def plotDoubleByDate(datalocation, datatypeA, datatypeB):
figure = plt.figure(num=None,
figsize=(8, 6),
dpi=imageResolution,
facecolor=backgroundFigure,
edgecolor='k')
figure.suptitle("COVID-19: since " + startDate,
fontsize=13,
fontname=defaultFont)
plt.subplot2grid((2, 1), (0, 0))
for i in range(len(datalocation[datatypeA])):
databases[datatypeA][startDate:][datalocation[datatypeA][i]].plot(
kind='line', label=regions[i], linewidth=2.5)
plt.title(dataTitles[datatypeA], fontname=defaultFont, fontsize=10)
plt.legend(loc=0,
shadow=True,
facecolor=backgroundFigure,
prop={
'family': legendFont,
'size': 8
})
plt.grid(which='both', axis='both')
plt.yscale(plotScale)
plt.ylabel("Number of cases", fontname=legendFont)
plt.xlabel("")
plt.minorticks_on()
plt.grid(True,
"major",
"y",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"y",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.grid(True,
"major",
"x",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"x",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.xticks(fontsize=6)
plt.yticks(fontsize=6)
plt.gca().set_facecolor(backgroundPlot)
plt.subplot2grid((2, 1), (1, 0))
for i in range(len(datalocation[datatypeB])):
databases[datatypeB][startDate:][datalocation[datatypeB][i]].plot(
kind='line', label=regions[i], linewidth=2.5)
plt.title(dataTitles[datatypeB], fontname=defaultFont, fontsize=10)
plt.legend(loc=0,
shadow=True,
facecolor=backgroundFigure,
prop={
'family': legendFont,
'size': 8
})
plt.grid(which='both', axis='both')
plt.yscale(plotScale)
plt.ylabel("Number of cases", fontname=legendFont)
plt.xlabel("Time in days", fontname=legendFont)
plt.minorticks_on()
plt.grid(True,
"major",
"y",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"y",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.grid(True,
"major",
"x",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"x",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.xticks(fontsize=6)
plt.yticks(fontsize=6)
plt.gca().set_facecolor(backgroundPlot)
plt.tight_layout(rect=[0, 0, 1, 1])
plt.show()
def plotDoubleNewCases5Av(datalocation, datatypeA, datatypeB, dataguide):
startPoints = regionsStartPoints(regions)
period = databases[dataguide].shape[0] - startPoints[dataguide][
0] - outbreakDayCount
figure = plt.figure(num=None,
figsize=(8, 6),
dpi=imageResolution,
facecolor=backgroundFigure,
edgecolor='k')
figure.suptitle("COVID-19: New cases trend since number " +
str(caseCount) + " " + dataTitles[dataguide],
fontsize=13,
fontname=defaultFont)
plt.subplot2grid((2, 1), (0, 0))
for i in range(len(datalocation[datatypeA])):
startPoint = startPoints[dataguide][i] + outbreakDayCount
if startPoint > 0:
startPoint -= 1
datalist = databases[datatypeA][startPoint:startPoint + period][
regionsIndexes[datatypeA][i]].values.tolist()
datalistsub = getNewCasesAv(getNewCases(datalist))
plt.plot(datalistsub, label=regions[i], linewidth=2.5)
plt.title(dataTitles[datatypeA])
plt.legend(loc=0,
shadow=True,
facecolor=backgroundFigure,
prop={
'family': legendFont,
'size': 8
})
plt.grid()
plt.ylabel("Average of new cases (7 days)", fontname=legendFont)
plt.xlabel("", fontname=legendFont)
plt.yscale(plotScale)
plt.xticks(fontsize=6)
plt.yticks(fontsize=6)
plt.minorticks_on()
plt.grid(True,
"major",
"y",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"y",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.grid(True,
"major",
"x",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"x",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.gca().set_facecolor(backgroundPlot)
plt.subplot2grid((2, 1), (1, 0))
for i in range(len(datalocation[datatypeB])):
startPoint = startPoints[dataguide][i] + outbreakDayCount
if startPoint > 0:
startPoint -= 1
datalist = databases[datatypeB][startPoint:startPoint + period][
regionsIndexes[datatypeB][i]].values.tolist()
datalistsub = getNewCasesAv(getNewCases(datalist))
plt.plot(datalistsub, label=regions[i], linewidth=2.5)
plt.title(dataTitles[datatypeB])
plt.legend(loc=0,
shadow=True,
facecolor=backgroundFigure,
prop={
'family': legendFont,
'size': 8
})
plt.grid()
plt.ylabel("Average of new cases (7 days)", fontname=legendFont)
plt.xlabel("Time in days", fontname=legendFont)
plt.yscale(plotScale)
plt.xticks(fontsize=6)
plt.yticks(fontsize=6)
plt.minorticks_on()
plt.grid(True,
"major",
"y",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"y",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.grid(True,
"major",
"x",
ls="-",
lw=0.8,
c=majorGridColor,
alpha=alphaMGC)
plt.grid(True,
"minor",
"x",
ls="--",
lw=0.3,
c=minorGridColor,
alpha=alphamGC)
plt.gca().set_facecolor(backgroundPlot)
plt.tight_layout(rect=[0, 0, 1, 1])
plt.show()
def plotWeeklyCasesR(regionindexC, regionindexD, region):
figure = plt.figure(num=None,
figsize=(5, 4),
dpi=imageResolution,
facecolor=backgroundFigure,
edgecolor='k')
figure.suptitle(region + ": Weeks analysis ( since " + startDate + ")",
fontsize=12)
weeklyCases = getWeeklyCasesR(regionindexC, 0)
plt.subplot2grid((2, 1), (0, 0))
for w in range(len(weeklyCases) - 1):
plt.plot(weeklyCases[w], linewidth=2.0, color="tab:blue", alpha=0.5)
plt.plot(weeklyCases[len(weeklyCases) - 1],
linewidth=2.5,
color="orange",
alpha=1.0)
plt.plot([0, 6], [
weeklyCases[len(weeklyCases) - 1][0],
weeklyCases[len(weeklyCases) - 1][6]
],
linewidth=1.0,
linestyle="--",
color="tab:red",
alpha=1.0)
plt.title("New confirmed cases by day of the week",
fontsize=10,
fontname=legendFont)
plt.grid()
plt.ylabel("Cases relative\nto week maximum",
fontsize=8,
fontname=legendFont)
ylimits = plt.ylim()
plt.yticks(nu.arange(0, ylimits[1] * 1.2, 0.2))
plt.xticks(nu.arange(0, 7, step=1),
getDaysTags(dayTags, 0),
fontsize=6,
rotation=30)
plt.xticks(fontsize=5)
plt.yticks(fontsize=6)
plt.minorticks_on()
plt.grid(True, "major", "y", ls="-", lw=0.8, c="dimgray", alpha=0.5)
plt.gca().set_facecolor(backgroundPlot)
weeklyCases = getWeeklyCasesR(regionindexD, 1)
plt.subplot2grid((2, 1), (1, 0))
for w in range(len(weeklyCases) - 1):
plt.plot(weeklyCases[w], linewidth=2.0, color="tab:blue", alpha=0.5)
plt.plot(weeklyCases[len(weeklyCases) - 1],
linewidth=2.5,
color="orange",
alpha=1.0)
plt.plot([0, 6], [
weeklyCases[len(weeklyCases) - 1][0],
weeklyCases[len(weeklyCases) - 1][6]
],
linewidth=1.0,
linestyle="--",
color="tab:red",
alpha=1.0)
plt.title("New deaths by day of the week",
fontsize=10,
fontname=legendFont)
plt.grid()
plt.ylabel("Deaths relative\nto week maximum",
fontsize=8,
fontname=legendFont)
ylimits = plt.ylim()
plt.yticks(nu.arange(0, ylimits[1] * 1.2, 0.2))
plt.xticks(nu.arange(0, 7, step=1),
getDaysTags(dayTags, 0),
fontsize=6,
rotation=30)
plt.xticks(fontsize=5)
plt.yticks(fontsize=6)
plt.minorticks_on()
plt.grid(True, "major", "y", ls="-", lw=0.8, c="dimgray", alpha=0.5)
plt.gca().set_facecolor(backgroundPlot)
plt.tight_layout(rect=[0, 0, 1, 1])
plt.show()