if ix >= 0:
print (prog)
# try:
# procpool[prog]
# except:
# progfiles[prog]={'ifiles'}
#print r.params[prog]
#params = r.params[prog]
#print 'R',params
#r.params.update(p.params['main'])
for ifile in filelst:
progfiles[prog]
params['ifile'] = ifile
r.params[prog]['ifile'] = ifile
r.genOutputFilename(prog)
ofile = r.params[prog]['ofile']
print (ifile, ofile)
stat = processParFile(phash=r,params=params, processor=prog, sensor=sensor,verbose=verbose)
filelst.remove(ifile)
filelst.append(ofile)
print ('O',stat)
except Exception:
pass
if stat > 0:
sys.exit(1)
else:
print (parser.print_help())
sys.exit(1)
def processParFile(parfile=None, params=None, processor=None, sensor=None,
getanc=False,phash=None,verbose=False):
"""Execute processing for a given parameter file"""
if phash is None:
phash = ParamProcessing(params=params, parfile=parfile)
if parfile:
phash.parseParFile()
pkeys = phash.params.keys()
phash.genOutputFilename(processor)
if processor is None:
try:
processor = phash.params['main']['ocproc']
except Exception:
try:
pkeys.remove('main')
if len(pkeys) == 1:
processor = pkeys[0]
else:
print ("Error! More than 1 processor found.... ")
# sys.exit(1)
status = 1
except Exception:
print ("Error! Need to know what process to run.... Exiting")
# sys.exit(1)
status = 1
if sensor is None:
try:
sensor = phash.params['main']['ocproc_sensor']
except Exception:
pass
# Check for getanc requirement...
try:
getanc = int(phash.params['main']['ocproc_getanc'])
except Exception:
pass
try:
runproc = proc_cmd[processor][sensor]
except Exception:
runproc = processor
try:
nonparcode = nonpar.index(runproc)
except Exception:
nonparcode = -1
# Run getanc if necessary...
if processor in ('l2gen') and getanc:
if verbose:
print ("Retrieving ancillary files...")
fcmd = ''.join(['--file=', phash.params[processor]['ifile']])
anccmd = ['/Users/Shared/seadas7/trunk/python/getanc.py', fcmd]
ancstat = subprocess.call(anccmd)
if ancstat not in (1, 99):
ancparfile = phash.params[processor]['ifile'] + '.anc'
phash.parseParFile(ancparfile)
else:
print ("Ancillary file retreival failed. Exiting...")
status = 1
# sys.exit(1)
print (phash.params[processor])
# Set up process command
if nonparcode >= 0:
w = ProcWrap(phash.params[processor])
w.procSelect(runproc)
cmd = w.procmd
else:
parfilename = phash.params[processor]['ifile'] + '.par'
phash.parfile = parfilename
phash.buildParameterFile(processor)
cmd = ['/Users/Shared/OCSSW/run/bin/' + runproc, 'par=' + parfilename]
print (cmd)
print ('V',verbose)
if verbose:
# print p.parstr
rstr = ' '.join(cmd)
print ("Running:\n ", rstr)
print (phash.params[processor])
# Create output and error log files
try:
ix = cmd.index('>')
outFile = cmd[ix+1]
cmd.remove('>')
cmd.remove(outFile)
except Exception:
outlog = phash.params[processor]['ifile'] + '.log'
outFile = os.path.join(os.curdir, outlog)
print (outlog)
errlog = phash.params[processor]['ifile'] + '.err'
errFile = os.path.join(os.curdir,errlog)
outptr = open(outFile, 'w')
errptr = open(errFile, 'w')
# Call the subprocess using convenience method
status = subprocess.call(cmd, 0, None, None, outptr, errptr)
print ('S', status)
# Close log handles
outptr.close()
errptr.close()
statptr = open(errFile, 'r')
statData = statptr.read()
statptr.close()
# Check the process exit code
if not status == 0:
print ('Error (%s) executing command:\n' % status)
print ('\t', ' '. join(cmd))
print ('\n' + statData)
sys.exit(1)
else:
if verbose:
print (statData)
print ('Processing successful.')
return status #phash.params[processor]['ofile']