def deleteModelHierarchy(model_filename): doc = SbmlDocument() doc.readSbmlFromFile(model_filename) path = dirname(model_filename) if doc.useCompPackage: for dependency in doc.getExternalDocumentDependencies(): deleteModelHierarchy(join(path, dependency)) remove(model_filename)
def deleteModelHierarchy(model_filename):
doc = SbmlDocument()
doc.readSbmlFromFile(model_filename)
path = dirname(model_filename)
if doc.useCompPackage:
for dependency in doc.getExternalDocumentDependencies():
deleteModelHierarchy(join(path, dependency))
remove(model_filename)
def getModelHierarchy(model_filename): doc = SbmlDocument() doc.readSbmlFromFile(model_filename) path = dirname(model_filename) deps = [] if doc.useCompPackage: for dependency in doc.getExternalDocumentDependencies(): deps.append(dependency) deps += getModelHierarchy(join(path, dependency)) return deps
def getModelHierarchy(model_filename):
doc = SbmlDocument()
doc.readSbmlFromFile(model_filename)
path = dirname(model_filename)
deps = []
if doc.useCompPackage:
for dependency in doc.getExternalDocumentDependencies():
deps.append(dependency)
deps += getModelHierarchy(join(path, dependency))
return deps
def copyModelHierarchy(model_filename):
doc = SbmlDocument()
doc.readSbmlFromFile(model_filename)
path = dirname(model_filename)
master_filename = new_model_filename()
if doc.useCompPackage:
deps = doc.getExternalDocumentDependencies()
new_deps = {}
for dependency in deps:
new_deps.update({dependency: copyModelHierarchy(join(path, dependency))})
doc.renameExternalDocumentDependencies(new_deps)
doc.writeSbmlToFile(join(path, master_filename))
return master_filename
def copyModelHierarchy(model_filename):
doc = SbmlDocument()
doc.readSbmlFromFile(model_filename)
path = dirname(model_filename)
master_filename = new_model_filename()
if doc.useCompPackage:
deps = doc.getExternalDocumentDependencies()
new_deps = {}
for dependency in deps:
new_deps.update(
{dependency: copyModelHierarchy(join(path, dependency))})
doc.renameExternalDocumentDependencies(new_deps)
doc.writeSbmlToFile(join(path, master_filename))
return master_filename
