def test_fqs_excluding_indices_excludes_index(self, mlistdir):
mlistdir.return_value = [
'foo_1R_.fq', 'foo.sff', 'foo_I2_.fastq', 'foo__I1__.fq'
]
actual = fqs_excluding_indices('D')
expected = ['D/foo_1R_.fq', 'D/foo.sff']
self.assertListEqual(expected, actual)
def test_fqs_excluding_indices_extensions(self, mlistdir):
mlistdir.return_value = candidates = [
'foo.fq', 'foo.sff', 'foo.fastq', 'foo.bad'
]
actual = fqs_excluding_indices('D')
expected = ['D/foo.fq', 'D/foo.sff', 'D/foo.fastq']
self.assertListEqual(expected, actual)
def test_fqs_excluding_indices_excludes_index(self, mlistdir):
mlistdir.return_value = ['foo_1R_.fq', 'foo.sff', 'foo_I2_.fastq', 'foo__I1__.fq']
actual = fqs_excluding_indices('D')
expected = ['D/foo_1R_.fq', 'D/foo.sff' ]
self.assertListEqual(expected, actual)
def test_fqs_excluding_indices_extensions(self, mlistdir):
mlistdir.return_value = candidates = ['foo.fq', 'foo.sff', 'foo.fastq', 'foo.bad']
actual = fqs_excluding_indices('D')
expected = ['D/foo.fq', 'D/foo.sff', 'D/foo.fastq']
self.assertListEqual(expected, actual)
