def printLookupFunction(func):
if isinstance(func, orange.Variable):
if not func.getValueFrom:
raise TypeError("attribute '%s' does not have an associated function" % func.name)
else:
func = func.getValueFrom
outp = ""
if isinstance(func, orange.ClassifierByExampleTable):
# XXX This needs some polishing :-)
for i in func.sortedExamples:
outp += "%s\n" % i
else:
boundset = func.boundset()
for a in boundset:
outp += "%s\t" % a.name
outp += "%s\n" % func.classVar.name
outp += "------\t" * (len(boundset)+1) + "\n"
lc = 0
if len(boundset)==1:
cnt = orngMisc.LimitedCounter([len(x.values)+1 for x in boundset])
else:
cnt = orngMisc.LimitedCounter([len(x.values) for x in boundset])
for ex in cnt:
for i in range(len(ex)):
if ex[i]<len(boundset[i].values):
outp += "%s\t" % boundset[i].values[ex[i]]
else:
outp += "?\t",
outp += "%s\n" % func.classVar.values[int(func.lookupTable[lc])]
lc += 1
return outp
def createClassVar(attributes, MQCNotation=False):
import orngMisc
if MQCNotation:
return orange.EnumVariable(
"Q",
values=[
"%s(%s)" % ("".join(["+-"[x] for x in v if x < 2]), ", ".join(
[attr for attr, x in zip(attributes, v) if x < 2]))
for v in orngMisc.LimitedCounter([3] * len(attributes))
])
else:
return orange.EnumVariable(
"Q",
values=[
"Q(%s)" % ", ".join([
"+-"[x] + attr for attr, x in zip(attributes, v) if x < 2
]) for v in orngMisc.LimitedCounter([3] * len(attributes))
])
def lookupFromFunction(attribute, bound, function):
"""
Constructs ClassifierByExampleTable or ClassifierByLookupTable mirroring the given function
"""
lookup = lookupFromBound(attribute, bound)
if lookup:
lookup.lookupTable = [
orange.Value(attribute, function(attributes)) for attributes in
orngMisc.LimitedCounter([len(attr.values) for attr in bound])
]
return lookup
else:
examples = orange.ExampleTable(orange.Domain(bound, attribute))
for attributes in orngMisc.LimitedCounter(
[len(attr.values) for attr in dom.attributes]):
examples.append(
orange.Example(dom, attributes + [function(attributes)]))
return orange.LookupLearner(examples)
def __call__(self, table, bound, weightID=0):
if not len(bound):
raise AttributeError, "no bound attributes"
bound = [table.domain[a] for a in bound]
newVar = orange.EnumVariable("-".join([a.name for a in bound]))
if (len(bound) == 1):
newVar.values = list(bound[0].values)
clsfr = orange.ClassifierByLookupTable(newVar, bound[0])
else:
import orngMisc
for vs in orngMisc.LimitedCounter([len(a.values) for a in bound]):
newVar.values.append("-".join(
[bound[i].values[v] for i, v in enumerate(vs)]))
clsfr = orange.ClassifierByLookupTable(newVar, bound)
## elif (len(bound)==2):
## for v1 in bound[0].values:
## for v2 in bound[1].values:
## newVar.values.append(v1+"-"+v2)
## clsfr = orange.ClassifierByLookupTable2(newVar, bound[0], bound[1])
## elif (len(bound)==3):
## for v1 in bound[0].values:
## for v2 in bound[1].values:
## for v3 in bound[2].values:
## newVar.values.append(v1+"-"+v2+"-"+v3)
## clsfr = orange.ClassifierByLookupTable3(newVar, bound[0], bound[1], bound[2])
## else:
## raise AttributeError, "cannot deal with more than 3 bound attributes"
for i in range(len(newVar.values)):
clsfr.lookupTable[i] = orange.Value(newVar, i)
newVar.getValueFrom = clsfr
if self.measure:
meas = self.measure(newVar, table)
else:
meas = 0
return newVar, meas
def __call__(self, table, weight=None, verbose=0):
import orngTest, orngStat, orngMisc
evaluate = getattr(self, "evaluate", orngStat.CA)
folds = getattr(self, "folds", 5)
compare = getattr(self, "compare", cmp)
verbose = verbose or getattr(self, "verbose", 0)
returnWhat = getattr(self, "returnWhat",
Tune1Parameter.returnClassifier)
progressCallback = getattr(self, "progressCallback", lambda i: None)
to_set = []
parnames = []
for par in self.parameters:
if (type(par[0]) == list) or (type(par[0]) == tuple):
to_set.append([self.findobj(ld) for ld in par[0]])
parnames.append(par[0])
else:
to_set.append([self.findobj(par[0])])
parnames.append([par[0]])
cvind = orange.MakeRandomIndicesCV(table, folds)
findBest = orngMisc.BestOnTheFly(seed=table.checksum(),
callCompareOn1st=True)
tableAndWeight = weight and (table, weight) or table
numOfTests = sum([len(x[1]) for x in self.parameters])
milestones = set(range(0, numOfTests, max(numOfTests / 100, 1)))
for itercount, valueindices in enumerate(
orngMisc.LimitedCounter([len(x[1]) for x in self.parameters])):
values = [
self.parameters[i][1][x] for i, x in enumerate(valueindices)
]
for pi, value in enumerate(values):
for i, par in enumerate(to_set[pi]):
setattr(par[0], par[1], value)
if verbose == 2:
print("%s: %s" % (parnames[pi][i], value))
res = evaluate(
orngTest.testWithIndices([self.object], tableAndWeight, cvind))
if itercount in milestones:
progressCallback(100.0 * itercount / numOfTests)
findBest.candidate((res, values))
if verbose == 2:
print("===> Result: %s\n" % res)
bestpar = findBest.winner()[1]
if verbose:
print("*** Optimal set of parameters: ", end=' ')
for pi, value in enumerate(bestpar):
for i, par in enumerate(to_set[pi]):
setattr(par[0], par[1], value)
if verbose:
print("%s: %s" % (parnames[pi][i], value), end=' ')
if verbose:
print()
if returnWhat == Tune1Parameter.returnNone:
return None
elif returnWhat == Tune1Parameter.returnParameters:
return bestpar
elif returnWhat == Tune1Parameter.returnLearner:
return self.object
else:
classifier = self.object(table)
classifier.fittedParameters = bestpar
return classifier
