Python MRISubjectSource Beispiele

Beispiel #1

def test_subject_source():
    """Test SubjectSelector"""
    from mne.gui._file_traits import MRISubjectSource

    mri = MRISubjectSource()
    mri.subjects_dir = subjects_dir
    assert_true('sample' in mri.subjects)
    mri.subject = 'sample'

Beispiel #2

Datei: test_file_traits.py Projekt: JuliaSprenger/mne-python

def test_subject_source():
    """Test SubjectSelector"""
    from mne.gui._file_traits import MRISubjectSource

    mri = MRISubjectSource()
    mri.subjects_dir = subjects_dir
    assert_true('sample' in mri.subjects)
    mri.subject = 'sample'

Beispiel #3

def test_subject_source_with_fsaverage():
    """Test SubjectSelector"""
    from mne.gui._file_traits import MRISubjectSource

    mri = MRISubjectSource()
    assert_false(mri.can_create_fsaverage)
    assert_raises(RuntimeError, mri.create_fsaverage)

    mri.subjects_dir = tempdir
    assert_true(mri.can_create_fsaverage)
    mri.create_fsaverage()

Beispiel #4

Datei: test_file_traits.py Projekt: Anevar/mne-python

def test_subject_source_with_fsaverage():
    """Test SubjectSelector"""
    from mne.gui._file_traits import MRISubjectSource

    mri = MRISubjectSource()
    assert_false(mri.can_create_fsaverage)
    assert_raises(RuntimeError, mri.create_fsaverage)

    mri.subjects_dir = tempdir
    assert_true(mri.can_create_fsaverage)
    mri.create_fsaverage()

Beispiel #5

def test_subject_source_with_fsaverage(tmpdir):
    """Test SubjectSelector."""
    from mne.gui._file_traits import MRISubjectSource
    tempdir = str(tmpdir)

    mri = MRISubjectSource()
    assert not mri.can_create_fsaverage
    pytest.raises(RuntimeError, mri.create_fsaverage)

    mri.subjects_dir = tempdir
    assert mri.can_create_fsaverage
    assert not op.isdir(op.join(tempdir, 'fsaverage'))
    # fake FREESURFER_HOME
    with modified_env(FREESURFER_HOME=data_path):
        mri.create_fsaverage()
    assert op.isdir(op.join(tempdir, 'fsaverage'))

Beispiel #6

Datei: test_file_traits.py Projekt: KatarzynaSzlachetka/eeg

def test_subject_source_with_fsaverage():
    """Test SubjectSelector."""
    from mne.gui._file_traits import MRISubjectSource
    tempdir = _TempDir()

    mri = MRISubjectSource()
    assert not mri.can_create_fsaverage
    pytest.raises(RuntimeError, mri.create_fsaverage)

    mri.subjects_dir = tempdir
    assert mri.can_create_fsaverage
    assert not op.isdir(op.join(tempdir, 'fsaverage'))
    # fake FREESURFER_HOME
    old_val = os.getenv('FREESURFER_HOME')
    os.environ['FREESURFER_HOME'] = data_path
    try:
        mri.create_fsaverage()
    finally:
        if old_val is not None:
            os.environ['FREESURFER_HOME'] = old_val
    assert op.isdir(op.join(tempdir, 'fsaverage'))