def get_filmographic_number(number):
'''
This check is not sustainable, will have to be made more flexible!
'''
if len(number) == 7:
if number[:3] != 'af1':
number = ififuncs.get_reference_number()
return number.upper()
else:
number = ififuncs.get_reference_number()
return number.upper()
def get_reference_number(source):
'''
Checks if the reference number is in the folder path.
This check is not sustainable, will have to be made more flexible!
'''
basename = os.path.basename(os.path.dirname(source))
if len(basename) == 7:
if basename[:3] == 'af1':
return basename
else:
basename = ififuncs.get_reference_number()
return basename
def main(args_):
'''
Batch process packages by running accession.py and makepbcore.py
'''
args = parse_args(args_)
oe_list = []
if args.csv:
for line_item in ififuncs.extract_metadata(args.csv)[0]:
oe_number = line_item['Object Entry'].lower()
# this transforms OE-#### to oe####
transformed_oe = oe_number[:2] + oe_number[3:]
oe_list.append(transformed_oe)
if args.reference:
reference_number = get_filmographic_number(args.reference)
else:
reference_number = ififuncs.get_reference_number()
user = ififuncs.get_user()
accession_number = get_number(args)
accession_digits = int(accession_number[3:])
to_accession = initial_check(args, accession_digits, oe_list,
reference_number)
register = accession.make_register()
if args.csv:
desktop_logs_dir = ififuncs.make_desktop_logs_dir()
new_csv = os.path.join(desktop_logs_dir, os.path.basename(args.csv))
filmographic_dict, headers = ififuncs.extract_metadata(args.csv)
for oe_package in to_accession:
for filmographic_record in filmographic_dict:
if os.path.basename(oe_package).upper(
)[:2] + '-' + os.path.basename(
oe_package)[2:] == filmographic_record['Object Entry']:
filmographic_record['Reference Number'] = to_accession[
oe_package][1]
with open(new_csv, 'w') as csvfile:
fieldnames = headers
writer = csv.DictWriter(csvfile, fieldnames=fieldnames)
writer.writeheader()
for i in filmographic_dict:
writer.writerow(i)
if args.dryrun:
sys.exit()
proceed = ififuncs.ask_yes_no('Do you want to proceed?')
if proceed == 'Y':
for package in sorted(to_accession.keys()):
accession.main([
package, '-user', user, '-p', '-f', '-number',
to_accession[package][0], '-reference',
to_accession[package][1], '-register', register
])
collated_pbcore = gather_metadata(args.input)
print '\nA helper accessions register has been generated in order to help with registration - located here: %s' % register
print '\nA modified filmographic CSV has been generated with added reference numbers - located here: %s' % new_csv
print '\nA collated CSV consisting of each PBCore report has been generated for batch database import - located here: %s' % collated_pbcore
def main(args_):
'''
Launch all the functions for creating an IFI SIP.
'''
args = parse_args(args_)
start = datetime.datetime.now()
inputs = args.i
if args.d:
try:
import clairmeta
clairmeta_version = clairmeta.__version__
except ImportError:
print(
'Exiting as Clairmeta is not installed. If there is a case for not using clairmeta, please let me know and i can make a workaround'
)
sys.exit()
print(args)
user = ififuncs.determine_user(args)
object_entry = get_object_entry(args)
sip_path = make_folder_path(os.path.join(args.o), args, object_entry)
uuid, uuid_event = determine_uuid(args, sip_path)
new_log_textfile = os.path.join(sip_path,
'logs' + '/' + uuid + '_sip_log.log')
if args.d:
content_title = create_content_title_text(sip_path, args)
ififuncs.generate_log(new_log_textfile, 'EVENT = sipcreator.py started')
ififuncs.generate_log(
new_log_textfile, 'eventDetail=sipcreator.py %s' %
ififuncs.get_script_version('sipcreator.py'))
ififuncs.generate_log(new_log_textfile,
'Command line arguments: %s' % args)
ififuncs.generate_log(new_log_textfile, 'EVENT = agentName=%s' % user)
ififuncs.generate_log(new_log_textfile, uuid_event)
if not args.sc:
ififuncs.generate_log(
new_log_textfile, 'EVENT = eventType=Identifier assignement,'
' eventIdentifierType=object entry, value=%s' % object_entry)
metadata_dir = os.path.join(sip_path, 'metadata')
supplemental_dir = os.path.join(metadata_dir, 'supplemental')
logs_dir = os.path.join(sip_path, 'logs')
if args.accession:
accession_number = ififuncs.get_accession_number()
reference_number = ififuncs.get_reference_number()
parent = ififuncs.ask_question(
'What is the parent record? eg MV 1234. Enter n/a if this is a born digital acquisition with no parent.'
)
donor = ififuncs.ask_question(
'Who is the source of acquisition, as appears on the donor agreement? This will not affect Reproductions.'
)
depositor_reference = ififuncs.ask_question(
'What is the donor/depositor number? This will not affect Reproductions.'
)
acquisition_type = ififuncs.get_acquisition_type('')
donation_date = ififuncs.ask_question(
'When was the donation date in DD/MM/YYYY format? Eg. 31/12/1999 - Unfortunately this is NOT using ISO 8601.'
)
if args.zip:
inputxml, inputtracexml, dfxml = ififuncs.generate_mediainfo_xmls(
inputs[0], args.o, uuid, new_log_textfile)
if args.manifest:
shutil.copy(
args.manifest,
args.manifest.replace('_manifest.md5', '_manifest-md5.txt'))
source_manifest = args.manifest.replace('_manifest.md5',
'_manifest-md5.txt')
else:
source_manifest = os.path.join(
args.o,
os.path.basename(args.i[0]) + '_manifest-md5.txt')
ififuncs.generate_log(
new_log_textfile,
'EVENT = message digest calculation, status=started, eventType=messageDigestCalculation, agentName=hashlib, eventDetail=MD5 checksum of source files within ZIP'
)
ififuncs.hashlib_manifest(args.i[0], source_manifest,
os.path.dirname(args.i[0]))
ififuncs.generate_log(
new_log_textfile,
'EVENT = message digest calculation, status=finished, eventType=messageDigestCalculation, agentName=hashlib, eventDetail=MD5 checksum of source files within ZIP'
)
ififuncs.generate_log(
new_log_textfile,
'EVENT = packing, status=started, eventType=packing, agentName=makezip.py, eventDetail=Source object to be packed=%s'
% inputs[0])
makezip_judgement, zip_file = makezip.main([
'-i', inputs[0], '-o',
os.path.join(sip_path, 'objects'), '-basename', uuid + '.zip'
])
ififuncs.generate_log(
new_log_textfile,
'EVENT = packing, status=finished, eventType=packing, agentName=makezip.py, eventDetail=Source object packed into=%s'
% zip_file)
if makezip_judgement is None:
judgement = 'lossless'
else:
judgement = makezip_judgement
ififuncs.generate_log(
new_log_textfile,
'EVENT = losslessness verification, status=finished, eventType=messageDigestCalculation, agentName=makezip.py, eventDetail=embedded crc32 checksum validation, eventOutcome=%s'
% judgement)
ififuncs.generate_log(
new_log_textfile,
'EVENT = losslessness verification, status=finished, eventType=messageDigestCalculation, agentName=makezip.py, eventDetail=embedded crc32 checksum validation, eventOutcome=%s'
% judgement)
else:
log_names = move_files(inputs, sip_path, args, user)
ififuncs.get_technical_metadata(sip_path, new_log_textfile)
ififuncs.hashlib_manifest(metadata_dir,
metadata_dir + '/metadata_manifest.md5',
metadata_dir)
if args.sc:
normalise_objects_manifest(sip_path)
new_manifest_textfile = consolidate_manifests(sip_path, 'objects',
new_log_textfile)
if args.zip:
ififuncs.generate_log(
new_log_textfile,
'EVENT = Message Digest Calculation, status=started, eventType=message digest calculation, eventDetail=%s module=hashlib'
% zip_file)
ififuncs.manifest_update(new_manifest_textfile, zip_file)
ififuncs.generate_log(
new_log_textfile,
'EVENT = Message Digest Calculation, status=finished, eventType=message digest calculation, eventDetail=%s module=hashlib'
% zip_file)
consolidate_manifests(sip_path, 'metadata', new_log_textfile)
ififuncs.hashlib_append(logs_dir, new_manifest_textfile,
os.path.dirname(os.path.dirname(logs_dir)))
if args.supplement:
os.makedirs(supplemental_dir)
supplement_cmd = [
'-i', args.supplement, '-user', user, '-new_folder',
supplemental_dir,
os.path.dirname(sip_path), '-copy'
]
package_update.main(supplement_cmd)
if args.zip:
os.makedirs(supplemental_dir)
supplement_cmd = [
'-i', [inputxml, inputtracexml, dfxml, source_manifest], '-user',
user, '-new_folder', supplemental_dir,
os.path.dirname(sip_path), '-copy'
]
package_update.main(supplement_cmd)
if args.sc:
print('Generating Digital Forensics XML')
dfxml = accession.make_dfxml(args, sip_path, uuid)
ififuncs.generate_log(
new_log_textfile,
'EVENT = Metadata extraction - eventDetail=File system metadata extraction using Digital Forensics XML, eventOutcome=%s, agentName=makedfxml'
% (dfxml))
ififuncs.manifest_update(new_manifest_textfile, dfxml)
sha512_log = manifest.main([sip_path, '-sha512', '-s'])
sha512_manifest = os.path.join(os.path.dirname(sip_path),
uuid + '_manifest-sha512.txt')
ififuncs.merge_logs_append(sha512_log, new_log_textfile,
new_manifest_textfile)
ififuncs.checksum_replace(sha512_manifest, new_log_textfile, 'sha512')
os.remove(sha512_log)
ififuncs.sort_manifest(new_manifest_textfile)
if not args.quiet:
if 'log_names' in locals():
log_report(log_names)
finish = datetime.datetime.now()
print('\n- %s ran this script at %s and it finished at %s' %
(user, start, finish))
if args.d:
process_dcp(sip_path, content_title, args, new_manifest_textfile,
new_log_textfile, metadata_dir, clairmeta_version)
if args.accession:
register = accession.make_register()
filmographic_dict = ififuncs.extract_metadata(args.csv)[0]
for filmographic_record in filmographic_dict:
if filmographic_record['Reference Number'].lower(
) == reference_number.lower():
if filmographic_record['Title'] == '':
title = filmographic_record[
'TitleSeries'] + '; ' + filmographic_record['EpisodeNo']
else:
title = filmographic_record['Title']
oe_register = make_oe_register()
ififuncs.append_csv(
oe_register,
(object_entry.upper()[:2] + '-' + object_entry[2:], donation_date,
'1', '', title, donor, acquisition_type[1], accession_number,
'Representation of %s|Reproduction of %s' %
(reference_number, parent), ''))
accession_cmd = [
os.path.dirname(sip_path), '-user', user, '-f', '-number',
accession_number, '-reference', reference_number, '-register',
register, '-csv', args.csv, '-pbcore'
]
if not parent.lower() == 'n/a':
accession_cmd.extend(['-parent', parent])
accession_cmd.extend(['-donor', donor])
accession_cmd.extend(['-depositor_reference', depositor_reference])
accession_cmd.extend(['-acquisition_type', acquisition_type[2]])
accession_cmd.extend(['-donation_date', donation_date])
print(accession_cmd)
accession.main(accession_cmd)
return new_log_textfile, new_manifest_textfile
def main(args_):
'''
Launches the various functions that will accession a package
'''
args = parse_args(args_)
source = args.input
uuid_directory = ififuncs.check_for_sip([source])
if uuid_directory is not None:
oe_path = os.path.dirname(uuid_directory)
oe_number = os.path.basename(oe_path)
if args.user:
user = args.user
else:
user = ififuncs.get_user()
if args.number:
if args.number[:3] != 'aaa':
print 'First three characters must be \'aaa\' and last four characters must be four digits'
accession_number = ififuncs.get_accession_number()
elif len(args.number[3:]) != 4:
accession_number = ififuncs.get_accession_number()
print 'First three characters must be \'aaa\' and last four characters must be four digits'
elif not args.number[3:].isdigit():
accession_number = ififuncs.get_accession_number()
print 'First three characters must be \'aaa\' and last four characters must be four digits'
else:
accession_number = args.number
else:
accession_number = ififuncs.get_accession_number()
if args.pbcore:
if args.reference:
Reference_Number = args.reference.upper()
else:
Reference_Number = ififuncs.get_reference_number()
if args.acquisition_type:
acquisition_type = ififuncs.get_acquisition_type(
args.acquisition_type)
print acquisition_type
accession_path = os.path.join(os.path.dirname(oe_path),
accession_number)
uuid = os.path.basename(uuid_directory)
new_uuid_path = os.path.join(accession_path, uuid)
logs_dir = os.path.join(new_uuid_path, 'logs')
sipcreator_log = os.path.join(logs_dir, uuid) + '_sip_log.log'
if args.force:
proceed = 'Y'
else:
proceed = ififuncs.ask_yes_no('Do you want to rename %s with %s' %
(oe_number, accession_number))
if proceed == 'Y':
os.rename(oe_path, accession_path)
if args.register:
register = args.register
else:
register = make_register()
ififuncs.append_csv(register,
(oe_number.upper()[:2] + '-' + oe_number[2:],
accession_number, '', '', '', '', '', ''))
ififuncs.generate_log(sipcreator_log, 'EVENT = accession.py started')
ififuncs.generate_log(
sipcreator_log, 'eventDetail=accession.py %s' %
ififuncs.get_script_version('accession.py'))
ififuncs.generate_log(sipcreator_log,
'Command line arguments: %s' % args)
ififuncs.generate_log(sipcreator_log, 'EVENT = agentName=%s' % user)
ififuncs.generate_log(
sipcreator_log, 'EVENT = eventType=Identifier assignment,'
' eventIdentifierType=accession number, value=%s' %
accession_number)
ififuncs.generate_log(
sipcreator_log, 'EVENT = eventType=accession,'
' eventIdentifierType=accession number, value=%s' %
accession_number)
sip_manifest = os.path.join(accession_path, uuid) + '_manifest.md5'
sha512_log = manifest.main([new_uuid_path, '-sha512', '-s'])
sha512_manifest = os.path.join(os.path.dirname(new_uuid_path),
uuid + '_manifest-sha512.txt')
ififuncs.merge_logs_append(sha512_log, sipcreator_log, sip_manifest)
os.remove(sha512_log)
print('Generating Digital Forensics XML')
dfxml = make_dfxml(args, new_uuid_path, uuid)
ififuncs.generate_log(
sipcreator_log,
'EVENT = Metadata extraction - eventDetail=File system metadata extraction using Digital Forensics XML, eventOutcome=%s, agentName=makedfxml'
% (dfxml))
# this is inefficient. The script should not have to ask for reference
# number twice if someone wants to insert the filmographic but do not
# want to make the pbcore csv, perhaps because the latter already exists.
if args.csv:
metadata_dir = os.path.join(new_uuid_path, 'metadata')
package_filmographic = os.path.join(
metadata_dir, Reference_Number + '_filmographic.csv')
insert_filmographic(args.csv, Reference_Number,
package_filmographic)
ififuncs.generate_log(
sipcreator_log,
'EVENT = Metadata extraction - eventDetail=Filmographic descriptive metadata added to metadata folder, eventOutcome=%s, agentName=accession.py'
% (package_filmographic))
ififuncs.manifest_update(sip_manifest, package_filmographic)
ififuncs.sha512_update(sha512_manifest, package_filmographic)
print('Filmographic descriptive metadata added to metadata folder')
ififuncs.generate_log(sipcreator_log, 'EVENT = accession.py finished')
ififuncs.checksum_replace(sip_manifest, sipcreator_log, 'md5')
ififuncs.checksum_replace(sha512_manifest, sipcreator_log, 'sha512')
ififuncs.manifest_update(sip_manifest, dfxml)
ififuncs.sha512_update(sha512_manifest, dfxml)
if args.pbcore:
makepbcore_cmd = [
accession_path, '-p', '-user', user, '-reference',
Reference_Number
]
if args.parent:
makepbcore_cmd.extend(['-parent', args.parent])
if args.acquisition_type:
makepbcore_cmd.extend(
['-acquisition_type', args.acquisition_type])
if args.donor:
makepbcore_cmd.extend(['-donor', args.donor])
if args.donor:
makepbcore_cmd.extend(
['-depositor_reference', args.depositor_reference])
if args.donation_date:
makepbcore_cmd.extend(['-donation_date', args.donation_date])
makepbcore.main(makepbcore_cmd)
else:
print 'not a valid package. The input should include a package that has been through Object Entry'
def main(args_):
'''
Batch process packages by running accession.py and makepbcore.py
'''
args = parse_args(args_)
oe_list = []
if args.oe_csv:
if not args.filmographic:
print(' - batchaccession.py - ERROR\n - No -filmographic argument supplied. This is mandatory when using the -oe_csv option. \n - Exiting..')
sys.exit()
oe_csv_extraction = ififuncs.extract_metadata(args.oe_csv)
initial_oe_list = oe_csv_extraction[0]
oe_dicts = process_oe_csv(oe_csv_extraction, args.input)
# temp hack while we're performing both workflows
helper_csv = args.oe_csv
elif args.filmographic:
initial_oe_list = ififuncs.extract_metadata(args.filmographic)[0]
# temp hack while we're performing both workflows
helper_csv = args.filmographic
if args.oe_csv or args.filmographic:
for line_item in ififuncs.extract_metadata(helper_csv)[0]:
try:
oe_number = line_item['Object Entry'].lower()
except KeyError:
oe_number = line_item['OE No.'].lower()
# this transforms OE-#### to oe####
transformed_oe = oe_number[:2] + oe_number[3:]
oe_list.append(transformed_oe)
if not args.oe_csv:
# No need to ask for the reference number if the OE csv option is supplied.
# The assumption here is that the OE csv contains the reference numbers though.
if args.reference:
reference_number = get_filmographic_number(args.reference)
else:
reference_number = ififuncs.get_reference_number()
donor = ififuncs.ask_question('Who is the source of acquisition, as appears on the donor agreement? This will not affect Reproductions.')
depositor_reference = ififuncs.ask_question('What is the donor/depositor number? This will not affect Reproductions.')
acquisition_type = ififuncs.get_acquisition_type('')
user = ififuncs.get_user()
accession_number = get_number(args)
accession_digits = int(accession_number[3:])
if not args.oe_csv:
to_accession = initial_check(args, accession_digits, oe_list, reference_number)
else:
to_accession = {}
for oe_record in oe_dicts:
if os.path.isdir(oe_record['source_path']):
to_accession[oe_record['source_path']] = ['aaa' + str(accession_digits).zfill(4), oe_record['reference number'], oe_record['parent'], oe_record['donation_date']]
accession_digits += 1
for success in sorted(to_accession.keys()):
print('%s will be accessioned as %s' % (success, to_accession[success]))
register = accession.make_register()
if args.filmographic:
desktop_logs_dir = ififuncs.make_desktop_logs_dir()
if args.dryrun:
new_csv_filename = time.strftime("%Y-%m-%dT%H_%M_%S_DRYRUN_SHEET_PLEASE_DO_NOT_INGEST_JUST_IGNORE_COMPLETELY") + os.path.basename(args.filmographic)
else:
new_csv_filename = time.strftime("%Y-%m-%dT%H_%M_%S_") + os.path.basename(args.filmographic)
new_csv = os.path.join(desktop_logs_dir, new_csv_filename)
if not args.oe_csv:
filmographic_dict, headers = ififuncs.extract_metadata(args.filmographic)
for oe_package in to_accession:
for filmographic_record in filmographic_dict:
if os.path.basename(oe_package).upper()[:2] + '-' + os.path.basename(oe_package)[2:] == filmographic_record['Object Entry']:
filmographic_record['Reference Number'] = to_accession[oe_package][1]
get_filmographic_titles(to_accession, filmographic_dict)
with open(new_csv, 'w') as csvfile:
fieldnames = headers
# Removes Object Entry from headings as it's not needed in database.
del fieldnames[1]
writer = csv.DictWriter(csvfile, fieldnames=fieldnames)
writer.writeheader()
for i in filmographic_dict:
i.pop('Object Entry', None)
# Only include records that have reference numbers
if not i['Reference Number'] == '':
writer.writerow(i)
if args.dryrun:
sys.exit()
proceed = ififuncs.ask_yes_no(
'Do you want to proceed?'
)
if args.oe_csv:
new_csv = args.filmographic
if proceed == 'Y':
for package in sorted(to_accession.keys(), key=natural_keys):
accession_cmd = [
package, '-user', user,
'-f',
'-number', to_accession[package][0],
'-reference', to_accession[package][1],
'-register', register,
'-csv', new_csv
]
for oe_record in oe_dicts:
if oe_record['source_path'] == package:
if not oe_record['format'].lower() == 'dcdm':
accession_cmd.append('-pbcore')
if len(to_accession[package]) == 4:
if not to_accession[package][2] == 'n/a':
accession_cmd.extend(['-acquisition_type', '13'])
if args.oe_csv:
accession_cmd.extend(['-parent', to_accession[package][2]])
else:
accession_cmd.extend(['-parent', order.main(package)])
else:
accession_cmd.extend(['-donor', donor])
accession_cmd.extend(['-depositor_reference', depositor_reference])
accession_cmd.extend(['-acquisition_type', acquisition_type[2]])
print to_accession[package][3]
accession_cmd.extend(['-donation_date', to_accession[package][3]])
print accession_cmd
accession.main(accession_cmd)
collated_pbcore = gather_metadata(args.input)
sorted_filepath = ififuncs.sort_csv(register, 'accession number')
print '\nA helper accessions register has been generated in order to help with registration - located here: %s' % sorted_filepath
print '\nA modified filmographic CSV has been generated with added reference numbers - located here: %s' % new_csv
print '\nA collated CSV consisting of each PBCore report has been generated for batch database import - located here: %s' % collated_pbcore
def main(args_):
'''
Batch process packages by running accession.py and makepbcore.py
'''
args = parse_args(args_)
oe_list = []
if args.csv:
for line_item in ififuncs.extract_metadata(args.csv)[0]:
oe_number = line_item['Object Entry'].lower()
# this transforms OE-#### to oe####
transformed_oe = oe_number[:2] + oe_number[3:]
oe_list.append(transformed_oe)
if args.reference:
reference_number = get_filmographic_number(args.reference)
else:
reference_number = ififuncs.get_reference_number()
donor = ififuncs.ask_question(
'Who is the source of acquisition, as appears on the donor agreement? This will not affect Reproductions.'
)
depositor_reference = ififuncs.ask_question(
'What is the donor/depositor number? This will not affect Reproductions.'
)
acquisition_type = ififuncs.get_acquisition_type('')
user = ififuncs.get_user()
accession_number = get_number(args)
accession_digits = int(accession_number[3:])
to_accession = initial_check(args, accession_digits, oe_list,
reference_number)
register = accession.make_register()
if args.csv:
desktop_logs_dir = ififuncs.make_desktop_logs_dir()
if args.dryrun:
new_csv_filename = time.strftime(
"%Y-%m-%dT%H_%M_%S_DRYRUN_SHEET_PLEASE_DO_NOT_INGEST_JUST_IGNORE_COMPLETELY"
) + os.path.basename(args.csv)
else:
new_csv_filename = time.strftime(
"%Y-%m-%dT%H_%M_%S_") + os.path.basename(args.csv)
new_csv = os.path.join(desktop_logs_dir, new_csv_filename)
filmographic_dict, headers = ififuncs.extract_metadata(args.csv)
for oe_package in to_accession:
for filmographic_record in filmographic_dict:
if os.path.basename(oe_package).upper(
)[:2] + '-' + os.path.basename(
oe_package)[2:] == filmographic_record['Object Entry']:
filmographic_record['Reference Number'] = to_accession[
oe_package][1]
with open(new_csv, 'w') as csvfile:
fieldnames = headers
# Removes Object Entry from headings as it's not needed in database.
del fieldnames[1]
writer = csv.DictWriter(csvfile, fieldnames=fieldnames)
writer.writeheader()
for i in filmographic_dict:
i.pop('Object Entry', None)
# Only include records that have reference numbers
if not i['Reference Number'] == '':
writer.writerow(i)
if args.dryrun:
sys.exit()
proceed = ififuncs.ask_yes_no('Do you want to proceed?')
if proceed == 'Y':
for package in sorted(to_accession.keys(), key=natural_keys):
accession_cmd = [
package, '-user', user, '-pbcore', '-f', '-number',
to_accession[package][0], '-reference',
to_accession[package][1], '-register', register, '-csv',
new_csv
]
if len(to_accession[package]) == 3:
accession_cmd.extend(['-acquisition_type', '13'])
accession_cmd.extend(['-parent', order.main(package)])
else:
accession_cmd.extend(['-donor', donor])
accession_cmd.extend(
['-depositor_reference', depositor_reference])
accession_cmd.extend(
['-acquisition_type', acquisition_type[2]])
print accession_cmd
accession.main(accession_cmd)
collated_pbcore = gather_metadata(args.input)
sorted_filepath = ififuncs.sort_csv(register, 'accession number')
print '\nA helper accessions register has been generated in order to help with registration - located here: %s' % sorted_filepath
print '\nA modified filmographic CSV has been generated with added reference numbers - located here: %s' % new_csv
print '\nA collated CSV consisting of each PBCore report has been generated for batch database import - located here: %s' % collated_pbcore
def main(args_):
'''
Launches the various functions that will accession a package
'''
args = parse_args(args_)
source = args.input
uuid_directory = ififuncs.check_for_sip([source])
if uuid_directory is not None:
oe_path = os.path.dirname(uuid_directory)
oe_number = os.path.basename(oe_path)
if args.user:
user = args.user
else:
user = ififuncs.get_user()
if args.number:
if args.number[:3] != 'aaa':
print 'First three characters must be \'aaa\' and last four characters must be four digits'
accession_number = ififuncs.get_accession_number()
elif len(args.number[3:]) != 4:
accession_number = ififuncs.get_accession_number()
print 'First three characters must be \'aaa\' and last four characters must be four digits'
elif not args.number[3:].isdigit():
accession_number = ififuncs.get_accession_number()
print 'First three characters must be \'aaa\' and last four characters must be four digits'
else:
accession_number = args.number
else:
accession_number = ififuncs.get_accession_number()
if args.pbcore:
if args.reference:
Reference_Number = args.reference.upper()
else:
Reference_Number = ififuncs.get_reference_number()
accession_path = os.path.join(os.path.dirname(oe_path),
accession_number)
uuid = os.path.basename(uuid_directory)
new_uuid_path = os.path.join(accession_path, uuid)
logs_dir = os.path.join(new_uuid_path, 'logs')
sipcreator_log = os.path.join(logs_dir, uuid) + '_sip_log.log'
if args.force:
proceed = 'Y'
else:
proceed = ififuncs.ask_yes_no('Do you want to rename %s with %s' %
(oe_number, accession_number))
if proceed == 'Y':
os.rename(oe_path, accession_path)
if args.register:
register = args.register
else:
register = make_register()
ififuncs.append_csv(register,
(oe_number.upper()[:2] + '-' + oe_number[2:6],
accession_number, '', '', '', '', ''))
ififuncs.generate_log(sipcreator_log, 'EVENT = accession.py started')
ififuncs.generate_log(
sipcreator_log, 'eventDetail=accession.py %s' %
ififuncs.get_script_version('accession.py'))
ififuncs.generate_log(sipcreator_log,
'Command line arguments: %s' % args)
ififuncs.generate_log(sipcreator_log, 'EVENT = agentName=%s' % user)
ififuncs.generate_log(
sipcreator_log, 'EVENT = eventType=Identifier assignment,'
' eventIdentifierType=accession number, value=%s' %
accession_number)
ififuncs.generate_log(
sipcreator_log, 'EVENT = eventType=accession,'
' eventIdentifierType=accession number, value=%s' %
accession_number)
sip_manifest = os.path.join(accession_path, uuid) + '_manifest.md5'
sha512_log = manifest.main([new_uuid_path, '-sha512', '-s'])
sha512_manifest = os.path.join(os.path.dirname(new_uuid_path),
uuid + '_manifest-sha512.txt')
ififuncs.merge_logs_append(sha512_log, sipcreator_log, sip_manifest)
os.remove(sha512_log)
print('Generating Digital Forensics XML')
dfxml = make_dfxml(args, new_uuid_path, uuid)
ififuncs.generate_log(
sipcreator_log,
'EVENT = Metadata extraction - eventDetail=File system metadata extraction using Digital Forensics XML, eventOutcome=%s, agentName=makedfxml'
% (dfxml))
ififuncs.generate_log(sipcreator_log, 'EVENT = accession.py finished')
ififuncs.checksum_replace(sip_manifest, sipcreator_log, 'md5')
ififuncs.checksum_replace(sha512_manifest, sipcreator_log, 'sha512')
ififuncs.manifest_update(sip_manifest, dfxml)
ififuncs.sha512_update(sha512_manifest, dfxml)
if args.pbcore:
makepbcore.main([
accession_path, '-p', '-user', user, '-reference',
Reference_Number
])
else:
print 'not a valid package. The input should include a package that has been through Object Entry'
