Beispiel #1
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def test_ApplyMask_outputs():
    output_map = dict(out_file=dict(), )
    outputs = ApplyMask.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_ApplyMask_outputs():
    output_map = dict(out_file=dict(),
    )
    outputs = ApplyMask.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Beispiel #3
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def test_ApplyMask_inputs():
    input_map = dict(
        args=dict(argstr='%s', ),
        environ=dict(
            nohash=True,
            usedefault=True,
        ),
        ignore_exception=dict(
            nohash=True,
            usedefault=True,
        ),
        in_file=dict(
            argstr='%s',
            mandatory=True,
            position=-3,
        ),
        invert_xfm=dict(argstr='-invert', ),
        mask_file=dict(
            argstr='%s',
            mandatory=True,
            position=-2,
        ),
        mask_thresh=dict(argstr='-T %.4f', ),
        out_file=dict(
            argstr='%s',
            genfile=True,
            position=-1,
        ),
        subjects_dir=dict(),
        terminal_output=dict(
            mandatory=True,
            nohash=True,
        ),
        use_abs=dict(argstr='-abs', ),
        xfm_file=dict(argstr='-xform %s', ),
        xfm_source=dict(argstr='-lta_src %s', ),
        xfm_target=dict(argstr='-lta_dst %s', ),
    )
    inputs = ApplyMask.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
Beispiel #4
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def test_ApplyMask_inputs():
    input_map = dict(ignore_exception=dict(nohash=True,
    usedefault=True,
    ),
    xfm_file=dict(argstr='-xform %s',
    ),
    use_abs=dict(argstr='-abs',
    ),
    out_file=dict(position=-1,
    genfile=True,
    argstr='%s',
    ),
    args=dict(argstr='%s',
    ),
    xfm_target=dict(argstr='-lta_dst %s',
    ),
    invert_xfm=dict(argstr='-invert',
    ),
    terminal_output=dict(mandatory=True,
    nohash=True,
    ),
    environ=dict(nohash=True,
    usedefault=True,
    ),
    in_file=dict(position=-3,
    mandatory=True,
    argstr='%s',
    ),
    mask_thresh=dict(argstr='-T %.4f',
    ),
    subjects_dir=dict(),
    mask_file=dict(position=-2,
    mandatory=True,
    argstr='%s',
    ),
    xfm_source=dict(argstr='-lta_src %s',
    ),
    )
    inputs = ApplyMask.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value