def single_fitting(are_four_col):
"""
Gets parameters from window, executes fitting for the chosen file (four or two columns depending on argument's value)
displays fitting curves and data points from file
:param are_four_col:
:return:
"""
# LOADING DATA AND AGGREGATION
save_btn.place_forget()
data = None
if are_four_col:
data = load_files.load_mapping_file(file_name.get())
else:
data = load_files.load_two_column_file(file_name.get())
omega = data[2]
intensity = data[3]
is_bg_active = active_bg.get()
result = ns.find_grain_diameter(
omega,
intensity,
float(min_size.get()),
float(max_size.get()) + float(size_step.get()),
float(size_step.get()),
True,
read_params(),
is_bg_active,
)
global f
f.clf()
f = result[4]
f.suptitle(file_name.get().split("/")[-1])
global canvas
canvas = FigureCanvasTkAgg(f, master=root)
canvas.get_tk_widget().place(x=0, y=30)
canvas.get_tk_widget().configure(border=0, width=650, height=450)
map_rbtn_one.place_forget()
map_rbtn_two.place_forget()
map_rbtn_three.place_forget()
map_rbtn_four.place_forget()
map_param_rbtn_one.place_forget()
map_param_rbtn_two.place_forget()
map_param_rbtn_three.place_forget()
map_param_rbtn_four.place_forget()
save_btn.place(x=545, y=1)
def single_fitting(are_four_col):
"""
Gets parameters from window, executes fitting for the chosen file (four or two columns depending on argument's value)
displays fitting curves and data points from file
:param are_four_col:
:return:
"""
# LOADING DATA AND AGGREGATION
save_btn.place_forget()
data = None
if are_four_col:
data = load_files.load_mapping_file(file_name.get())
else:
data = load_files.load_two_column_file(file_name.get())
omega = data[2]
intensity = data[3]
is_bg_active = active_bg.get()
result = ns.find_grain_diameter(
omega, intensity, float(min_size.get()),
float(max_size.get()) + float(size_step.get()), float(size_step.get()),
True, read_params(), is_bg_active)
global f
f.clf()
f = result[4]
f.suptitle(file_name.get().split('/')[-1])
global canvas
canvas = FigureCanvasTkAgg(f, master=root)
canvas.get_tk_widget().place(x=0, y=30)
canvas.get_tk_widget().configure(border=0, width=650, height=450)
map_rbtn_one.place_forget()
map_rbtn_two.place_forget()
map_rbtn_three.place_forget()
map_rbtn_four.place_forget()
map_param_rbtn_one.place_forget()
map_param_rbtn_two.place_forget()
map_param_rbtn_three.place_forget()
map_param_rbtn_four.place_forget()
save_btn.place(x=545, y=1)
def map_maker():
# LOADING DATA AND AGGREGATION
save_btn.place_forget()
data = load_files.load_mapping_file(file_name.get())
aggregated_data = agg.agg_data(
data, float(min_size.get()),
float(max_size.get()) + float(size_step.get()), float(size_step.get()),
read_params(), number_of_peaks_to_fit)
global datasets_for_map
del datasets_for_map[:]
# for arg in datasets_for_map:
# datasets_for_map.remove(arg)
for data_set in aggregated_data:
data_array = np.array(data_set)
min_value = min(map(min, data_set))
max_value = max(map(max, data_set))
if min_value == max_value:
min_value -= 0.1 * min_value
max_value += 0.1 * max_value
datasets_for_map.append([data_array, min_value, max_value])
global selected_dataset
selected_dataset = 0
# MAP MAKING
global selected_style
selected_style = 0
global map_styles
global dataset_titles
global f
f.clf()
a = f.add_subplot(1, 1, 1)
f.suptitle(dataset_titles[selected_dataset])
b = a.pcolor(datasets_for_map[selected_dataset][0],
cmap=map_styles[selected_style],
vmin=datasets_for_map[selected_dataset][1],
vmax=datasets_for_map[selected_dataset][2])
f.colorbar(b)
a.set_yticks(
np.arange(0, datasets_for_map[selected_dataset][0].shape[0], 5))
a.set_xticks(
np.arange(0, datasets_for_map[selected_dataset][0].shape[1], 5))
a.set_xticklabels(
np.arange(0, 2 * datasets_for_map[selected_dataset][0].shape[1], 10))
a.set_yticklabels(
np.arange(0, 2 * datasets_for_map[selected_dataset][0].shape[0], 10))
a.set_xlabel("x [" + u"\u00B5" + "m]")
a.set_ylabel("y [" + u"\u00B5" + "m]")
global canvas
canvas = FigureCanvasTkAgg(f, master=root)
canvas.get_tk_widget().place(x=0, y=30)
canvas.get_tk_widget().config(border=0)
notification_label.config(text="")
map_rbtn_one.place(x=10, y=484)
map_rbtn_two.place(x=110, y=484)
map_rbtn_three.place(x=210, y=484)
map_rbtn_four.place(x=310, y=484)
map_param_rbtn_one.place(x=10, y=5)
map_param_rbtn_two.place(x=110, y=5)
map_param_rbtn_three.place(x=210, y=5)
map_param_rbtn_four.place(x=310, y=5)
global first_mapping
first_mapping = 0
save_btn.place(x=545, y=1)
def map_maker():
# LOADING DATA AND AGGREGATION
save_btn.place_forget()
data = load_files.load_mapping_file(file_name.get())
aggregated_data = agg.agg_data(
data,
float(min_size.get()),
float(max_size.get()) + float(size_step.get()),
float(size_step.get()),
read_params(),
number_of_peaks_to_fit,
)
global datasets_for_map
del datasets_for_map[:]
# for arg in datasets_for_map:
# datasets_for_map.remove(arg)
for data_set in aggregated_data:
data_array = np.array(data_set)
min_value = min(map(min, data_set))
max_value = max(map(max, data_set))
if min_value == max_value:
min_value -= 0.1 * min_value
max_value += 0.1 * max_value
datasets_for_map.append([data_array, min_value, max_value])
global selected_dataset
selected_dataset = 0
# MAP MAKING
global selected_style
selected_style = 0
global map_styles
global dataset_titles
global f
f.clf()
a = f.add_subplot(1, 1, 1)
f.suptitle(dataset_titles[selected_dataset])
b = a.pcolor(
datasets_for_map[selected_dataset][0],
cmap=map_styles[selected_style],
vmin=datasets_for_map[selected_dataset][1],
vmax=datasets_for_map[selected_dataset][2],
)
f.colorbar(b)
a.set_yticks(np.arange(0, datasets_for_map[selected_dataset][0].shape[0], 5))
a.set_xticks(np.arange(0, datasets_for_map[selected_dataset][0].shape[1], 5))
a.set_xticklabels(np.arange(0, 2 * datasets_for_map[selected_dataset][0].shape[1], 10))
a.set_yticklabels(np.arange(0, 2 * datasets_for_map[selected_dataset][0].shape[0], 10))
a.set_xlabel("x [" + u"\u00B5" + "m]")
a.set_ylabel("y [" + u"\u00B5" + "m]")
global canvas
canvas = FigureCanvasTkAgg(f, master=root)
canvas.get_tk_widget().place(x=0, y=30)
canvas.get_tk_widget().config(border=0)
notification_label.config(text="")
map_rbtn_one.place(x=10, y=484)
map_rbtn_two.place(x=110, y=484)
map_rbtn_three.place(x=210, y=484)
map_rbtn_four.place(x=310, y=484)
map_param_rbtn_one.place(x=10, y=5)
map_param_rbtn_two.place(x=110, y=5)
map_param_rbtn_three.place(x=210, y=5)
map_param_rbtn_four.place(x=310, y=5)
global first_mapping
first_mapping = 0
save_btn.place(x=545, y=1)
