Beispiel #1
0
def test_BRAINSMultiSTAPLE_inputs():
    input_map = dict(
        args=dict(argstr='%s', ),
        environ=dict(
            nohash=True,
            usedefault=True,
        ),
        ignore_exception=dict(
            nohash=True,
            usedefault=True,
        ),
        inputCompositeT1Volume=dict(argstr='--inputCompositeT1Volume %s', ),
        inputLabelVolume=dict(argstr='--inputLabelVolume %s...', ),
        inputTransform=dict(argstr='--inputTransform %s...', ),
        labelForUndecidedPixels=dict(argstr='--labelForUndecidedPixels %d', ),
        outputConfusionMatrix=dict(
            argstr='--outputConfusionMatrix %s',
            hash_files=False,
        ),
        outputMultiSTAPLE=dict(
            argstr='--outputMultiSTAPLE %s',
            hash_files=False,
        ),
        resampledVolumePrefix=dict(argstr='--resampledVolumePrefix %s', ),
        skipResampling=dict(argstr='--skipResampling ', ),
        terminal_output=dict(nohash=True, ),
    )
    inputs = BRAINSMultiSTAPLE.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_BRAINSMultiSTAPLE_inputs():
    input_map = dict(args=dict(argstr='%s',
    ),
    environ=dict(nohash=True,
    usedefault=True,
    ),
    ignore_exception=dict(nohash=True,
    usedefault=True,
    ),
    inputCompositeT1Volume=dict(argstr='--inputCompositeT1Volume %s',
    ),
    inputLabelVolume=dict(argstr='--inputLabelVolume %s...',
    ),
    inputTransform=dict(argstr='--inputTransform %s...',
    ),
    labelForUndecidedPixels=dict(argstr='--labelForUndecidedPixels %d',
    ),
    outputConfusionMatrix=dict(argstr='--outputConfusionMatrix %s',
    hash_files=False,
    ),
    outputMultiSTAPLE=dict(argstr='--outputMultiSTAPLE %s',
    hash_files=False,
    ),
    resampledVolumePrefix=dict(argstr='--resampledVolumePrefix %s',
    ),
    skipResampling=dict(argstr='--skipResampling ',
    ),
    terminal_output=dict(nohash=True,
    ),
    )
    inputs = BRAINSMultiSTAPLE.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_BRAINSMultiSTAPLE_outputs():
    output_map = dict(outputConfusionMatrix=dict(),
    outputMultiSTAPLE=dict(),
    )
    outputs = BRAINSMultiSTAPLE.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Beispiel #4
0
def test_BRAINSMultiSTAPLE_outputs():
    output_map = dict(
        outputConfusionMatrix=dict(),
        outputMultiSTAPLE=dict(),
    )
    outputs = BRAINSMultiSTAPLE.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value