def test_add_enumerated_item(self):
eni1 = ODM.EnumeratedItem(CodedValue="HGB", OrderNumber=1)
eni1.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C64848")]
self.cl.EnumeratedItem.append(eni1)
eni2 = ODM.EnumeratedItem(CodedValue="VITB12", OrderNumber=2)
eni2.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C64817")]
self.cl.EnumeratedItem.append(eni2)
eni3 = ODM.EnumeratedItem(CodedValue="GLUC", OrderNumber=3)
eni3.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C41376")]
self.cl.EnumeratedItem.append(eni3)
ei_dict = self.cl.to_dict()
print(ei_dict)
self.assertDictEqual(ei_dict, self.expected_eni_dict())
def test_to_dict(self):
attrs = self._set_attributes()
eni = ODM.EnumeratedItem(**attrs)
eni.Alias.append(ODM.Alias(Context="nci:ExtCodeID", Name="C64848"))
eni_dict = eni.to_dict()
self.assertEqual(eni_dict["CodedValue"], "HGB")
self.assertDictEqual(eni_dict, self.expected_dict())
def test_to_xml(self):
attrs = self._set_attributes()
eni = ODM.EnumeratedItem(**attrs)
eni.Alias.append(ODM.Alias(Context="nci:ExtCodeID", Name="C64848"))
eni_xml = eni.to_xml()
self.assertEqual(eni_xml.attrib["CodedValue"], "HGB")
alias_elem = eni_xml.find("Alias")
self.assertEqual(alias_elem.attrib["Name"], "C64848")
def test_to_dict(self):
attrs = self._set_attributes()
cl = ODM.CodeList(**attrs)
eni = ODM.EnumeratedItem(CodedValue="HGB", OrderNumber=1)
eni.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C64848")]
cl.EnumeratedItem.append(eni)
eni.Alias.append(ODM.Alias(Context="nci:ExtCodeID", Name="C65047"))
cl_dict = cl.to_dict()
self.assertDictEqual(cl_dict, self.expected_json_dict())
def test_to_xml(self):
attrs = self._set_attributes()
cl = ODM.CodeList(**attrs)
eni = ODM.EnumeratedItem(CodedValue="HGB", OrderNumber=1)
eni.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C64848")]
cl.EnumeratedItem.append(eni)
eni.Alias.append(ODM.Alias(Context="nci:ExtCodeID", Name="C65047"))
cl_xml = cl.to_xml()
self.assertEqual(cl_xml.attrib["OID"], "ODM.CL.LBTESTCD")
ei = cl_xml.find("EnumeratedItem")
self.assertEqual(ei.attrib["CodedValue"], "HGB")
def test_CodeList(self):
attrs = {
"OID": "ODM.CL.LBTESTCD",
"Name": "Laboratory Test Code",
"DataType": "text"
}
cl = ODM.CodeList(**attrs)
eni = ODM.EnumeratedItem(CodedValue="HGB", OrderNumber=1)
eni.Alias = [ODM.Alias(Context="nci:ExtCodeID", Name="C64848")]
cl.EnumeratedItem.append(eni)
eni.Alias.append(ODM.Alias(Context="nci:ExtCodeID", Name="C65047"))
cl_dict = cl.to_dict()
print(cl_dict)
is_valid = self.validator.verify_conformance(cl_dict, "CodeList")
self.assertTrue(is_valid)
def setUp(self) -> None:
attrs = self._set_attributes()
self.eni = ODM.EnumeratedItem(**attrs)