Beispiel #1
0
def feedforward_opt(app, X, W_in_1, W_1_2, W_2_out, B_1, B_2, B_out, num_gpus):
    # Section 1
    # LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)
    B_1_ga = GraphArray.from_ba(B_1, cluster_state)
    B_2_ga = GraphArray.from_ba(B_2, cluster_state)
    B_out_ga = GraphArray.from_ba(B_out, cluster_state)
    initend = time.time()

    # Section 2
    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga, B_1_ga)
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)

    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga, B_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)

    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga, B_out_ga)
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)
    endtime = time.time()

    y_predict_ga_ba: BlockArray = opt.compute_graph_array(app, y_predict_ga)
    y_predict_ga_ba.touch()

    return initend, endtime
Beispiel #2
0
def one_step_fit_opt(app, X, y, theta, num_gpus):
    # Section 1
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    y_ga = GraphArray.from_ba(y, cluster_state)
    theta_ga = GraphArray.from_ba(theta, cluster_state)
    initend = time.time()

    # Section 2
    mu_ga: GraphArray = opt.forward(app, X_ga, theta_ga, one_ga)
    grad_ga: GraphArray = opt.grad(app, X_ga, y_ga, mu_ga)
    hess_ga: GraphArray = opt.hessian(app, X_ga, one_ga, mu_ga)
    endtime = time.time()

    grad_ga_ba: BlockArray = opt.compute_graph_array(app, grad_ga)
    hess_ga_ba: BlockArray = opt.compute_graph_array(app, hess_ga)
    theta: BlockArray = opt.update_theta(app, grad_ga_ba, hess_ga_ba, theta)

    theta.touch()

    return initend, endtime
def matmul_opt(app, W, D, num_gpus):
    # Section 1
    cluster_state = ClusterState((num_gpus, 1), app.system)
    W_ga: GraphArray = GraphArray.from_ba(W, cluster_state)
    D_ga: GraphArray = GraphArray.from_ba(D, cluster_state)
    initend = time.time()

    # Section 2
    Z_ga: GraphArray = opt.collapse_graph_array(app, W_ga @ D_ga)
    endtime = time.time()

    Z: BlockArray = opt.compute_graph_array(app, Z_ga)
    Z.touch()
    del Z
    return initend, endtime
Beispiel #4
0
def feedforward_opt(app, X, W_in_1, W_1_2, W_2_out, num_gpus):
    # Section 1
    # LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)

    # Distribute Weights
    distribute_weights(W_in_1, cluster_state)
    distribute_weights(W_1_2, cluster_state)
    distribute_weights(W_2_out, cluster_state)
    # for node_id in cluster_state.get_cluster_node_ids():
    #     for grid_entry in W_in_1.grid.get_entry_iterator():
    #         from nums.core.array.base import Block
    #         block: Block = W_in_1.blocks[grid_entry]
    #         if node_id not in cluster_state.get_block_node_ids(block.id):
    #             dst_actor = node_id[0]
    #             app.system.distribute_to(block.oid, dst_actor)  # copy for compute
    #             cluster_state.commit_copy_block(block.id, node_id)  # copy for optimizer

    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)

    initend = time.time()
    # Section 2
    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga)
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)

    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)

    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga)
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)
    endtime = time.time()

    y_predict_ga_ba: BlockArray = opt.compute_graph_array(app, y_predict_ga)
    y_predict_ga_ba.touch()

    return y_predict_ga_ba
def feedforward_opt(app, X, W_in_1, W_1_2, W_2_out, num_gpus):
    # Section 1
    # LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    # print(f"X_ga block_shape {X_ga.block_shape}")
    # y_ga = GraphArray.from_ba(y, cluster_state)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)

    # Distribute Weights
    distribute_weights(app.one, cluster_state)
    distribute_weights(X, cluster_state)
    # distribute_weights(y, cluster_state)
    initend = time.time()

    # Section 2
    # print(f"forward Z_1_ga")
    # print(f"W_in_1_ga block_shape {W_in_1_ga.block_shape}")
    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga)  # --> 0/1
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)  # --> 0/1
    # distribute_weights(S_1_ga, cluster_state)

    # print(f"forward Z_2_ga")
    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)

    # print("forward Z_out_ga")
    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga)  # --> 0/1
    # print("forward y_predict_ga")
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)  # --> 0/1
    endtime = time.time()

    y_predict_ga_ba: BlockArray = opt.compute_graph_array(app, y_predict_ga)
    y_predict_ga_ba.touch()

    return initend, endtime
def one_step_fit_opt(app,
                     X,
                     y,
                     W_in_1,
                     W_1_2,
                     W_2_out,
                     num_gpus,
                     verbose=False):
    # --forward propagation--
    LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    y_ga = GraphArray.from_ba(y, cluster_state)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)

    if verbose:
        print("forward Z_1_ga")
    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga)
    if verbose:
        print("forward S_1_ga")
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)
    if verbose:
        print("forward F_1_ga")
    F_1_ga: GraphArray = opt.sigmoid_deriv(app, Z_1_ga, one_ga)
    if verbose:
        print("forward Z_2_ga")
    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)
    F_2_ga: GraphArray = opt.sigmoid_deriv(app, Z_2_ga, one_ga)
    if verbose:
        print("forward Z_out_ga")
    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga)
    if verbose:
        print("forward y_predict_ga")
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)
    if verbose:
        print("forward F_out_ga")
    F_out_ga: GraphArray = opt.sigmoid_deriv(app, Z_out_ga, one_ga)
    initend = time.time()

    # --back propagation--
    if verbose:
        print("collapse D_out_ga")
    D_out_ga = opt.collapse_graph_array(app,
                                        F_out_ga.T * (y_predict_ga - y_ga).T)
    if verbose:
        print("collapse D_2_ga")
    D_2_ga = opt.collapse_graph_array(app, F_2_ga.T * (W_2_out_ga @ D_out_ga))
    if verbose:
        print("collapse D_1_ga")
    D_1_ga = opt.collapse_graph_array(app, F_1_ga.T * (W_1_2_ga @ D_2_ga))
    distribute_graph_array(D_1_ga, cluster_state)
    if verbose:
        print("collapse_graph_array dW_in_1_ga")
    dW_in_1_ga = opt.collapse_graph_array(app, (D_1_ga @ X_ga).T)
    if verbose:
        print("collapse_graph_array dW_1_2_ga")
    dW_1_2_ga = opt.collapse_graph_array(app, (D_2_ga @ S_1_ga).T)
    if verbose:
        print("collapse_graph_array dW_2_out_ga")
    dW_2_out_ga = opt.collapse_graph_array(app, (D_out_ga @ S_2_ga).T)

    endtime = time.time()

    dW_in_1_ga_ba: BlockArray = opt.compute_graph_array(app, dW_in_1_ga)
    dW_1_2_ga_ba: BlockArray = opt.compute_graph_array(app, dW_1_2_ga)
    dW_2_out_ga_ba: BlockArray = opt.compute_graph_array(app, dW_2_out_ga)

    if verbose:
        print("update W_in_1")
    W_in_1 = W_in_1 - LR * dW_in_1_ga_ba
    if verbose:
        print("update W_1_2")
    W_1_2 = W_1_2 - LR * dW_1_2_ga_ba
    if verbose:
        print("update W_2_out")
    W_2_out = W_2_out - LR * dW_2_out_ga_ba

    W_in_1.touch()
    W_1_2.touch()
    W_2_out.touch()
    return initend, endtime
Beispiel #7
0
def one_step_fit_opt(app, X, y, W_in_1, W_1_2, W_2_out, B_1, B_2, B_out,
                     num_gpus):
    # --forward proprogation--
    # print("start forward proprogation")
    LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    # print(f"X_ga block_shape {X_ga.block_shape}")
    y_ga = GraphArray.from_ba(y, cluster_state)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)
    B_1_ga = GraphArray.from_ba(B_1, cluster_state)
    B_2_ga = GraphArray.from_ba(B_2, cluster_state)
    B_out_ga = GraphArray.from_ba(B_out, cluster_state)

    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga, B_1_ga)
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)
    F_1_ga: GraphArray = opt.sigmoid_deriv(app, Z_1_ga, one_ga)
    # print(f"S_1.shape {S_1.shape} S_1.block_shape {S_1.block_shape}")
    # Z_1_ga: GraphArray = opt.relu(S_1_ga, zero_ga)
    # print(f"Z_1.shape {Z_1.shape} Z_1.block_shape {Z_1.block_shape}")
    # F_1_ga: GraphArray = opt.relu_deriv(S_1_ga, zero_ga, one_ga)

    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga, B_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)
    F_2_ga: GraphArray = opt.sigmoid_deriv(app, Z_2_ga, one_ga)
    # Z_2_ga: GraphArray = opt.relu(S_2_ga, zero_ga)
    # print(f"S_2.shape {S_2.shape} S_2.block_shape {S_2.block_shape}")
    # F_2_ga: GraphArray = opt.relu_deriv(S_2_ga, zero_ga, one_ga)

    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga, B_out_ga)
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)
    # y_predict_ga: GraphArray = opt.relu(S_out_ga, zero_ga)

    # print("start back propogation")
    # --back propogation--
    D_out_ga = opt.collapse_graph_array(app, (y_predict_ga - y_ga).T)
    D_2_ga = opt.collapse_graph_array(app, F_2_ga.T * (W_2_out_ga @ D_out_ga))
    D_1_ga = opt.collapse_graph_array(app, F_1_ga.T * (W_1_2_ga @ D_2_ga))

    D_out_ga_ba = opt.compute_graph_array(app, D_out_ga)
    D_2_ga_ba = opt.compute_graph_array(app, D_2_ga)
    D_1_ga_ba = opt.compute_graph_array(app, D_1_ga)

    S_1_ga_ba = opt.compute_graph_array(app, S_1_ga)
    S_2_ga_ba = opt.compute_graph_array(app, S_2_ga)

    W_in_1: BlockArray = update_weight(app, LR, W_in_1, D_1_ga_ba, X)
    W_1_2: BlockArray = update_weight(app, LR, W_1_2, D_2_ga_ba, S_1_ga_ba)
    W_2_out: BlockArray = update_weight(app, LR, W_2_out, D_out_ga_ba,
                                        S_2_ga_ba)

    B_1: BlockArray = update_bias(app, LR, B_1, D_1_ga_ba)
    B_2: BlockArray = update_bias(app, LR, B_2, D_2_ga_ba)
    B_out: BlockArray = update_bias(app, LR, B_out, D_out_ga_ba)
    # print("Start touching")

    W_in_1.touch()
    W_1_2.touch()
    W_2_out.touch()
    B_1.touch()
    B_2.touch()
    B_out.touch()

    return W_in_1, W_1_2, W_2_out, B_1, B_2, B_out
def one_step_fit_opt(app,
                     X,
                     y,
                     W_in_1,
                     W_1_2,
                     W_2_out,
                     num_gpus,
                     verbose=False):
    # --forward proprogation--
    # print("start forward proprogation")
    LR = app.one
    cluster_state = ClusterState((num_gpus, 1), app.system)
    one_ga: GraphArray = GraphArray.from_ba(app.one, cluster_state)
    X_ga = GraphArray.from_ba(X, cluster_state)
    # print(f"X_ga block_shape {X_ga.block_shape}")
    y_ga = GraphArray.from_ba(y, cluster_state)
    W_in_1_ga = GraphArray.from_ba(W_in_1, cluster_state)
    W_1_2_ga = GraphArray.from_ba(W_1_2, cluster_state)
    W_2_out_ga = GraphArray.from_ba(W_2_out, cluster_state)

    # Distribute Weights
    distribute_weights(app.one, cluster_state)
    # distribute_weights(X, cluster_state)
    # distribute_weights(y, cluster_state)

    if verbose:
        print("forward Z_1_ga")
    Z_1_ga: GraphArray = forward(app, X_ga, W_in_1_ga)  # --> 0/1
    if verbose:
        print("forward S_1_ga")
    S_1_ga: GraphArray = opt.sigmoid(app, Z_1_ga, one_ga)  # --> 0/1
    # distribute_weights(S_1_ga, cluster_state)
    if verbose:
        print("forward F_1_ga")
    F_1_ga: GraphArray = opt.sigmoid_deriv(app, Z_1_ga, one_ga)  # --> 0/1
    # print(f"S_1.shape {S_1.shape} S_1.block_shape {S_1.block_shape}")
    # Z_1_ga: GraphArray = opt.relu(S_1_ga, zero_ga)
    # print(f"Z_1.shape {Z_1.shape} Z_1.block_shape {Z_1.block_shape}")
    # F_1_ga: GraphArray = opt.relu_deriv(S_1_ga, zero_ga, one_ga)
    if verbose:
        print("forward Z_2_ga")
    Z_2_ga: GraphArray = forward(app, S_1_ga, W_1_2_ga)
    S_2_ga: GraphArray = opt.sigmoid(app, Z_2_ga, one_ga)
    F_2_ga: GraphArray = opt.sigmoid_deriv(app, Z_2_ga, one_ga)
    # Z_2_ga: GraphArray = opt.relu(S_2_ga, zero_ga)
    # print(f"S_2.shape {S_2.shape} S_2.block_shape {S_2.block_shape}")
    # F_2_ga: GraphArray = opt.relu_deriv(S_2_ga, zero_ga, one_ga)
    if verbose:
        print("forward Z_out_ga")
    Z_out_ga: GraphArray = forward(app, S_2_ga, W_2_out_ga)  # --> 0/1
    if verbose:
        print("forward y_predict_ga")
    y_predict_ga: GraphArray = opt.sigmoid(app, Z_out_ga, one_ga)  # --> 0/1
    if verbose:
        print("forward F_out_ga")
    F_out_ga: GraphArray = opt.sigmoid_deriv(app, Z_out_ga, one_ga)  # --> 0/1
    # print(F_out_ga.shape) -> (1000,)
    # y_predict_ga: GraphArray = opt.relu(S_out_ga, zero_ga)
    initend = time.time()
    if verbose:
        print(
            "-----------------------------start back propogation-------------------------------"
        )
        print(
            "-----------------------------start back propogation-------------------------------"
        )
        print(
            "-----------------------------start back propogation-------------------------------"
        )
    # --back propogation--
    if verbose:
        print("collapse D_out_ga")
    D_out_ga = opt.collapse_graph_array(app,
                                        F_out_ga.T *
                                        (y_predict_ga - y_ga).T)  # --> 0/1
    # D_out_ga = opt.collapse_graph_array(app, (y_predict_ga - y_ga) * F_out_ga)
    if verbose:
        print("collapse D_2_ga")
    # print(f"W_2_out_ga shape {W_2_out_ga.shape}") -> (2048,)
    # print(f"D_out_ga shape {D_out_ga.shape}") -> (1000,)
    # F_2_ga.shape -> (1000, 2048)
    D_2_ga = opt.collapse_graph_array(app, F_2_ga.T * (W_2_out_ga @ D_out_ga))
    # D_2_ga = opt.collapse_graph_array(app, (D_out_ga @ W_2_out_ga.T) * F_2_ga)
    if verbose:
        print("collapse D_1_ga")
    D_1_ga = opt.collapse_graph_array(app, F_1_ga.T *
                                      (W_1_2_ga @ D_2_ga))  # --> 0/1
    distribute_graph_array(D_1_ga, cluster_state)
    # print(D_1_ga.shape)
    # D_1_ga = opt.collapse_graph_array(app, (D_2_ga @ W_1_2_ga.T) * F_1_ga)

    # print("-----------------------------start computing weights-------------------------------")
    # print("-----------------------------start computing weights-------------------------------")
    # print("-----------------------------start computing weights-------------------------------")
    if verbose:
        print("collapse_graph_array dW_in_1_ga")
    dW_in_1_ga = opt.collapse_graph_array(
        app, (D_1_ga @ X_ga).T)  # --> now all exeucted on GPU 0
    if verbose:
        print("collapse_graph_array dW_1_2_ga")
    dW_1_2_ga = opt.collapse_graph_array(app, (D_2_ga @ S_1_ga).T)
    if verbose:
        print("collapse_graph_array dW_2_out_ga")
    dW_2_out_ga = opt.collapse_graph_array(app, (D_out_ga @ S_2_ga).T)

    endtime = time.time()
    dW_in_1_ga_ba: BlockArray = opt.compute_graph_array(app, dW_in_1_ga)
    dW_1_2_ga_ba: BlockArray = opt.compute_graph_array(app, dW_1_2_ga)
    dW_2_out_ga_ba: BlockArray = opt.compute_graph_array(app, dW_2_out_ga)

    # W_in_1_ga = opt.collapse_graph_array(app, W_in_1_ga - one_ga * (D_1_ga @ X_ga).T)
    # print("collapse_graph_array W_1_2_ga")
    # W_1_2_ga = opt.collapse_graph_array(app, W_1_2_ga - one_ga * (D_2_ga @ S_1_ga).T)
    # print("collapse_graph_array W_2_out_ga")
    # W_2_out_ga = opt.collapse_graph_array(app, W_2_out_ga - one_ga * (D_out_ga @ S_2_ga).T)

    # W_in_1: BlockArray = opt.compute_graph_array(app, W_in_1_ga)
    # W_1_2: BlockArray = opt.compute_graph_array(app, W_1_2_ga)
    # W_2_out: BlockArray = opt.compute_graph_array(app, W_2_out_ga)
    if verbose:
        print("update W_in_1")
    W_in_1 -= dW_in_1_ga_ba
    if verbose:
        print("update W_1_2")
    W_1_2 -= dW_1_2_ga_ba
    if verbose:
        print("update W_2_out")
    W_2_out -= dW_2_out_ga_ba

    # D_out_ga_ba = opt.compute_graph_array(app, D_out_ga)
    # D_2_ga_ba = opt.compute_graph_array(app, D_2_ga)
    # D_1_ga_ba = opt.compute_graph_array(app, D_1_ga)

    # S_1_ga_ba = opt.compute_graph_array(app, S_1_ga)
    # S_2_ga_ba = opt.compute_graph_array(app, S_2_ga)
    # W_in_1: BlockArray = update_weight(app, LR, W_in_1, D_1_ga_ba, X)
    # W_1_2: BlockArray = update_weight(app, LR, W_1_2, D_2_ga_ba, S_1_ga_ba)

    # W_2_out: BlockArray = update_weight(app, LR, W_2_out, D_out_ga_ba, S_2_ga_ba)
    # W - LR * (D @ X).T
    # print("Start touching")
    W_in_1.touch()
    W_1_2.touch()
    W_2_out.touch()

    return initend, endtime