Beispiel #1
0
    def __init__(self, shell, headless, workflow_cmdline_args,
                 project_creation_args, *args, **kwargs):

        # Create a graph to be shared by all operators
        graph = Graph()
        super(LayerViewerWorkflow, self).__init__(shell,
                                                  headless,
                                                  workflow_cmdline_args,
                                                  project_creation_args,
                                                  graph=graph,
                                                  *args,
                                                  **kwargs)
        self._applets = []

        # Create applets
        self.dataSelectionApplet = DataSelectionApplet(
            self,
            "Input Data",
            "Input Data",
            supportIlastik05Import=True,
            forceAxisOrder='tzyxc')
        self.viewerApplet = LayerViewerApplet(self)
        self.dataExportApplet = DataExportApplet(self, "Data Export")
        opDataExport = self.dataExportApplet.topLevelOperator
        opDataExport.SelectionNames.setValue(['Raw Data', 'Other Data'])

        opDataSelection = self.dataSelectionApplet.topLevelOperator
        opDataSelection.DatasetRoles.setValue(["Raw Data", "Other Data"])

        self._applets.append(self.dataSelectionApplet)
        self._applets.append(self.viewerApplet)
        self._applets.append(self.dataExportApplet)

        self._workflow_cmdline_args = workflow_cmdline_args
    def __init__(self, headless, workflow_cmdline_args, *args, **kwargs):
        
        # Create a graph to be shared by all operators
        graph = Graph()
        super(LayerViewerWorkflow, self).__init__(headless, graph=graph, *args, **kwargs)
        self._applets = []

        # Create applets 
        self.dataSelectionApplet = DataSelectionApplet(self, 
                                                       "Input Data", 
                                                       "Input Data", 
                                                       supportIlastik05Import=True, 
                                                       batchDataGui=False,
                                                       force5d=True)
        self.viewerApplet = LayerViewerApplet(self)
        self.dataExportApplet = DataExportApplet(self, "Data Export")

        opDataSelection = self.dataSelectionApplet.topLevelOperator
        opDataSelection.DatasetRoles.setValue( ["Raw Data", "Other Data"] )

        self._applets.append( self.dataSelectionApplet )
        self._applets.append( self.viewerApplet )
        self._applets.append( self.dataExportApplet )

        self._workflow_cmdline_args = workflow_cmdline_args
Beispiel #3
0
    def __init__(self, shell, headless, workflow_cmdline_args,
                 project_creation_args, *args, **kwargs):

        # Create a graph to be shared by all operators
        graph = Graph()
        super(LayerViewerWorkflow, self).__init__(shell,
                                                  headless,
                                                  workflow_cmdline_args,
                                                  project_creation_args,
                                                  graph=graph,
                                                  *args,
                                                  **kwargs)
        self._applets = []

        # Roles

        # Create applets
        self.dataSelectionApplet = DataSelectionApplet(self, "Input Data",
                                                       "Input Data")
        self.viewerApplet = LayerViewerApplet(self)
        self.dataExportApplet = DataExportApplet(self, "Data Export")
        opDataExport = self.dataExportApplet.topLevelOperator
        opDataExport.SelectionNames.setValue(ROLES)

        opDataSelection = self.dataSelectionApplet.topLevelOperator
        opDataSelection.DatasetRoles.setValue(ROLES)

        self._applets.append(self.dataSelectionApplet)
        self._applets.append(self.viewerApplet)
        self._applets.append(self.dataExportApplet)

        self._workflow_cmdline_args = workflow_cmdline_args
    def __init__(self):
        super(LayerViewerWorkflow, self).__init__()
        self._applets = []

        # Create a graph to be shared by all operators
        graph = Graph()

        # Create applets
        self.dataSelectionApplet = DataSelectionApplet(
            graph,
            "Input Data",
            "Input Data",
            supportIlastik05Import=True,
            batchDataGui=False)
        self.viewerApplet = LayerViewerApplet(graph)

        self._applets.append(self.dataSelectionApplet)
        self._applets.append(self.viewerApplet)

        # Connect top-level operators
        self.viewerApplet.topLevelOperator.RawInput.connect(
            self.dataSelectionApplet.topLevelOperator.Image)