def setUp(self):
# arguments and keywords
self.points = [(0, 0), (1, 0), (0, 2)]
self.amorph = ROISelector.Amorph(self.points)
# # verbosity
self.v = {'verbose': 1}
print("")
print(self.separator)
print(self.shortDescription())
def test_add_point(self):
""" # ROISelector.Amorph.add_point """
# add point to grid points
print(">>> {}".format((5, 5)))
amorph = ROISelector.Amorph(np.flip(np.indices((3, 3)).T, 2))
amorph = amorph.add_point((5, 5), **self.v)
print(amorph.N)
self.assertIsInstance(amorph, ROISelector.Amorph)
# add point to flat points
print(">>> {}".format((5, 5)))
self.amorph.add_point((5, 5), **self.v)
self.assertIsInstance(self.amorph, ROISelector.Amorph)
def test_contains(self):
""" # ROISelector.Amorph.contains """
# in flat points
points = np.array([(5, 5), (0, 0), (1, 0)]).T
print(">>> {}".format(points))
self.amorph = self.amorph.add_point((5, 0), **self.v)
self.amorph.contains(*points, **self.v)
# in grid points
print(">>> {}".format(points))
amorph = ROISelector.Amorph(np.flip(np.indices((4, 4)).T, -1),
**self.v)
print(np.array([(5, 5), (3, 2), (0, 0), (1, 0)]).T)
amorph.contains(*np.array([(5, 5), (3, 2), (0, 0), (1, 0)]).T,
**self.v)
def test_Amorph(self):
""" # ROISelector.Amorph """
# with list
print(">>> {}".format(self.points))
amorph = ROISelector.Amorph(self.points, **self.v)
self.assertIsInstance(amorph, ROISelector.Amorph)
self.assertTrue(np.all(amorph == self.amorph))
# with tuple
print(">>> {}".format(tuple(self.points)))
amorph = ROISelector.Amorph(*self.points, **self.v)
self.assertIsInstance(amorph, ROISelector.Amorph)
self.assertTrue(np.all(amorph == self.amorph))
# with numpy array
print(">>> {}".format(np.flip(np.indices((3, 3)).T, 2)))
amorph = ROISelector.Amorph(np.flip(np.indices((3, 3)).T, 2), **self.v)
self.assertIsInstance(amorph, ROISelector.Amorph)
self.assertFalse(np.all(amorph == self.amorph))
self.assertIsInstance(amorph[:2, :2, :], ROISelector.Amorph)
# single-point input (separate)
print(">>> {}".format((0, 0)))
amorph = ROISelector.Amorph(0, 0, **self.v)
self.assertIsInstance(amorph, ROISelector.Amorph)
self.assertFalse(np.all(amorph == self.amorph))