Beispiel #1
0
from ipi.inputs import barostats, cell, simulation, system, \
    ensembles, thermostats, forcefields, forces, atoms, beads, \
    prng, initializer, normalmodes, outputs, motion, smotion

time.sleep(1)
__all__ = ['help', 'objects']

objects = {
    'barostats': barostats.InputBaro(),
    'cell': cell.InputCell(),
    'simulation': simulation.InputSimulation(),
    'smotion': smotion.smotion.InputSmotion(),
    'remd': smotion.remd.InputReplicaExchange(),
    'meta': smotion.metad.InputMetaDyn(),
    'system': system.InputSystem(),
    'ensembles': ensembles.InputEnsemble(),
    'motion': motion.motion.InputMotion(),
    'dynamics': motion.dynamics.InputDynamics(),
    'alchemy': motion.alchemy.InputAlchemy(),
    'instanton': motion.instanton.InputInst(),
    'phonons': motion.phonons.InputDynMatrix(),
    'geop': motion.geop.InputGeop(),
    'neb': motion.neb.InputNEB(),
    'thermostats': thermostats.InputThermo(),
    'forcefield': forcefields.InputForceField(),
    'ffsocket': forcefields.InputFFSocket(),
    'fflj': forcefields.InputFFLennardJones(),
    'ffdebye': forcefields.InputFFDebye(),
    'ffplumed': forcefields.InputFFPlumed(),
    'ffyaff': forcefields.InputFFYaff(),
    'forcecomponent': forces.InputForceComponent(),
Beispiel #2
0
src_dir = "../"
sys.path.append(src_dir)


time.sleep(1)
__all__ = ["help", "objects"]

objects = {
    "barostats": barostats.InputBaro(),
    "cell": cell.InputCell(),
    "simulation": simulation.InputSimulation(),
    "smotion": smotion.smotion.InputSmotion(),
    "remd": smotion.remd.InputReplicaExchange(),
    "meta": smotion.metad.InputMetaDyn(),
    "system": system.InputSystem(),
    "ensembles": ensembles.InputEnsemble(),
    "motion": motion.motion.InputMotion(),
    "dynamics": motion.dynamics.InputDynamics(),
    "t_ramp": motion.ramp.InputTemperatureRamp(),
    "p_ramp": motion.ramp.InputPressureRamp(),
    "alchemy": motion.alchemy.InputAlchemy(),
    "planetary": motion.planetary.InputPlanetary(),
    "atomswap": motion.atomswap.InputAtomSwap(),
    "instanton": motion.instanton.InputInst(),
    "phonons": motion.phonons.InputDynMatrix(),
    "geop": motion.geop.InputGeop(),
    "neb": motion.neb.InputNEB(),
    "thermostats": thermostats.InputThermo(),
    "forcefield": forcefields.InputForceField(),
    "ffsocket": forcefields.InputFFSocket(),
    "fflj": forcefields.InputFFLennardJones(),