def test_protocol_addition_of_partials(self):
p1 = Protocol()
p1.add_instrument('A', 'p20')
p1.add_container('A1', 'microplate.96')
p1.transfer('A1:A1', 'A1:A2', ul=10)
p2 = Protocol.partial()
p2.add_container('A2', 'microplate.96')
p2.transfer('A1:A1', 'A1:A3', ul=20)
p2.transfer('A2:A1', 'A2:A4', ul=15)
p3 = Protocol.partial()
p3.add_container('A3', 'microplate.96')
p3.transfer('A1:A1', 'A1:A3', ul=20)
p3.transfer('A1:A1', 'A3:A4', ul=15)
p4 = Protocol()
p4.add_instrument('A', 'p20')
p4.add_container('A1', 'microplate.96')
p4.add_container('A2', 'microplate.96')
p4.add_container('A3', 'microplate.96')
p4.transfer('A1:A1', 'A1:A2', ul=10)
p4.transfer('A1:A1', 'A1:A3', ul=20)
p4.transfer('A2:A1', 'A2:A4', ul=15)
p4.transfer('A1:A1', 'A1:A3', ul=20)
p4.transfer('A1:A1', 'A3:A4', ul=15)
self.assertEqual(p4, p1 + p2 + p3)
def test_valid_partial_protocol_export(self):
p = Protocol.partial()
p.add_instrument('A', 'p10')
p.add_container("A1", "microplate.96")
p.transfer('A1:A1', 'A1:A3', ul=1)
# This should export because there are no Partial problems.
p.export(JSONFormatter)
def test_valid_partial_protocol_run(self):
p = Protocol.partial()
p.add_instrument('A', 'p10')
p.add_container("A1", "microplate.96")
p.transfer('A1:A1', 'A1:A3', ul=1)
# This should run because there are no Partial problems.
p.run_all()
def test_protocol_added_to_partial(self):
p1 = Protocol()
p1.add_instrument('A', 'p20')
p1.add_container('A1', 'microplate.96')
p1.transfer('A1:A1', 'A1:A2', ul=10)
p2 = Protocol.partial()
p2.add_container('A2', 'microplate.96')
p2.transfer('A1:A1', 'A1:A3', ul=20)
p2.transfer('A2:A1', 'A2:A4', ul=15)
with self.assertRaises(TypeError):
p2 + p1
def test_partial_protocol_export(self):
p = Protocol.partial()
p.transfer('A1:A1', 'A1:A3', ul=1)
with self.assertRaises(x.PartialProtocolException):
# This shouldn't export because it's not valid.
p.export(JSONFormatter)
def test_partial_protocol_run(self):
p = Protocol.partial()
p.transfer('A1:A1', 'A1:A3', ul=1)
with self.assertRaises(x.PartialProtocolException):
# This shouldn't run because it's not valid.
p.run_all()
def test_partial_protocol(self):
p = Protocol.partial()
p.transfer('A1:A1', 'A1:A3', ul=1)