def test_main_predict_tarball_cust_feats():
"""Test main predict function - tarball w/ custom feats"""
generate_model_cust_feats()
shutil.copy(pjoin(DATA_PATH, "215153_215176_218272_218934.tar.gz"),
cfg.UPLOAD_FOLDER)
shutil.copy(pjoin(DATA_PATH, "215153_215176_218272_218934_metadata.dat"),
cfg.UPLOAD_FOLDER)
shutil.copy(pjoin(DATA_PATH, "testfeature1.py"),
pjoin(cfg.CUSTOM_FEATURE_SCRIPT_FOLDER,
"TESTRUN_CF.py"))
pred_results_dict = pred.predict(
pjoin(cfg.UPLOAD_FOLDER, "215153_215176_218272_218934.tar.gz"),
"TEMP_TEST01", "RF", "TEMP_TEST01",
metadata_file_path=pjoin(cfg.UPLOAD_FOLDER,
"215153_215176_218272_218934_metadata.dat"),
custom_features_script=pjoin(cfg.CUSTOM_FEATURE_SCRIPT_FOLDER,
"TESTRUN_CF.py"))
os.remove(pjoin(cfg.UPLOAD_FOLDER, "215153_215176_218272_218934.tar.gz"))
os.remove(pjoin(cfg.UPLOAD_FOLDER,
"215153_215176_218272_218934_metadata.dat"))
os.remove(pjoin(cfg.FEATURES_FOLDER, "TEMP_TEST01_features.csv"))
os.remove(pjoin(cfg.FEATURES_FOLDER, "TEMP_TEST01_classes.npy"))
os.remove(pjoin(cfg.MODELS_FOLDER, "TEMP_TEST01_RF.pkl"))
os.remove(pjoin(cfg.CUSTOM_FEATURE_SCRIPT_FOLDER, "TESTRUN_CF.py"))
npt.assert_equal(
len(pred_results_dict["dotastro_215153"]["pred_results_list"]),
3)
npt.assert_equal(len(pred_results_dict), 4)
for res_dict in pred_results_dict.values():
assert(all(el[0] in ['Mira', 'Herbig_AEBE', 'Beta_Lyrae',
'Classical_Cepheid', 'W_Ursae_Maj', 'Delta_Scuti']
for el in res_dict["pred_results_list"]))
def test_main_predict():
"""Test main predict function"""
generate_model()
shutil.copy(pjoin(DATA_PATH, "dotastro_215153.dat"),
pjoin(cfg.UPLOAD_FOLDER, "TESTRUN_215153.dat"))
shutil.copy(pjoin(DATA_PATH, "TESTRUN_215153_metadata.dat"),
cfg.UPLOAD_FOLDER)
pred_results_dict = pred.predict(
pjoin(cfg.UPLOAD_FOLDER, "TESTRUN_215153.dat"),
"TEMP_TEST01", "RF", "TEMP_TEST01",
metadata_file_path=pjoin(cfg.UPLOAD_FOLDER,
"TESTRUN_215153_metadata.dat"),
custom_features_script=None)
os.remove(pjoin(cfg.UPLOAD_FOLDER, "TESTRUN_215153.dat"))
os.remove(pjoin(cfg.UPLOAD_FOLDER, "TESTRUN_215153_metadata.dat"))
os.remove(pjoin(cfg.FEATURES_FOLDER, "TEMP_TEST01_features.csv"))
os.remove(pjoin(cfg.FEATURES_FOLDER, "TEMP_TEST01_classes.npy"))
os.remove(pjoin(cfg.MODELS_FOLDER, "TEMP_TEST01_RF.pkl"))
npt.assert_equal(
len(pred_results_dict["TESTRUN_215153"]["pred_results_list"]),
3)
assert(all(all(el[0] in ['Mira', 'Herbig_AEBE', 'Beta_Lyrae',
'Classical_Cepheid', 'W_Ursae_Maj', 'Delta_Scuti']
for el in pred_results_dict[fname]\
["pred_results_list"]) for fname in pred_results_dict))
def test_predict():
"""Test class prediction."""
results_dict = predict_class.predict(
pjoin(DATA_PATH, "dotastro_215153.dat"),
"TESTRUN",
"RF",
"TESTRUN",
custom_features_script=pjoin(cfg.CUSTOM_FEATURE_SCRIPT_FOLDER, "testfeature1.py"),
metadata_file_path=pjoin(DATA_PATH, "215153_metadata.dat"),
)
assert isinstance(results_dict, dict)
assert "dotastro_215153.dat" in results_dict
assert isinstance(results_dict["dotastro_215153.dat"]["features_dict"]["std_err"], float)