def do_search(self,args):
try:
arglist = re.split(r' +',args)
mz = float(arglist[0])
rt = int(arglist[1])
outf = arglist[2]
except IndexError:
print 'usage: search [mz] [rt] [outfile]'
return
with open(outf,'w') as fout:
r = new_search.search(get_engine(),mz,rt,self.ion_mode,self.config)
for line in self._dump_config():
print >>fout, line
for line in new_search.results_as_csv(r):
print >>fout, line
def do_search(self, args):
try:
arglist = re.split(r' +', args)
mz = float(arglist[0])
rt = int(arglist[1])
outf = arglist[2]
except IndexError:
print 'usage: search [mz] [rt] [outfile]'
return
with open(outf, 'w') as fout:
r = new_search.search(get_engine(), mz, rt, self.ion_mode,
self.config)
for line in self._dump_config():
print >> fout, line
for line in new_search.results_as_csv(r):
print >> fout, line
def waldo():
q = request.form.get('query', '')
results = new_search.search(q)
#results = ["hi", "hi", "hi", "hi", "hi"]
return render_template("waldo.html", results = results, query = string.capwords(q) )