]
DEs = DEs[pm]
Vmag = Vmag[pm]
VI = VI[pm]
VHel = VHel[pm]
e_VHel = e_VHel[pm]
SigFe = SigFe[pm]
e_SigFe = e_SigFe[pm]
SigMg = SigMg[pm]
e_SigMg = e_SigMg[pm]
PM = PM[pm]
Mg0 = SigMg
sig = abs(RAh[0]) / RAh[0]
RAh = RAh / sig
xs = 15 * (RAh * 3600 + RAm * 60 + RAs) * sig # [arcsec/15]
sig = abs(DEd[0]) / DEd[0]
DEd = DEd / sig
ys = (DEd * 3600 + DEm * 60 + DEs) * sig # [arcsec]
arcsec = 2. * np.pi / (360. * 60. * 60) # [pc]
kpc = 1000 # [pc]
DL = {
1: lambda x: x * (138), #+/- 8 for Fornax
2: lambda x: x * (101), #+/- 5 for Carina
3: lambda x: x * (79), #+/- 4 for Sculptor
4: lambda x: x * (86), #+/- 4 for Sextans
5: lambda x: x * (80) #+/- 10 for Draco
}[gp.case](kpc)
xs *= (arcsec * DL) # [pc]
ys *= (arcsec * DL) # [pc]
PM0 = np.copy(PM)
x0 = np.copy(xs)
y0 = np.copy(ys) # [pc]
vz0 = np.copy(VHel) # [km/s]
# only use stars which are members of the dwarf: exclude pop3 by construction
#pm = (PM0 >= gpr.pmsplit) # exclude foreground contamination, outliers
#x0, y0, vz0, Mg0, PM0 = select_pm(x0, y0, vz0, Mg0, PM0, pm)
# assign population
if gp.pops == 2:
# drawing of populations based on metallicity
# get parameters from function in pymcmetal.py
#[p, mu1, sig1, mu2, sig2] = np.loadtxt(gp.files.dir+'metalsplit.dat')
#[pm1, pm2] = np.loadtxt(gp.files.dir+'metalsplit_assignment.dat')
popass = np.loadtxt(gp.files.dir + 'popass')
pm1 = (popass == 1)
pm2 = (popass == 2)
elif gp.pops == 1:
pm1 = (PM >= 0)
pm2 = (PM < 0) # assign none, but of same length as xs
x1, y1, vz1, Mg1, PM1 = select_pm(x0, y0, vz0, Mg0, PM0, pm1)
x2, y2, vz2, Mg2, PM2 = select_pm(x0, y0, vz0, Mg0, PM0, pm2)
# cutting pm_i to a maximum of ntracers_i particles each:
ind1 = np.arange(len(x1))
np.random.shuffle(ind1) # random.shuffle already changes ind
ind1 = ind1[:gp.ntracer[1 - 1]]
ind2 = np.arange(len(x2))
np.random.shuffle(ind2) # random.shuffle already changes ind
ind2 = ind2[:gp.ntracer[2 - 1]]
x1, y1, vz1, Mg1, PMS1 = select_pm(x1, y1, vz1, Mg1, PM1, ind1)
x2, y2, vz2, Mg2, PMS2 = select_pm(x2, y2, vz2, Mg2, PM2, ind2)
x0, y0, vz0, pm1, pm2, pm = concat_pops(x1, x2, y1, y2, vz1, vz2, gp)
# optimum: get 3D center of mass with means
# com_x, com_y, com_z = com_mean(x0,y0,z0,PM0) # 3*[pc], z component included if available
com_x, com_y, com_vz = com_shrinkcircle_v_2D(x0, y0, vz0,
pm) # [pc], [km/s]
# from now on, work with 2D data only; z0 was only used to get center in (x,y) better
# x0 -= com_x; y0 -= com_y # [pc]
# vz0 -= com_vz #[km/s]
R0 = np.sqrt(x0**2 + y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] overall
pop = -1
for pmn in [pm, pm1, pm2]:
pop = pop + 1
pmr = (R0 < (gp.maxR * Rscale)) # read max extension for data
# (rprior*Rscale) from gi_params
pmn = pmn * pmr # [1]
print("fraction of members = ", 1.0 * sum(pmn) / len(pmn))
x, y, vz, Mg, PMN = select_pm(x0, y0, vz0, Mg0, PM0, pmn)
R = np.sqrt(x * x + y * y) # [pc]
Rscalei = np.median(R) # [pc]
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei) # [pc]
gf.write_data_output(gp.files.get_com_file(pop), x / Rscalei,
y / Rscalei, vz, Rscalei) # [pc]
if gpr.showplots:
gpr.show_part_pos(x, y, pmn, Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input: ', gpr.fil)
x0,y0,z0,vb0,vz0,Mg0,PM0,comp0 = read_data(gpr.fil)
# [pc], [km/s], [1]
# only use stars which are members of the dwarf: exclude pop3 by
# construction
pm = (PM0 >= gpr.pmsplit) # exclude foreground contamination,
#outliers
x0, y0, z0, comp0, vb0, vz0, Mg0, PM0 = select_pm(x0, y0, z0, comp0, vb0, vz0, Mg0, PM0, pm)
# assign population
if gp.pops==2:
pm1 = (comp0 == 1) # will be overwritten below if gp.metalpop
pm2 = (comp0 == 2) # same same
elif gp.pops==1:
pm1 = (comp0 < 3)
pm2 = (comp0 == -1) # assign none, but of same length as comp0
if gp.metalpop:
# drawing of populations based on metallicity get parameters
# from function in pymcmetal.py
import pickle
fi = open('metalsplit.dat', 'rb')
DATA = pickle.load(fi)
fi.close()
p, mu1, sig1, mu2, sig2, M, pm1, pm2 = DATA
x1, y1, z1, comp1, vb1, vz1, Mg1, PM1 = select_pm(x0, y0, z0, comp0, vb0, vz0, Mg0, PM0, pm1)
x2, y2, z2, comp2, vb2, vz2, Mg2, PM2 = select_pm(x0, y0, z0, comp0, vb0, vz0, Mg0, PM0, pm2)
# cut to subsets
ind1 = gh.draw_random_subset(x1, gp.ntracer[1-1])
x1, y1, z1, comp1, vb1, vz1, Mg1, PM1 = select_pm(x1, y1, z1, comp1, vb1, vz1, Mg1, PM1, ind1)
ind2 = gh.draw_random_subset(x2, gp.ntracer[2-1])
x2, y2, z2, comp2, vb2, vz2, Mg2, PM2 = select_pm(x2, y2, z2, comp2, vb2, vz2, Mg2, PM2, ind2)
# use vz for no contamination, or vb for with contamination
x0, y0, z0, vz0, pm1, pm2, pm = concat_pops(x1, x2, y1, y2, z1, z2, vz1, vz2, gp)
com_x, com_y, com_z, com_vz = com_shrinkcircle_v(x0, y0, z0, vz0, pm) # [pc]
print('COM [pc]: ', com_x, com_y, com_z) # [pc]
print('VOM [km/s]', com_vz) # [km/s]
# from now on, work with 2D data only; z0 was only used to get
# center in (x,y) better
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vz0 -= com_vz # [km/s]
R0 = np.sqrt(x0**2+y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] from all tracer points
pop = -1
for pmn in [pm, pm1, pm2]:
pop = pop + 1 # population number
pmr = ( R0 < (gp.maxR*Rscale) ) # read max extension for data
#(rprior*Rscale) from
#gi_params
pmn = pmn*pmr # [1]
print("fraction of members = ", 1.0*sum(pmn)/len(pmn))
x, y, z, comp, vz, vb, Mg, PMN = select_pm(x0, y0, z0, comp0, vz0, vb0, Mg0, PM0, pmn)
R = np.sqrt(x*x+y*y) # [pc]
Rscalei = np.median(R)
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei)
gf.write_data_output(gp.files.get_com_file(pop), x/Rscalei, y/Rscalei, vz, Rscalei)
if gpr.showplots:
gpr.show_part_pos(x, y, pmn, Rscale)
def run(gp):
import gr_params
gpr = gr_params.grParams(gp)
print('input: ', gpr.fil)
x0, y0, z0, vb0, vz0, Mg0, PM0, comp0 = read_data(gpr.fil)
# [pc], [km/s], [1]
# only use stars which are members of the dwarf: exclude pop3 by
# construction
pm = (PM0 >= gpr.pmsplit) # exclude foreground contamination,
#outliers
x0, y0, z0, comp0, vb0, vz0, Mg0, PM0 = select_pm(x0, y0, z0, comp0, vb0,
vz0, Mg0, PM0, pm)
# assign population
if gp.pops == 2:
pm1 = (comp0 == 1) # will be overwritten below if gp.metalpop
pm2 = (comp0 == 2) # same same
elif gp.pops == 1:
pm1 = (comp0 < 3)
pm2 = (comp0 == -1) # assign none, but of same length as comp0
if gp.metalpop:
# drawing of populations based on metallicity get parameters
# from function in pymcmetal.py
import pickle
fi = open('metalsplit.dat', 'rb')
DATA = pickle.load(fi)
fi.close()
p, mu1, sig1, mu2, sig2, M, pm1, pm2 = DATA
x1, y1, z1, comp1, vb1, vz1, Mg1, PM1 = select_pm(x0, y0, z0, comp0, vb0,
vz0, Mg0, PM0, pm1)
x2, y2, z2, comp2, vb2, vz2, Mg2, PM2 = select_pm(x0, y0, z0, comp0, vb0,
vz0, Mg0, PM0, pm2)
# cut to subsets
ind1 = gh.draw_random_subset(x1, gp.ntracer[1 - 1])
x1, y1, z1, comp1, vb1, vz1, Mg1, PM1 = select_pm(x1, y1, z1, comp1, vb1,
vz1, Mg1, PM1, ind1)
ind2 = gh.draw_random_subset(x2, gp.ntracer[2 - 1])
x2, y2, z2, comp2, vb2, vz2, Mg2, PM2 = select_pm(x2, y2, z2, comp2, vb2,
vz2, Mg2, PM2, ind2)
# use vz for no contamination, or vb for with contamination
x0, y0, z0, vz0, pm1, pm2, pm = concat_pops(x1, x2, y1, y2, z1, z2, vz1,
vz2, gp)
com_x, com_y, com_z, com_vz = com_shrinkcircle_v(x0, y0, z0, vz0,
pm) # [pc]
print('COM [pc]: ', com_x, com_y, com_z) # [pc]
print('VOM [km/s]', com_vz) # [km/s]
# from now on, work with 2D data only; z0 was only used to get
# center in (x,y) better
x0 -= com_x # [pc]
y0 -= com_y # [pc]
vz0 -= com_vz # [km/s]
R0 = np.sqrt(x0**2 + y0**2) # [pc]
Rhalf = np.median(R0) # [pc]
Rscale = Rhalf # [pc] from all tracer points
pop = -1
for pmn in [pm, pm1, pm2]:
pop = pop + 1 # population number
pmr = (R0 < (gp.maxR * Rscale)) # read max extension for data
#(rprior*Rscale) from
#gi_params
pmn = pmn * pmr # [1]
print("fraction of members = ", 1.0 * sum(pmn) / len(pmn))
x, y, z, comp, vz, vb, Mg, PMN = select_pm(x0, y0, z0, comp0, vz0, vb0,
Mg0, PM0, pmn)
R = np.sqrt(x * x + y * y) # [pc]
Rscalei = np.median(R)
gf.write_Xscale(gp.files.get_scale_file(pop), Rscalei)
gf.write_data_output(gp.files.get_com_file(pop), x / Rscalei,
y / Rscalei, vz, Rscalei)
if gpr.showplots:
gpr.show_part_pos(x, y, pmn, Rscale)