def test_loadFile_exampleValues(self):
# check the length
pdDF = io.loadFile(
'examples/valid/' +
'example_Metatranscriptome_9_HOW4_[LakWasMeta9_HOW4_2]/IMG_Data/' +
'61177.assembled.faa.phylodist',
verbose=True
)
self.assertEquals(len(pdDF.index), 10001)
# spot check row 98's locus_tag
self.assertEquals(pdDF.at[97, 'locus_tag'], 'Ga0066495_1324111')
def test_loadFile_exampleValues(self):
# check the length
pdDF = io.loadFile(
'examples/valid/' +
'example_Metatranscriptome_9_HOW4_[LakWasMeta9_HOW4_2]/IMG_Data/' +
'61177.assembled.faa.phylodist',
verbose=True
)
self.assertEquals(len(pdDF.index), 10001)
# spot check row 98's locus_tag
self.assertEquals(pdDF.at[97, 'locus_tag'], 'Ga0066495_1324111')
def test_loadFile_filenameType(self):
with self.assertRaises(TypeError):
io.loadFile(42)
def test_loadFile_incorrectTaxFieldCount(self):
with self.assertRaises(ValueError):
io.loadFile('examples/invalid/badTaxRecordLength.phylodist')
def test_loadFile_directoryNotFile(self):
with self.assertRaises(IOError):
io.loadFile('examples')
def test_loadFile_nonExistentFile(self):
with self.assertRaises(IOError):
io.loadFile('file_does_not_exist')
def test_loadFile_verboseType(self):
with self.assertRaises(TypeError):
io.loadFile('filename', 42)
fpsClock = pygame.time.Clock()
pygame.init()
screen = pygame.display.set_mode((800, 600))
pygame.display.set_caption('tsar-bomba - Model Maker')
pygame.mouse.set_visible(1)
running = True
playAnim = False
speed = 0
colors = colset.colorList()
currentColor = (255,0,0)
colorHistory = []
frameIndex = 0
speedTicks = [1,3,6,10,30]
filename, model = io.loadFile(sys.argv)
speed = model.speed
print "Using: %s" % filename
gui = GUI(screen) # all static parts of the GUI is drawn
gui.drawColor(currentColor)
gui.drawFrame(model.frame(frameIndex).grid)
while running:
for event in pygame.event.get():
if event.type == QUIT:
pygame.quit()
sys.exit()
if event.type == MOUSEBUTTONDOWN:
def test_loadFile_nonExistentFile(self):
with self.assertRaises(IOError):
io.loadFile('file_does_not_exist')
def test_loadFile_verboseType(self):
with self.assertRaises(TypeError):
io.loadFile('filename', 42)
def test_loadFile_filenameType(self):
with self.assertRaises(TypeError):
io.loadFile(42)
def test_loadFile_incorrectTaxFieldCount(self):
with self.assertRaises(ValueError):
io.loadFile('examples/invalid/badTaxRecordLength.phylodist')
def test_loadFile_directoryNotFile(self):
with self.assertRaises(IOError):
io.loadFile('examples')