Python Library.library_is_amino_acid Beispiele

Beispiel #1

def get_chain_type(res_name):
    if Library.library_is_amino_acid(res_name):
        #chain_type = 0
        return 0
    elif Library.library_is_nucleic_acid(res_name):
        return 1
    else:
        ## Unknown residue type
        print "# UNKOWN RESIDUE!"
        return 9

Beispiel #2

Datei: skittles.py Projekt: masci/mmLib

def get_chain_type(res_name):
    """Assign an integer value for residue type, identified by the actual name
    of the residue. Assigns "0" to amino acids, "1" to nucleic acids, and "9"
    to everything else.
    """
    if Library.library_is_amino_acid(res_name):
        return 0
    elif Library.library_is_nucleic_acid(res_name):
        return 1
    else:
        ## Unknown residue type
        print "# UNKOWN RESIDUE!"
        return 9

Beispiel #3

def get_chain_type(res_name):
    """Assign an integer value for residue type, identified by the actual name
    of the residue. Assigns "0" to amino acids, "1" to nucleic acids, and "9"
    to everything else.
    """
    if Library.library_is_amino_acid(res_name):
        return 0
    elif Library.library_is_nucleic_acid(res_name):
        return 1
    else:
        ## Unknown residue type
        print "# UNKOWN RESIDUE!"
        return 9