import pathlib
from infomap import Infomap
im = Infomap(silent=True)
name = "ninetriangles"
filename = f"../networks/{name}.net"
# You can read a network with the method read_file,
# which by default will accumulate to existing network data
im.read_file(filename, accumulate=False)
im.run(num_trials=5)
print(
f"Found {im.max_depth} levels with {im.num_leaf_modules} leaf modules in {im.num_top_modules} top modules and codelength: {im.codelength:.8f} bits"
)
print(f"All codelengths: {im.codelengths}")
print("Tree:\n# path node_id module_id flow")
for node in im.nodes:
print(f"{node.path} {node.node_id} {node.module_id} {node.flow:.8f}")
for module_level in range(1, im.max_depth):
print(
f"Modules at level {module_level}: {tuple(im.get_modules(module_level).values())}"
)
print("\nModules at all levels:")
for node_id, modules in im.get_multilevel_modules().items():
from infomap import Infomap
im = Infomap(silent=True)
im.read_file("../networks/states.net")
im.run()
print("source target weight")
for source, target, weight in im.get_links(): # or im.links:
print(source, target, weight)
print("source target flow")
for source, target, flow in im.get_links(data="flow"): # or im.flow_links
print(source, target, f"{flow:.4f}")