class Ui_MainWindow(object):
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(800, 482)
MainWindow.setMinimumSize(QtCore.QSize(800, 0))
self.centralwidget = QtGui.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayout_2 = QtGui.QVBoxLayout(self.centralwidget)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.gridLayout = QtGui.QGridLayout()
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtGui.QLabel(self.centralwidget)
self.label_4.setEnabled(True)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 1, 0, 1, 1)
self.iv_original = ImageView(self.centralwidget)
sizePolicy = QtGui.QSizePolicy(QtGui.QSizePolicy.Ignored, QtGui.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.iv_original.sizePolicy().hasHeightForWidth())
self.iv_original.setSizePolicy(sizePolicy)
self.iv_original.setObjectName("iv_original")
self.gridLayout.addWidget(self.iv_original, 2, 0, 1, 1)
self.iv_processed = ImageView(self.centralwidget)
sizePolicy = QtGui.QSizePolicy(QtGui.QSizePolicy.Ignored, QtGui.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.iv_processed.sizePolicy().hasHeightForWidth())
self.iv_processed.setSizePolicy(sizePolicy)
self.iv_processed.setObjectName("iv_processed")
self.gridLayout.addWidget(self.iv_processed, 2, 1, 1, 1)
self.label_5 = QtGui.QLabel(self.centralwidget)
self.label_5.setObjectName("label_5")
self.gridLayout.addWidget(self.label_5, 1, 1, 1, 1)
self.verticalLayout_2.addLayout(self.gridLayout)
self.line = QtGui.QFrame(self.centralwidget)
self.line.setFrameShape(QtGui.QFrame.HLine)
self.line.setFrameShadow(QtGui.QFrame.Sunken)
self.line.setObjectName("line")
self.verticalLayout_2.addWidget(self.line)
self.StatusBarLayout = QtGui.QHBoxLayout()
self.StatusBarLayout.setObjectName("StatusBarLayout")
self.PositionLayout = QtGui.QHBoxLayout()
self.PositionLayout.setObjectName("PositionLayout")
self.label = QtGui.QLabel(self.centralwidget)
self.label.setObjectName("label")
self.PositionLayout.addWidget(self.label)
self.lbl_position = QtGui.QLabel(self.centralwidget)
self.lbl_position.setText("")
self.lbl_position.setObjectName("lbl_position")
self.PositionLayout.addWidget(self.lbl_position)
spacerItem = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.PositionLayout.addItem(spacerItem)
self.StatusBarLayout.addLayout(self.PositionLayout)
self.OriginalColorLayout = QtGui.QHBoxLayout()
self.OriginalColorLayout.setObjectName("OriginalColorLayout")
self.label_2 = QtGui.QLabel(self.centralwidget)
self.label_2.setObjectName("label_2")
self.OriginalColorLayout.addWidget(self.label_2)
self.lbl_original_color = QtGui.QLabel(self.centralwidget)
self.lbl_original_color.setText("")
self.lbl_original_color.setObjectName("lbl_original_color")
self.OriginalColorLayout.addWidget(self.lbl_original_color)
spacerItem1 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.OriginalColorLayout.addItem(spacerItem1)
self.StatusBarLayout.addLayout(self.OriginalColorLayout)
self.ProcessedColorLayout = QtGui.QHBoxLayout()
self.ProcessedColorLayout.setObjectName("ProcessedColorLayout")
self.label_3 = QtGui.QLabel(self.centralwidget)
self.label_3.setObjectName("label_3")
self.ProcessedColorLayout.addWidget(self.label_3)
self.lbl_processed_color = QtGui.QLabel(self.centralwidget)
self.lbl_processed_color.setText("")
self.lbl_processed_color.setObjectName("lbl_processed_color")
self.ProcessedColorLayout.addWidget(self.lbl_processed_color)
spacerItem2 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.ProcessedColorLayout.addItem(spacerItem2)
self.StatusBarLayout.addLayout(self.ProcessedColorLayout)
self.SelectedColorLayout = QtGui.QHBoxLayout()
self.SelectedColorLayout.setObjectName("SelectedColorLayout")
self.label_7 = QtGui.QLabel(self.centralwidget)
self.label_7.setObjectName("label_7")
self.SelectedColorLayout.addWidget(self.label_7)
self.lbl_selected_color = QtGui.QLabel(self.centralwidget)
self.lbl_selected_color.setObjectName("lbl_selected_color")
self.SelectedColorLayout.addWidget(self.lbl_selected_color)
spacerItem3 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.SelectedColorLayout.addItem(spacerItem3)
self.PositionLayout_2 = QtGui.QHBoxLayout()
self.PositionLayout_2.setObjectName("PositionLayout_2")
self.label_6 = QtGui.QLabel(self.centralwidget)
self.label_6.setObjectName("label_6")
self.PositionLayout_2.addWidget(self.label_6)
self.lbl_zoom = QtGui.QLabel(self.centralwidget)
self.lbl_zoom.setObjectName("lbl_zoom")
self.PositionLayout_2.addWidget(self.lbl_zoom)
self.SelectedColorLayout.addLayout(self.PositionLayout_2)
self.StatusBarLayout.addLayout(self.SelectedColorLayout)
self.verticalLayout_2.addLayout(self.StatusBarLayout)
MainWindow.setCentralWidget(self.centralwidget)
self.menubar = QtGui.QMenuBar(MainWindow)
self.menubar.setGeometry(QtCore.QRect(0, 0, 800, 27))
self.menubar.setObjectName("menubar")
self.menuFile = QtGui.QMenu(self.menubar)
self.menuFile.setObjectName("menuFile")
self.menuColors = QtGui.QMenu(self.menubar)
self.menuColors.setObjectName("menuColors")
self.menuZoom = QtGui.QMenu(self.menubar)
self.menuZoom.setObjectName("menuZoom")
self.menuProcessing = QtGui.QMenu(self.menubar)
self.menuProcessing.setObjectName("menuProcessing")
self.menuEdit = QtGui.QMenu(self.menubar)
self.menuEdit.setObjectName("menuEdit")
MainWindow.setMenuBar(self.menubar)
self.action_open = QtGui.QAction(MainWindow)
self.action_open.setObjectName("action_open")
self.action_save = QtGui.QAction(MainWindow)
self.action_save.setObjectName("action_save")
self.action_quit = QtGui.QAction(MainWindow)
self.action_quit.setObjectName("action_quit")
self.action_select_pen_color = QtGui.QAction(MainWindow)
self.action_select_pen_color.setObjectName("action_select_pen_color")
self.action_filter_red = QtGui.QAction(MainWindow)
self.action_filter_red.setCheckable(False)
self.action_filter_red.setChecked(False)
self.action_filter_red.setObjectName("action_filter_red")
self.action_filter_green = QtGui.QAction(MainWindow)
self.action_filter_green.setCheckable(False)
self.action_filter_green.setChecked(False)
self.action_filter_green.setObjectName("action_filter_green")
self.action_filter_blue = QtGui.QAction(MainWindow)
self.action_filter_blue.setCheckable(False)
self.action_filter_blue.setChecked(False)
self.action_filter_blue.setObjectName("action_filter_blue")
self.action_zoom_in = QtGui.QAction(MainWindow)
self.action_zoom_in.setSoftKeyRole(QtGui.QAction.NoSoftKey)
self.action_zoom_in.setObjectName("action_zoom_in")
self.action_zoom_out = QtGui.QAction(MainWindow)
self.action_zoom_out.setObjectName("action_zoom_out")
self.action_exp = QtGui.QAction(MainWindow)
self.action_exp.setObjectName("action_exp")
self.action_revert = QtGui.QAction(MainWindow)
self.action_revert.setObjectName("action_revert")
self.action_histogram = QtGui.QAction(MainWindow)
self.action_histogram.setObjectName("action_histogram")
self.action_log = QtGui.QAction(MainWindow)
self.action_log.setObjectName("action_log")
self.action_hist_stretch = QtGui.QAction(MainWindow)
self.action_hist_stretch.setObjectName("action_hist_stretch")
self.action_hist_eq = QtGui.QAction(MainWindow)
self.action_hist_eq.setObjectName("action_hist_eq")
self.action_grayscale = QtGui.QAction(MainWindow)
self.action_grayscale.setObjectName("action_grayscale")
self.action_custom_thresholding = QtGui.QAction(MainWindow)
self.action_custom_thresholding.setObjectName("action_custom_thresholding")
self.action_otsu_thresholding = QtGui.QAction(MainWindow)
self.action_otsu_thresholding.setObjectName("action_otsu_thresholding")
self.action_niblack_thresholding = QtGui.QAction(MainWindow)
self.action_niblack_thresholding.setObjectName("action_niblack_thresholding")
self.action_linear_filter = QtGui.QAction(MainWindow)
self.action_linear_filter.setObjectName("action_linear_filter")
self.action_median_filter = QtGui.QAction(MainWindow)
self.action_median_filter.setObjectName("action_median_filter")
self.action_kuwahara_filter = QtGui.QAction(MainWindow)
self.action_kuwahara_filter.setObjectName("action_kuwahara_filter")
self.menuFile.addAction(self.action_open)
self.menuFile.addAction(self.action_save)
self.menuFile.addSeparator()
self.menuFile.addAction(self.action_quit)
self.menuColors.addAction(self.action_select_pen_color)
self.menuColors.addSeparator()
self.menuColors.addAction(self.action_filter_red)
self.menuColors.addAction(self.action_filter_green)
self.menuColors.addAction(self.action_filter_blue)
self.menuColors.addAction(self.action_grayscale)
self.menuColors.addSeparator()
self.menuColors.addAction(self.action_histogram)
self.menuZoom.addAction(self.action_zoom_in)
self.menuZoom.addAction(self.action_zoom_out)
self.menuProcessing.addAction(self.action_exp)
self.menuProcessing.addAction(self.action_log)
self.menuProcessing.addAction(self.action_hist_stretch)
self.menuProcessing.addAction(self.action_hist_eq)
self.menuProcessing.addSeparator()
self.menuProcessing.addAction(self.action_custom_thresholding)
self.menuProcessing.addAction(self.action_otsu_thresholding)
self.menuProcessing.addAction(self.action_niblack_thresholding)
self.menuProcessing.addSeparator()
self.menuProcessing.addAction(self.action_linear_filter)
self.menuProcessing.addAction(self.action_median_filter)
self.menuProcessing.addAction(self.action_kuwahara_filter)
self.menuEdit.addAction(self.action_revert)
self.menubar.addAction(self.menuFile.menuAction())
self.menubar.addAction(self.menuEdit.menuAction())
self.menubar.addAction(self.menuColors.menuAction())
self.menubar.addAction(self.menuZoom.menuAction())
self.menubar.addAction(self.menuProcessing.menuAction())
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
def retranslateUi(self, MainWindow):
MainWindow.setWindowTitle(QtGui.QApplication.translate("MainWindow", "Image editor", None, QtGui.QApplication.UnicodeUTF8))
self.label_4.setText(QtGui.QApplication.translate("MainWindow", "Original image", None, QtGui.QApplication.UnicodeUTF8))
self.label_5.setText(QtGui.QApplication.translate("MainWindow", "Processed image", None, QtGui.QApplication.UnicodeUTF8))
self.label.setText(QtGui.QApplication.translate("MainWindow", "Position:", None, QtGui.QApplication.UnicodeUTF8))
self.label_2.setText(QtGui.QApplication.translate("MainWindow", "Original color:", None, QtGui.QApplication.UnicodeUTF8))
self.label_3.setText(QtGui.QApplication.translate("MainWindow", "Processed color:", None, QtGui.QApplication.UnicodeUTF8))
self.label_7.setText(QtGui.QApplication.translate("MainWindow", "Selected color:", None, QtGui.QApplication.UnicodeUTF8))
self.lbl_selected_color.setText(QtGui.QApplication.translate("MainWindow", "R:255 G:255 B:255", None, QtGui.QApplication.UnicodeUTF8))
self.label_6.setText(QtGui.QApplication.translate("MainWindow", "Zoom:", None, QtGui.QApplication.UnicodeUTF8))
self.lbl_zoom.setText(QtGui.QApplication.translate("MainWindow", "x1.0", None, QtGui.QApplication.UnicodeUTF8))
self.menuFile.setTitle(QtGui.QApplication.translate("MainWindow", "File", None, QtGui.QApplication.UnicodeUTF8))
self.menuColors.setTitle(QtGui.QApplication.translate("MainWindow", "Colors", None, QtGui.QApplication.UnicodeUTF8))
self.menuZoom.setTitle(QtGui.QApplication.translate("MainWindow", "Zoom", None, QtGui.QApplication.UnicodeUTF8))
self.menuProcessing.setTitle(QtGui.QApplication.translate("MainWindow", "Processing", None, QtGui.QApplication.UnicodeUTF8))
self.menuEdit.setTitle(QtGui.QApplication.translate("MainWindow", "Edit", None, QtGui.QApplication.UnicodeUTF8))
self.action_open.setText(QtGui.QApplication.translate("MainWindow", "Open", None, QtGui.QApplication.UnicodeUTF8))
self.action_open.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+O", None, QtGui.QApplication.UnicodeUTF8))
self.action_save.setText(QtGui.QApplication.translate("MainWindow", "Save", None, QtGui.QApplication.UnicodeUTF8))
self.action_save.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+S", None, QtGui.QApplication.UnicodeUTF8))
self.action_quit.setText(QtGui.QApplication.translate("MainWindow", "Quit", None, QtGui.QApplication.UnicodeUTF8))
self.action_quit.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+Q", None, QtGui.QApplication.UnicodeUTF8))
self.action_select_pen_color.setText(QtGui.QApplication.translate("MainWindow", "Select pen color", None, QtGui.QApplication.UnicodeUTF8))
self.action_filter_red.setText(QtGui.QApplication.translate("MainWindow", "Filter red", None, QtGui.QApplication.UnicodeUTF8))
self.action_filter_green.setText(QtGui.QApplication.translate("MainWindow", "Filter green", None, QtGui.QApplication.UnicodeUTF8))
self.action_filter_blue.setText(QtGui.QApplication.translate("MainWindow", "Filter blue", None, QtGui.QApplication.UnicodeUTF8))
self.action_zoom_in.setText(QtGui.QApplication.translate("MainWindow", "Zoom in", None, QtGui.QApplication.UnicodeUTF8))
self.action_zoom_in.setShortcut(QtGui.QApplication.translate("MainWindow", "+", None, QtGui.QApplication.UnicodeUTF8))
self.action_zoom_out.setText(QtGui.QApplication.translate("MainWindow", "Zoom out", None, QtGui.QApplication.UnicodeUTF8))
self.action_zoom_out.setShortcut(QtGui.QApplication.translate("MainWindow", "-", None, QtGui.QApplication.UnicodeUTF8))
self.action_exp.setText(QtGui.QApplication.translate("MainWindow", "Exponential function", None, QtGui.QApplication.UnicodeUTF8))
self.action_revert.setText(QtGui.QApplication.translate("MainWindow", "Revert changes", None, QtGui.QApplication.UnicodeUTF8))
self.action_histogram.setText(QtGui.QApplication.translate("MainWindow", "Show histogram", None, QtGui.QApplication.UnicodeUTF8))
self.action_log.setText(QtGui.QApplication.translate("MainWindow", "Logarithmic function", None, QtGui.QApplication.UnicodeUTF8))
self.action_hist_stretch.setText(QtGui.QApplication.translate("MainWindow", "Histogram stretching", None, QtGui.QApplication.UnicodeUTF8))
self.action_hist_eq.setText(QtGui.QApplication.translate("MainWindow", "Histogram equalization", None, QtGui.QApplication.UnicodeUTF8))
self.action_grayscale.setText(QtGui.QApplication.translate("MainWindow", "Grayscale", None, QtGui.QApplication.UnicodeUTF8))
self.action_custom_thresholding.setText(QtGui.QApplication.translate("MainWindow", "Custom thresholding", None, QtGui.QApplication.UnicodeUTF8))
self.action_otsu_thresholding.setText(QtGui.QApplication.translate("MainWindow", "Otsu thresholding", None, QtGui.QApplication.UnicodeUTF8))
self.action_niblack_thresholding.setText(QtGui.QApplication.translate("MainWindow", "Niblack thresholding", None, QtGui.QApplication.UnicodeUTF8))
self.action_linear_filter.setText(QtGui.QApplication.translate("MainWindow", "Linear Filter", None, QtGui.QApplication.UnicodeUTF8))
self.action_median_filter.setText(QtGui.QApplication.translate("MainWindow", "Median Filter", None, QtGui.QApplication.UnicodeUTF8))
self.action_kuwahara_filter.setText(QtGui.QApplication.translate("MainWindow", "Kuwahara Filter", None, QtGui.QApplication.UnicodeUTF8))
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(800, 482)
MainWindow.setMinimumSize(QtCore.QSize(800, 0))
self.centralwidget = QtGui.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayout_2 = QtGui.QVBoxLayout(self.centralwidget)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.gridLayout = QtGui.QGridLayout()
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtGui.QLabel(self.centralwidget)
self.label_4.setEnabled(True)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 1, 0, 1, 1)
self.iv_original = ImageView(self.centralwidget)
sizePolicy = QtGui.QSizePolicy(QtGui.QSizePolicy.Ignored, QtGui.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.iv_original.sizePolicy().hasHeightForWidth())
self.iv_original.setSizePolicy(sizePolicy)
self.iv_original.setObjectName("iv_original")
self.gridLayout.addWidget(self.iv_original, 2, 0, 1, 1)
self.iv_processed = ImageView(self.centralwidget)
sizePolicy = QtGui.QSizePolicy(QtGui.QSizePolicy.Ignored, QtGui.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.iv_processed.sizePolicy().hasHeightForWidth())
self.iv_processed.setSizePolicy(sizePolicy)
self.iv_processed.setObjectName("iv_processed")
self.gridLayout.addWidget(self.iv_processed, 2, 1, 1, 1)
self.label_5 = QtGui.QLabel(self.centralwidget)
self.label_5.setObjectName("label_5")
self.gridLayout.addWidget(self.label_5, 1, 1, 1, 1)
self.verticalLayout_2.addLayout(self.gridLayout)
self.line = QtGui.QFrame(self.centralwidget)
self.line.setFrameShape(QtGui.QFrame.HLine)
self.line.setFrameShadow(QtGui.QFrame.Sunken)
self.line.setObjectName("line")
self.verticalLayout_2.addWidget(self.line)
self.StatusBarLayout = QtGui.QHBoxLayout()
self.StatusBarLayout.setObjectName("StatusBarLayout")
self.PositionLayout = QtGui.QHBoxLayout()
self.PositionLayout.setObjectName("PositionLayout")
self.label = QtGui.QLabel(self.centralwidget)
self.label.setObjectName("label")
self.PositionLayout.addWidget(self.label)
self.lbl_position = QtGui.QLabel(self.centralwidget)
self.lbl_position.setText("")
self.lbl_position.setObjectName("lbl_position")
self.PositionLayout.addWidget(self.lbl_position)
spacerItem = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.PositionLayout.addItem(spacerItem)
self.StatusBarLayout.addLayout(self.PositionLayout)
self.OriginalColorLayout = QtGui.QHBoxLayout()
self.OriginalColorLayout.setObjectName("OriginalColorLayout")
self.label_2 = QtGui.QLabel(self.centralwidget)
self.label_2.setObjectName("label_2")
self.OriginalColorLayout.addWidget(self.label_2)
self.lbl_original_color = QtGui.QLabel(self.centralwidget)
self.lbl_original_color.setText("")
self.lbl_original_color.setObjectName("lbl_original_color")
self.OriginalColorLayout.addWidget(self.lbl_original_color)
spacerItem1 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.OriginalColorLayout.addItem(spacerItem1)
self.StatusBarLayout.addLayout(self.OriginalColorLayout)
self.ProcessedColorLayout = QtGui.QHBoxLayout()
self.ProcessedColorLayout.setObjectName("ProcessedColorLayout")
self.label_3 = QtGui.QLabel(self.centralwidget)
self.label_3.setObjectName("label_3")
self.ProcessedColorLayout.addWidget(self.label_3)
self.lbl_processed_color = QtGui.QLabel(self.centralwidget)
self.lbl_processed_color.setText("")
self.lbl_processed_color.setObjectName("lbl_processed_color")
self.ProcessedColorLayout.addWidget(self.lbl_processed_color)
spacerItem2 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.ProcessedColorLayout.addItem(spacerItem2)
self.StatusBarLayout.addLayout(self.ProcessedColorLayout)
self.SelectedColorLayout = QtGui.QHBoxLayout()
self.SelectedColorLayout.setObjectName("SelectedColorLayout")
self.label_7 = QtGui.QLabel(self.centralwidget)
self.label_7.setObjectName("label_7")
self.SelectedColorLayout.addWidget(self.label_7)
self.lbl_selected_color = QtGui.QLabel(self.centralwidget)
self.lbl_selected_color.setObjectName("lbl_selected_color")
self.SelectedColorLayout.addWidget(self.lbl_selected_color)
spacerItem3 = QtGui.QSpacerItem(40, 20, QtGui.QSizePolicy.Expanding, QtGui.QSizePolicy.Minimum)
self.SelectedColorLayout.addItem(spacerItem3)
self.PositionLayout_2 = QtGui.QHBoxLayout()
self.PositionLayout_2.setObjectName("PositionLayout_2")
self.label_6 = QtGui.QLabel(self.centralwidget)
self.label_6.setObjectName("label_6")
self.PositionLayout_2.addWidget(self.label_6)
self.lbl_zoom = QtGui.QLabel(self.centralwidget)
self.lbl_zoom.setObjectName("lbl_zoom")
self.PositionLayout_2.addWidget(self.lbl_zoom)
self.SelectedColorLayout.addLayout(self.PositionLayout_2)
self.StatusBarLayout.addLayout(self.SelectedColorLayout)
self.verticalLayout_2.addLayout(self.StatusBarLayout)
MainWindow.setCentralWidget(self.centralwidget)
self.menubar = QtGui.QMenuBar(MainWindow)
self.menubar.setGeometry(QtCore.QRect(0, 0, 800, 27))
self.menubar.setObjectName("menubar")
self.menuFile = QtGui.QMenu(self.menubar)
self.menuFile.setObjectName("menuFile")
self.menuColors = QtGui.QMenu(self.menubar)
self.menuColors.setObjectName("menuColors")
self.menuZoom = QtGui.QMenu(self.menubar)
self.menuZoom.setObjectName("menuZoom")
self.menuProcessing = QtGui.QMenu(self.menubar)
self.menuProcessing.setObjectName("menuProcessing")
self.menuEdit = QtGui.QMenu(self.menubar)
self.menuEdit.setObjectName("menuEdit")
MainWindow.setMenuBar(self.menubar)
self.action_open = QtGui.QAction(MainWindow)
self.action_open.setObjectName("action_open")
self.action_save = QtGui.QAction(MainWindow)
self.action_save.setObjectName("action_save")
self.action_quit = QtGui.QAction(MainWindow)
self.action_quit.setObjectName("action_quit")
self.action_select_pen_color = QtGui.QAction(MainWindow)
self.action_select_pen_color.setObjectName("action_select_pen_color")
self.action_filter_red = QtGui.QAction(MainWindow)
self.action_filter_red.setCheckable(False)
self.action_filter_red.setChecked(False)
self.action_filter_red.setObjectName("action_filter_red")
self.action_filter_green = QtGui.QAction(MainWindow)
self.action_filter_green.setCheckable(False)
self.action_filter_green.setChecked(False)
self.action_filter_green.setObjectName("action_filter_green")
self.action_filter_blue = QtGui.QAction(MainWindow)
self.action_filter_blue.setCheckable(False)
self.action_filter_blue.setChecked(False)
self.action_filter_blue.setObjectName("action_filter_blue")
self.action_zoom_in = QtGui.QAction(MainWindow)
self.action_zoom_in.setSoftKeyRole(QtGui.QAction.NoSoftKey)
self.action_zoom_in.setObjectName("action_zoom_in")
self.action_zoom_out = QtGui.QAction(MainWindow)
self.action_zoom_out.setObjectName("action_zoom_out")
self.action_exp = QtGui.QAction(MainWindow)
self.action_exp.setObjectName("action_exp")
self.action_revert = QtGui.QAction(MainWindow)
self.action_revert.setObjectName("action_revert")
self.action_histogram = QtGui.QAction(MainWindow)
self.action_histogram.setObjectName("action_histogram")
self.action_log = QtGui.QAction(MainWindow)
self.action_log.setObjectName("action_log")
self.action_hist_stretch = QtGui.QAction(MainWindow)
self.action_hist_stretch.setObjectName("action_hist_stretch")
self.action_hist_eq = QtGui.QAction(MainWindow)
self.action_hist_eq.setObjectName("action_hist_eq")
self.action_grayscale = QtGui.QAction(MainWindow)
self.action_grayscale.setObjectName("action_grayscale")
self.action_custom_thresholding = QtGui.QAction(MainWindow)
self.action_custom_thresholding.setObjectName("action_custom_thresholding")
self.action_otsu_thresholding = QtGui.QAction(MainWindow)
self.action_otsu_thresholding.setObjectName("action_otsu_thresholding")
self.action_niblack_thresholding = QtGui.QAction(MainWindow)
self.action_niblack_thresholding.setObjectName("action_niblack_thresholding")
self.action_linear_filter = QtGui.QAction(MainWindow)
self.action_linear_filter.setObjectName("action_linear_filter")
self.action_median_filter = QtGui.QAction(MainWindow)
self.action_median_filter.setObjectName("action_median_filter")
self.action_kuwahara_filter = QtGui.QAction(MainWindow)
self.action_kuwahara_filter.setObjectName("action_kuwahara_filter")
self.menuFile.addAction(self.action_open)
self.menuFile.addAction(self.action_save)
self.menuFile.addSeparator()
self.menuFile.addAction(self.action_quit)
self.menuColors.addAction(self.action_select_pen_color)
self.menuColors.addSeparator()
self.menuColors.addAction(self.action_filter_red)
self.menuColors.addAction(self.action_filter_green)
self.menuColors.addAction(self.action_filter_blue)
self.menuColors.addAction(self.action_grayscale)
self.menuColors.addSeparator()
self.menuColors.addAction(self.action_histogram)
self.menuZoom.addAction(self.action_zoom_in)
self.menuZoom.addAction(self.action_zoom_out)
self.menuProcessing.addAction(self.action_exp)
self.menuProcessing.addAction(self.action_log)
self.menuProcessing.addAction(self.action_hist_stretch)
self.menuProcessing.addAction(self.action_hist_eq)
self.menuProcessing.addSeparator()
self.menuProcessing.addAction(self.action_custom_thresholding)
self.menuProcessing.addAction(self.action_otsu_thresholding)
self.menuProcessing.addAction(self.action_niblack_thresholding)
self.menuProcessing.addSeparator()
self.menuProcessing.addAction(self.action_linear_filter)
self.menuProcessing.addAction(self.action_median_filter)
self.menuProcessing.addAction(self.action_kuwahara_filter)
self.menuEdit.addAction(self.action_revert)
self.menubar.addAction(self.menuFile.menuAction())
self.menubar.addAction(self.menuEdit.menuAction())
self.menubar.addAction(self.menuColors.menuAction())
self.menubar.addAction(self.menuZoom.menuAction())
self.menubar.addAction(self.menuProcessing.menuAction())
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
def createImgView(self):
self.imgView = ImageView(self)
self.MDI.addSubWindow(self.imgView)
self.imgView.show()
class TMSControl(QMainWindow):
imageChanged = pyqtSignal(str)
def __init__(self, ROIs=None, parent=None):
QMainWindow.__init__(self, parent)
self.setWindowTitle('TMS Parameter Control')
self.imgfile = None
self.ROInames = []
if ROIs != None:
self.ROIs = []
for i in range(len(ROIs)):
self.ROIs.append(ROIs[i].ROI)
self.ROInames.append('ROI_%d'%(i+1))
else:
self.ROIs = []
self.createMainFrame()
self.createImgView()
self.createMenu()
def createMainFrame(self):
self.mainFrame = QWidget()
self.MDI = QMdiArea()
self.view = QTreeWidget()
self.view.setColumnCount(4)
self.view.setHeaderLabels(['Filename', 'Condition', 'TMS', 'Baseline'])
listLabel = QLabel('Check frames with stimulation:')
self.showBarPlot = QPushButton('Show Results')
self.view.itemDoubleClicked.connect(self.onSelect)
self.showBarPlot.clicked.connect(self.onPlot)
vbox = QVBoxLayout()
vbox.addWidget(listLabel)
vbox.addWidget(self.view)
vbox.addWidget(self.showBarPlot)
hbox = QHBoxLayout()
hbox.addLayout(vbox)
hbox.addWidget(self.MDI)
self.mainFrame.setLayout(hbox)
self.setCentralWidget(self.mainFrame)
def createImgView(self):
self.imgView = ImageView(self)
self.MDI.addSubWindow(self.imgView)
self.imgView.show()
def createMenu(self):
'''
Creates the file menu
'''
self.file_menu = self.menuBar().addMenu("&File")
load_action = self.create_action("&Open Images",
shortcut="Ctrl+O", slot=self.onOpen,
tip="Open a set of image directories")
save_ROI_action = self.create_action("&Save ROIs", slot=self.onSaveROIs,
shortcut="Ctrl+R", tip="Save each ROI to a .npy file")
load_ROI_action = self.create_action("&Load ROI",
shortcut="Ctrl+L", slot=self.onLoadROI,
tip="Load ROIs from files")
export_action = self.create_action("&Export Results", slot=self.onExport,
shortcut="Ctrl+S", tip="Export results to file")
colormap_action = self.create_action("Export &Activations", slot=self.onExportActivations,
shortcut="Ctrl+C", tip="Export activation images to csv files")
quit_action = self.create_action("&Quit", slot=self.close,
shortcut="Ctrl+Q", tip="Close the application")
roi_from_img_action = self.create_action("&ROI from images", slot=self.onROIfromImg,
tip="Use TMS images to define an ROI")
self.settings_menu = self.menuBar().addMenu("&Settings")
save_settings_action = self.create_action("Save Se&ttings",
slot=self.onSaveSettings, tip="Save check settings")
load_settings_action = self.create_action("&Load Settings",
slot=self.onLoadSettings, tip="Load a settings file")
self.add_actions(self.file_menu, (load_action, save_ROI_action, load_ROI_action, roi_from_img_action,
None, export_action, colormap_action, None, quit_action))
self.add_actions(self.settings_menu, (save_settings_action, load_settings_action))
def add_actions(self, target, actions):
'''
Adds the actions to the file menu
'''
for action in actions:
if action is None:
target.addSeparator()
else:
target.addAction(action)
def create_action( self, text, slot=None, shortcut=None,
icon=None, tip=None, checkable=False,
signal="triggered()"):
'''
Creates actions for the file menu
'''
action = QAction(text, self)
if icon is not None:
action.setIcon(QIcon(":/%s.png" % icon))
if shortcut is not None:
action.setShortcut(shortcut)
if tip is not None:
action.setToolTip(tip)
action.setStatusTip(tip)
if slot is not None:
self.connect(action, SIGNAL(signal), slot)
if checkable:
action.setCheckable(True)
return action
def getResults(self, stim, nostim):
if self.ROIs == []:
warn = QMessageBox.warning(self, "No ROI specified", "Warning: No ROI specified")
else:
thread = WorkThread(stim, nostim, self.ROIs)
prog = ProgressWidget(thread)
prog.show()
thread.run()
self.stimval, self.nostimval, self.conditions, self.stimfiles, self.nostimfiles, \
self.stimpx, self.nostimpx, self.stimcenter, self.nostimcenter = thread.getVals()
def onExportActivations(self):
dirname = QFileDialog.getExistingDirectory(parent=self, caption="Choose a directory for export")
dirname = str(dirname)
if dirname != '':
self.onCalculate()
for n in range(len(self.stimfiles)):
for i in range(len(self.stimfiles[n])):
filename = (os.path.basename(self.stimfiles[n][i]))[:-3] + 'csv'
np.savetxt(os.path.join(dirname, filename), self.stimpx[n][i], fmt='%d', delimiter=',')
def onROIfromImg(self):
stim = []
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
stim.append(self.pngs[idx])
self.control = TmsROI(stim, self)
self.MDI.addSubWindow(self.control)
self.control.ROISignal.connect(self.onROIchanged)
self.control.show()
def onROIchanged(self):
self.ROIs = []
for i in range(len(self.control.ROIs)):
self.ROIs.append(self.control.ROIs[i].ROI)
self.ROInames.append('ROI_%d'%(i+1))
self.imageChanged.emit(self.imgfile)
def onSaveSettings(self):
filename = QFileDialog.getSaveFileName(parent=self, caption="Choose a settings filename", filter='*.txt')
f = open(filename, 'w')
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
f.write('%s,True,'%self.pngs[idx])
else:
f.write('%s,False,'%self.pngs[idx])
if item.checkState(3) == Qt.Checked:
f.write('True\n')
else:
f.write('False\n')
f.close()
def onLoadSettings(self):
filename = QFileDialog.getOpenFileName(parent=self, caption="Open a settings file", filter='*.txt')
f = open(filename, 'r').readlines()
basepngs = []
for i in range(len(self.pngs)):
basepngs.append(os.path.basename(self.pngs[i]))
for i in range(len(f)):
l = f[i][:-1].split(',')
png = l[0]
TMS = l[1]
try:
baseline = l[2]
except IndexError:
baseline = 'False'
if TMS == 'True':
try:
idx = basepngs.index(os.path.basename(png))
self.items[idx].setCheckState(2, Qt.Checked)
except ValueError:
pass
if baseline == 'True':
try:
idx = basepngs.index(os.path.basename(png))
self.items[idx].setCheckState(3, Qt.Checked)
except ValueError:
pass
def onLoadROI(self):
files = QFileDialog.getOpenFileNamesAndFilter(parent=self, caption="Choose ROI files", filter='*.npy')
self.ROIs = []
self.ROInames = []
for f in list(files[0]):
ROI = np.load(str(f))
self.ROIs.append(ROI)
self.ROInames.append(f[:-4])
self.imageChanged.emit(self.imgfile)
def onSaveROIs(self):
for roi in self.ROIs:
filename = QFileDialog.getSaveFileNameAndFilter(parent=self, caption="Choose a save file name",
filter="*.npy")
np.save(str(filename[0]), roi)
np.savetxt(str(filename[0][:-3]+'csv'), roi, fmt='%d', delimiter=',')
def onOpen(self):
fd = MultiDirectoryFileDialog()
fd.exec_()
dirs = fd.filesSelected()
self.view.clear()
parent = self.view.invisibleRootItem()
try:
self.pngs = []
self.items = []
for d in dirs:
files = sorted(os.listdir(d))
dname = os.path.basename(d)
condition = dname.split('_')[1]
topitem = QTreeWidgetItem(parent, [dname])
topitem.setText(0, dname)
topitem.setChildIndicatorPolicy(QTreeWidgetItem.ShowIndicator)
topitem.setExpanded(True)
for f in files:
if f[-3:] == 'png':
self.pngs.append(os.path.join(d, f))
item = QTreeWidgetItem(topitem, [f, condition])
item.setText(0, f)
item.setText(1, condition)
item.setCheckState(2, Qt.Unchecked)
item.setCheckState(3, Qt.Unchecked)
self.items.append(item)
self.view.setColumnWidth(0, 200)
self.view.setColumnWidth(1, 75)
self.view.setColumnWidth(2, 50)
self.view.setColumnWidth(3, 50)
except TypeError:
pass
def onExport(self):
filename = QFileDialog.getSaveFileName(parent=self, caption="Choose a save file name")
self.onCalculate()
f = open(filename, 'w')
f.write('filename,condition,stim,center_x,center_y,')
for i in range(0, self.stimval[0].shape[1], 2):
f.write('ROI_%d_pos,ROI_%d_neg,'%((i/2)+1,(i/2)+1))
f.write('\n')
for n in range(len(self.stimval)):
for i in range(self.stimval[n].shape[0]):
f.write('%s,%s,stim,%0.6f,%0.6f,'%(self.stimfiles[n][i], str(self.conditions[n][0]),
self.stimcenter[n][i][0],self.stimcenter[n][i][1]))
for j in range(0, self.stimval[n].shape[1], 2):
f.write('%0.6f,%0.6f,'%(self.stimval[n][i,j], self.stimval[n][i,j+1]))
f.write('\n')
for n in range(len(self.nostimval)):
for i in range(self.nostimval[n].shape[0]):
f.write('%s,%s,no_stim,%0.6f,%0.6f,'%(self.nostimfiles[n][i], str(self.conditions[n][0]),
self.nostimcenter[n][i][0],self.nostimcenter[n][i][1]))
for j in range(0, self.nostimval[n].shape[1], 2):
f.write('%0.6f,%0.6f,'%(self.nostimval[n][i,j], self.nostimval[n][i,j+1]))
f.write('\n')
f.close()
def onSelect(self, item):
try:
idx = self.items.index(item)
self.imgfile = self.pngs[idx]
self.imageChanged.emit(str(self.imgfile))
except ValueError:
pass
def onCalculate(self):
stim = []
nostim = []
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
stim.append([self.pngs[idx], item.text(1)])
if item.checkState(3) == Qt.Checked:
nostim.append([self.pngs[idx], item.text(1)])
self.getResults(stim, nostim)
def onPlot(self):
self.onCalculate()
bp = BarPlot(self)
self.MDI.addSubWindow(bp)
bp.show()
av = ActivationView(control=self)
self.MDI.addSubWindow(av)
av.show()
def setupUi(self, ExifViewer):
ExifViewer.setObjectName("ExifViewer")
ExifViewer.resize(1920, 771)
sizePolicy = QtWidgets.QSizePolicy(
QtWidgets.QSizePolicy.MinimumExpanding,
QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
ExifViewer.sizePolicy().hasHeightForWidth())
ExifViewer.setSizePolicy(sizePolicy)
ExifViewer.setMinimumSize(QtCore.QSize(0, 0))
ExifViewer.setMaximumSize(QtCore.QSize(1920, 1080))
ExifViewer.setStyleSheet("")
ExifViewer.setToolButtonStyle(QtCore.Qt.ToolButtonIconOnly)
self.centralwidget = QtWidgets.QWidget(ExifViewer)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred,
QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.centralwidget.sizePolicy().hasHeightForWidth())
self.centralwidget.setSizePolicy(sizePolicy)
self.centralwidget.setMaximumSize(QtCore.QSize(1920, 1080))
self.centralwidget.setStyleSheet("")
self.centralwidget.setObjectName("centralwidget")
self.gridLayout = QtWidgets.QGridLayout(self.centralwidget)
self.gridLayout.setObjectName("gridLayout")
self.DataExifTab_Layout = QtWidgets.QHBoxLayout()
self.DataExifTab_Layout.setSizeConstraint(
QtWidgets.QLayout.SetNoConstraint)
self.DataExifTab_Layout.setObjectName("DataExifTab_Layout")
self.ExifDataTab = QtWidgets.QTableWidget(self.centralwidget)
self.ExifDataTab.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(
QtWidgets.QSizePolicy.MinimumExpanding,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.ExifDataTab.sizePolicy().hasHeightForWidth())
self.ExifDataTab.setSizePolicy(sizePolicy)
self.ExifDataTab.setMinimumSize(QtCore.QSize(550, 0))
self.ExifDataTab.setMaximumSize(QtCore.QSize(16777215, 16777215))
font = QtGui.QFont()
font.setPointSize(11)
self.ExifDataTab.setFont(font)
self.ExifDataTab.setContextMenuPolicy(QtCore.Qt.NoContextMenu)
self.ExifDataTab.setLayoutDirection(QtCore.Qt.LeftToRight)
self.ExifDataTab.setAutoFillBackground(False)
self.ExifDataTab.setFrameShape(QtWidgets.QFrame.HLine)
self.ExifDataTab.setFrameShadow(QtWidgets.QFrame.Plain)
self.ExifDataTab.setLineWidth(6)
self.ExifDataTab.setMidLineWidth(0)
self.ExifDataTab.setHorizontalScrollBarPolicy(
QtCore.Qt.ScrollBarAsNeeded)
self.ExifDataTab.setSizeAdjustPolicy(
QtWidgets.QAbstractScrollArea.AdjustToContentsOnFirstShow)
self.ExifDataTab.setAutoScroll(True)
self.ExifDataTab.setAutoScrollMargin(5)
self.ExifDataTab.setEditTriggers(
QtWidgets.QAbstractItemView.NoEditTriggers)
self.ExifDataTab.setTabKeyNavigation(False)
self.ExifDataTab.setProperty("showDropIndicator", False)
self.ExifDataTab.setDragDropOverwriteMode(False)
self.ExifDataTab.setAlternatingRowColors(False)
self.ExifDataTab.setSelectionMode(
QtWidgets.QAbstractItemView.ExtendedSelection)
self.ExifDataTab.setSelectionBehavior(
QtWidgets.QAbstractItemView.SelectRows)
self.ExifDataTab.setTextElideMode(QtCore.Qt.ElideRight)
self.ExifDataTab.setHorizontalScrollMode(
QtWidgets.QAbstractItemView.ScrollPerPixel)
self.ExifDataTab.setShowGrid(True)
self.ExifDataTab.setGridStyle(QtCore.Qt.SolidLine)
self.ExifDataTab.setWordWrap(True)
self.ExifDataTab.setCornerButtonEnabled(False)
self.ExifDataTab.setRowCount(0)
self.ExifDataTab.setColumnCount(2)
self.ExifDataTab.setObjectName("ExifDataTab")
self.ExifDataTab.horizontalHeader().setVisible(False)
self.ExifDataTab.horizontalHeader().setDefaultSectionSize(650)
self.ExifDataTab.horizontalHeader().setHighlightSections(False)
self.ExifDataTab.horizontalHeader().setMinimumSectionSize(200)
self.ExifDataTab.verticalHeader().setVisible(False)
self.ExifDataTab.verticalHeader().setCascadingSectionResizes(False)
self.ExifDataTab.verticalHeader().setDefaultSectionSize(30)
self.ExifDataTab.verticalHeader().setMinimumSectionSize(15)
self.DataExifTab_Layout.addWidget(self.ExifDataTab)
self.gridLayout.addLayout(self.DataExifTab_Layout, 0, 1, 1, 1)
self.externalGrid_layout = QtWidgets.QGridLayout()
self.externalGrid_layout.setSizeConstraint(
QtWidgets.QLayout.SetNoConstraint)
self.externalGrid_layout.setVerticalSpacing(0)
self.externalGrid_layout.setObjectName("externalGrid_layout")
self.ListImage_Layout = QtWidgets.QVBoxLayout()
self.ListImage_Layout.setSizeConstraint(QtWidgets.QLayout.SetFixedSize)
self.ListImage_Layout.setObjectName("ListImage_Layout")
self.button_addImages = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_addImages.sizePolicy().hasHeightForWidth())
self.button_addImages.setSizePolicy(sizePolicy)
font = QtGui.QFont()
font.setPointSize(14)
self.button_addImages.setFont(font)
self.button_addImages.setContextMenuPolicy(
QtCore.Qt.ActionsContextMenu)
self.button_addImages.setObjectName("button_addImages")
self.ListImage_Layout.addWidget(self.button_addImages)
spacerItem = QtWidgets.QSpacerItem(10, 10,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Preferred)
self.ListImage_Layout.addItem(spacerItem)
self.verticalLayout_2 = QtWidgets.QVBoxLayout()
self.verticalLayout_2.setSizeConstraint(
QtWidgets.QLayout.SetMinimumSize)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.listWidget = ListPreviewImages(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.listWidget.sizePolicy().hasHeightForWidth())
self.listWidget.setSizePolicy(sizePolicy)
self.listWidget.setMinimumSize(QtCore.QSize(0, 150))
self.listWidget.setAcceptDrops(True)
self.listWidget.setLayoutDirection(QtCore.Qt.LeftToRight)
self.listWidget.setHorizontalScrollBarPolicy(
QtCore.Qt.ScrollBarAsNeeded)
self.listWidget.setSizeAdjustPolicy(
QtWidgets.QAbstractScrollArea.AdjustToContents)
self.listWidget.setEditTriggers(
QtWidgets.QAbstractItemView.DoubleClicked
| QtWidgets.QAbstractItemView.EditKeyPressed
| QtWidgets.QAbstractItemView.SelectedClicked)
self.listWidget.setDragEnabled(True)
self.listWidget.setDragDropMode(QtWidgets.QAbstractItemView.DragDrop)
self.listWidget.setDefaultDropAction(QtCore.Qt.IgnoreAction)
self.listWidget.setSelectionMode(
QtWidgets.QAbstractItemView.MultiSelection)
self.listWidget.setIconSize(QtCore.QSize(150, 150))
self.listWidget.setFlow(QtWidgets.QListView.TopToBottom)
self.listWidget.setProperty("isWrapping", False)
self.listWidget.setResizeMode(QtWidgets.QListView.Adjust)
self.listWidget.setViewMode(QtWidgets.QListView.IconMode)
self.listWidget.setModelColumn(0)
self.listWidget.setUniformItemSizes(False)
self.listWidget.setObjectName("listWidget")
self.verticalLayout_2.addWidget(self.listWidget)
spacerItem1 = QtWidgets.QSpacerItem(10, 10,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Preferred)
self.verticalLayout_2.addItem(spacerItem1)
self.ListImage_Layout.addLayout(self.verticalLayout_2)
self.button_deleteSelectedImages = QtWidgets.QPushButton(
self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_deleteSelectedImages.sizePolicy().hasHeightForWidth())
self.button_deleteSelectedImages.setSizePolicy(sizePolicy)
font = QtGui.QFont()
font.setPointSize(14)
self.button_deleteSelectedImages.setFont(font)
self.button_deleteSelectedImages.setObjectName(
"button_deleteSelectedImages")
self.ListImage_Layout.addWidget(self.button_deleteSelectedImages)
spacerItem2 = QtWidgets.QSpacerItem(10, 10,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Preferred)
self.ListImage_Layout.addItem(spacerItem2)
self.button_deleteAllImages = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_deleteAllImages.sizePolicy().hasHeightForWidth())
self.button_deleteAllImages.setSizePolicy(sizePolicy)
font = QtGui.QFont()
font.setPointSize(14)
self.button_deleteAllImages.setFont(font)
self.button_deleteAllImages.setObjectName("button_deleteAllImages")
self.ListImage_Layout.addWidget(self.button_deleteAllImages)
self.externalGrid_layout.addLayout(self.ListImage_Layout, 0, 0, 1, 1)
self.ViewerImage_Layout = QtWidgets.QVBoxLayout()
self.ViewerImage_Layout.setSizeConstraint(
QtWidgets.QLayout.SetMinAndMaxSize)
self.ViewerImage_Layout.setSpacing(7)
self.ViewerImage_Layout.setObjectName("ViewerImage_Layout")
self.widgetImg = QtWidgets.QWidget(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.widgetImg.sizePolicy().hasHeightForWidth())
self.widgetImg.setSizePolicy(sizePolicy)
self.widgetImg.setMinimumSize(QtCore.QSize(1, 1))
self.widgetImg.setMaximumSize(QtCore.QSize(800, 800))
font = QtGui.QFont()
font.setBold(False)
font.setWeight(50)
self.widgetImg.setFont(font)
self.widgetImg.setStyleSheet("")
self.widgetImg.setObjectName("widgetImg")
self.gridLayout_2 = QtWidgets.QGridLayout(self.widgetImg)
self.gridLayout_2.setSizeConstraint(QtWidgets.QLayout.SetNoConstraint)
self.gridLayout_2.setObjectName("gridLayout_2")
self.image = ImageView(self.widgetImg)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.image.sizePolicy().hasHeightForWidth())
self.image.setSizePolicy(sizePolicy)
self.image.setMaximumSize(QtCore.QSize(800, 800))
font = QtGui.QFont()
font.setPointSize(16)
font.setBold(False)
font.setItalic(False)
font.setUnderline(False)
font.setWeight(50)
font.setStrikeOut(False)
font.setKerning(True)
self.image.setFont(font)
self.image.setAcceptDrops(True)
self.image.setAutoFillBackground(False)
self.image.setStyleSheet("")
self.image.setText("No loaded image")
self.image.setAlignment(QtCore.Qt.AlignCenter)
self.image.setWordWrap(True)
self.image.setObjectName("image")
self.gridLayout_2.addWidget(self.image, 0, 0, 1, 1)
self.ViewerImage_Layout.addWidget(self.widgetImg)
self.BeforeAfterLayout = QtWidgets.QHBoxLayout()
self.BeforeAfterLayout.setSizeConstraint(
QtWidgets.QLayout.SetNoConstraint)
self.BeforeAfterLayout.setObjectName("BeforeAfterLayout")
spacerItem3 = QtWidgets.QSpacerItem(100, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.BeforeAfterLayout.addItem(spacerItem3)
self.button_previous = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_previous.sizePolicy().hasHeightForWidth())
self.button_previous.setSizePolicy(sizePolicy)
palette = QtGui.QPalette()
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Active, QtGui.QPalette.Button, brush)
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Active, QtGui.QPalette.Light, brush)
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Inactive, QtGui.QPalette.Button, brush)
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Inactive, QtGui.QPalette.Light, brush)
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Disabled, QtGui.QPalette.Button, brush)
brush = QtGui.QBrush(QtGui.QColor(238, 238, 236))
brush.setStyle(QtCore.Qt.SolidPattern)
palette.setBrush(QtGui.QPalette.Disabled, QtGui.QPalette.Light, brush)
self.button_previous.setPalette(palette)
self.button_previous.setMouseTracking(True)
self.button_previous.setContextMenuPolicy(QtCore.Qt.CustomContextMenu)
self.button_previous.setText("")
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap("icons/left-arrow.png"),
QtGui.QIcon.Active, QtGui.QIcon.On)
self.button_previous.setIcon(icon)
self.button_previous.setIconSize(QtCore.QSize(40, 40))
self.button_previous.setCheckable(False)
self.button_previous.setAutoExclusive(False)
self.button_previous.setAutoDefault(False)
self.button_previous.setDefault(False)
self.button_previous.setFlat(True)
self.button_previous.setObjectName("button_previous")
self.BeforeAfterLayout.addWidget(self.button_previous, 0,
QtCore.Qt.AlignHCenter)
self.button_rotateLeft = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_rotateLeft.sizePolicy().hasHeightForWidth())
self.button_rotateLeft.setSizePolicy(sizePolicy)
self.button_rotateLeft.setText("")
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap("icons/LeftRotate.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.button_rotateLeft.setIcon(icon1)
self.button_rotateLeft.setIconSize(QtCore.QSize(40, 40))
self.button_rotateLeft.setFlat(True)
self.button_rotateLeft.setObjectName("button_rotateLeft")
self.BeforeAfterLayout.addWidget(self.button_rotateLeft, 0,
QtCore.Qt.AlignHCenter)
self.button_rotateRight = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_rotateRight.sizePolicy().hasHeightForWidth())
self.button_rotateRight.setSizePolicy(sizePolicy)
self.button_rotateRight.setText("")
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap("icons/RightRotate.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.button_rotateRight.setIcon(icon2)
self.button_rotateRight.setIconSize(QtCore.QSize(40, 40))
self.button_rotateRight.setFlat(True)
self.button_rotateRight.setObjectName("button_rotateRight")
self.BeforeAfterLayout.addWidget(self.button_rotateRight, 0,
QtCore.Qt.AlignHCenter)
self.button_next = QtWidgets.QPushButton(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.button_next.sizePolicy().hasHeightForWidth())
self.button_next.setSizePolicy(sizePolicy)
self.button_next.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.button_next.setText("")
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap("icons/right-arrow.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
icon3.addPixmap(
QtGui.QPixmap(
"../github projects/ExifViewer/icons/right-arrow.png"),
QtGui.QIcon.Active, QtGui.QIcon.On)
self.button_next.setIcon(icon3)
self.button_next.setIconSize(QtCore.QSize(40, 40))
self.button_next.setFlat(True)
self.button_next.setObjectName("button_next")
self.BeforeAfterLayout.addWidget(self.button_next, 0,
QtCore.Qt.AlignHCenter)
spacerItem4 = QtWidgets.QSpacerItem(100, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.BeforeAfterLayout.addItem(spacerItem4)
self.ViewerImage_Layout.addLayout(self.BeforeAfterLayout)
self.externalGrid_layout.addLayout(self.ViewerImage_Layout, 0, 1, 1, 1)
self.gridLayout.addLayout(self.externalGrid_layout, 0, 0, 1, 1)
ExifViewer.setCentralWidget(self.centralwidget)
self.retranslateUi(ExifViewer)
self.listWidget.setCurrentRow(-1)
QtCore.QMetaObject.connectSlotsByName(ExifViewer)
def createImgView(self):
self.imgView = ImageView(self)
self.MDI.addSubWindow(self.imgView)
self.imgView.show()
class TMSControl(QMainWindow):
imageChanged = pyqtSignal(str)
def __init__(self, ROIs=None, parent=None):
QMainWindow.__init__(self, parent)
self.setWindowTitle('TMS Parameter Control')
self.imgfile = None
self.ROInames = []
if ROIs != None:
self.ROIs = []
for i in range(len(ROIs)):
self.ROIs.append(ROIs[i].ROI)
self.ROInames.append('ROI_%d' % (i + 1))
else:
self.ROIs = []
self.createMainFrame()
self.createImgView()
self.createMenu()
def createMainFrame(self):
self.mainFrame = QWidget()
self.MDI = QMdiArea()
self.view = QTreeWidget()
self.view.setColumnCount(4)
self.view.setHeaderLabels(['Filename', 'Condition', 'TMS', 'Baseline'])
listLabel = QLabel('Check frames with stimulation:')
self.showBarPlot = QPushButton('Show Results')
self.view.itemDoubleClicked.connect(self.onSelect)
self.showBarPlot.clicked.connect(self.onPlot)
vbox = QVBoxLayout()
vbox.addWidget(listLabel)
vbox.addWidget(self.view)
vbox.addWidget(self.showBarPlot)
hbox = QHBoxLayout()
hbox.addLayout(vbox)
hbox.addWidget(self.MDI)
self.mainFrame.setLayout(hbox)
self.setCentralWidget(self.mainFrame)
def createImgView(self):
self.imgView = ImageView(self)
self.MDI.addSubWindow(self.imgView)
self.imgView.show()
def createMenu(self):
'''
Creates the file menu
'''
self.file_menu = self.menuBar().addMenu("&File")
load_action = self.create_action("&Open Images",
shortcut="Ctrl+O",
slot=self.onOpen,
tip="Open a set of image directories")
save_ROI_action = self.create_action(
"&Save ROIs",
slot=self.onSaveROIs,
shortcut="Ctrl+R",
tip="Save each ROI to a .npy file")
load_ROI_action = self.create_action("&Load ROI",
shortcut="Ctrl+L",
slot=self.onLoadROI,
tip="Load ROIs from files")
export_action = self.create_action("&Export Results",
slot=self.onExport,
shortcut="Ctrl+S",
tip="Export results to file")
colormap_action = self.create_action(
"Export &Activations",
slot=self.onExportActivations,
shortcut="Ctrl+C",
tip="Export activation images to csv files")
quit_action = self.create_action("&Quit",
slot=self.close,
shortcut="Ctrl+Q",
tip="Close the application")
roi_from_img_action = self.create_action(
"&ROI from images",
slot=self.onROIfromImg,
tip="Use TMS images to define an ROI")
self.settings_menu = self.menuBar().addMenu("&Settings")
save_settings_action = self.create_action("Save Se&ttings",
slot=self.onSaveSettings,
tip="Save check settings")
load_settings_action = self.create_action("&Load Settings",
slot=self.onLoadSettings,
tip="Load a settings file")
self.add_actions(self.file_menu,
(load_action, save_ROI_action, load_ROI_action,
roi_from_img_action, None, export_action,
colormap_action, None, quit_action))
self.add_actions(self.settings_menu,
(save_settings_action, load_settings_action))
def add_actions(self, target, actions):
'''
Adds the actions to the file menu
'''
for action in actions:
if action is None:
target.addSeparator()
else:
target.addAction(action)
def create_action(self,
text,
slot=None,
shortcut=None,
icon=None,
tip=None,
checkable=False,
signal="triggered()"):
'''
Creates actions for the file menu
'''
action = QAction(text, self)
if icon is not None:
action.setIcon(QIcon(":/%s.png" % icon))
if shortcut is not None:
action.setShortcut(shortcut)
if tip is not None:
action.setToolTip(tip)
action.setStatusTip(tip)
if slot is not None:
self.connect(action, SIGNAL(signal), slot)
if checkable:
action.setCheckable(True)
return action
def getResults(self, stim, nostim):
if self.ROIs == []:
warn = QMessageBox.warning(self, "No ROI specified",
"Warning: No ROI specified")
else:
thread = WorkThread(stim, nostim, self.ROIs)
prog = ProgressWidget(thread)
prog.show()
thread.run()
self.stimval, self.nostimval, self.conditions, self.stimfiles, self.nostimfiles, \
self.stimpx, self.nostimpx, self.stimcenter, self.nostimcenter = thread.getVals()
def onExportActivations(self):
dirname = QFileDialog.getExistingDirectory(
parent=self, caption="Choose a directory for export")
dirname = str(dirname)
if dirname != '':
self.onCalculate()
for n in range(len(self.stimfiles)):
for i in range(len(self.stimfiles[n])):
filename = (os.path.basename(
self.stimfiles[n][i]))[:-3] + 'csv'
np.savetxt(os.path.join(dirname, filename),
self.stimpx[n][i],
fmt='%d',
delimiter=',')
def onROIfromImg(self):
stim = []
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
stim.append(self.pngs[idx])
self.control = TmsROI(stim, self)
self.MDI.addSubWindow(self.control)
self.control.ROISignal.connect(self.onROIchanged)
self.control.show()
def onROIchanged(self):
self.ROIs = []
for i in range(len(self.control.ROIs)):
self.ROIs.append(self.control.ROIs[i].ROI)
self.ROInames.append('ROI_%d' % (i + 1))
self.imageChanged.emit(self.imgfile)
def onSaveSettings(self):
filename = QFileDialog.getSaveFileName(
parent=self, caption="Choose a settings filename", filter='*.txt')
f = open(filename, 'w')
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
f.write('%s,True,' % self.pngs[idx])
else:
f.write('%s,False,' % self.pngs[idx])
if item.checkState(3) == Qt.Checked:
f.write('True\n')
else:
f.write('False\n')
f.close()
def onLoadSettings(self):
filename = QFileDialog.getOpenFileName(parent=self,
caption="Open a settings file",
filter='*.txt')
f = open(filename, 'r').readlines()
basepngs = []
for i in range(len(self.pngs)):
basepngs.append(os.path.basename(self.pngs[i]))
for i in range(len(f)):
l = f[i][:-1].split(',')
png = l[0]
TMS = l[1]
try:
baseline = l[2]
except IndexError:
baseline = 'False'
if TMS == 'True':
try:
idx = basepngs.index(os.path.basename(png))
self.items[idx].setCheckState(2, Qt.Checked)
except ValueError:
pass
if baseline == 'True':
try:
idx = basepngs.index(os.path.basename(png))
self.items[idx].setCheckState(3, Qt.Checked)
except ValueError:
pass
def onLoadROI(self):
files = QFileDialog.getOpenFileNamesAndFilter(
parent=self, caption="Choose ROI files", filter='*.npy')
self.ROIs = []
self.ROInames = []
for f in list(files[0]):
ROI = np.load(str(f))
self.ROIs.append(ROI)
self.ROInames.append(f[:-4])
self.imageChanged.emit(self.imgfile)
def onSaveROIs(self):
for roi in self.ROIs:
filename = QFileDialog.getSaveFileNameAndFilter(
parent=self, caption="Choose a save file name", filter="*.npy")
np.save(str(filename[0]), roi)
np.savetxt(str(filename[0][:-3] + 'csv'),
roi,
fmt='%d',
delimiter=',')
def onOpen(self):
fd = MultiDirectoryFileDialog()
fd.exec_()
dirs = fd.filesSelected()
self.view.clear()
parent = self.view.invisibleRootItem()
try:
self.pngs = []
self.items = []
for d in dirs:
files = sorted(os.listdir(d))
dname = os.path.basename(d)
condition = dname.split('_')[1]
topitem = QTreeWidgetItem(parent, [dname])
topitem.setText(0, dname)
topitem.setChildIndicatorPolicy(QTreeWidgetItem.ShowIndicator)
topitem.setExpanded(True)
for f in files:
if f[-3:] == 'png':
self.pngs.append(os.path.join(d, f))
item = QTreeWidgetItem(topitem, [f, condition])
item.setText(0, f)
item.setText(1, condition)
item.setCheckState(2, Qt.Unchecked)
item.setCheckState(3, Qt.Unchecked)
self.items.append(item)
self.view.setColumnWidth(0, 200)
self.view.setColumnWidth(1, 75)
self.view.setColumnWidth(2, 50)
self.view.setColumnWidth(3, 50)
except TypeError:
pass
def onExport(self):
filename = QFileDialog.getSaveFileName(
parent=self, caption="Choose a save file name")
self.onCalculate()
f = open(filename, 'w')
f.write('filename,condition,stim,center_x,center_y,')
for i in range(0, self.stimval[0].shape[1], 2):
f.write('ROI_%d_pos,ROI_%d_neg,' % ((i / 2) + 1, (i / 2) + 1))
f.write('\n')
for n in range(len(self.stimval)):
for i in range(self.stimval[n].shape[0]):
f.write('%s,%s,stim,%0.6f,%0.6f,' %
(self.stimfiles[n][i], str(self.conditions[n][0]),
self.stimcenter[n][i][0], self.stimcenter[n][i][1]))
for j in range(0, self.stimval[n].shape[1], 2):
f.write('%0.6f,%0.6f,' %
(self.stimval[n][i, j], self.stimval[n][i, j + 1]))
f.write('\n')
for n in range(len(self.nostimval)):
for i in range(self.nostimval[n].shape[0]):
f.write(
'%s,%s,no_stim,%0.6f,%0.6f,' %
(self.nostimfiles[n][i], str(self.conditions[n][0]),
self.nostimcenter[n][i][0], self.nostimcenter[n][i][1]))
for j in range(0, self.nostimval[n].shape[1], 2):
f.write(
'%0.6f,%0.6f,' %
(self.nostimval[n][i, j], self.nostimval[n][i, j + 1]))
f.write('\n')
f.close()
def onSelect(self, item):
try:
idx = self.items.index(item)
self.imgfile = self.pngs[idx]
self.imageChanged.emit(str(self.imgfile))
except ValueError:
pass
def onCalculate(self):
stim = []
nostim = []
for item in self.items:
idx = self.items.index(item)
if item.checkState(2) == Qt.Checked:
stim.append([self.pngs[idx], item.text(1)])
if item.checkState(3) == Qt.Checked:
nostim.append([self.pngs[idx], item.text(1)])
self.getResults(stim, nostim)
def onPlot(self):
self.onCalculate()
bp = BarPlot(self)
self.MDI.addSubWindow(bp)
bp.show()
av = ActivationView(control=self)
self.MDI.addSubWindow(av)
av.show()
