Beispiel #1
0
def test_mroi2(verbose=0):
    nim =  load(RefImage)
    mroi = MultipleROI(affine=nim.get_affine(), shape=nim.get_shape())
    pos = 1.0*np.array([[10,10,10],[0,0,0],[20,0,20],[0,0,35]])
    rad = np.array([5.,6.,7.,8.0])
    mroi.as_multiple_balls(pos,rad)
    mroi.append_balls(np.array([[-10.,0.,10.]]),np.array([7.0]))
    mroi.set_roi_feature_from_image('T1_signal',RefImage)
    avt1 = mroi.get_roi_feature('T1_signal')
    assert(np.size(avt1)==5)
Beispiel #2
0
def test_mroi1(verbose=0):
    nim =  load(RefImage)
    mroi = MultipleROI(affine=nim.get_affine(), shape=nim.get_shape())
    pos = 1.0*np.array([[10,10,10],[0,0,0],[20,0,20],[0,0,35]])
    rad = np.array([5.,6.,7.,8.0])
    mroi.as_multiple_balls(pos,rad)
    mroi.append_balls(np.array([[-10.,0.,10.]]),np.array([7.0]))
    roiPath = os.path.join(WriteDir,"mroi.nii")
    mroi.make_image(roiPath)
    assert(os.path.isfile(roiPath))