def get_oggm_panel():
geo_bounds = BoundsXY(source=static_geo, rename={'bounds': 'cenlon__cenlat'})
elev_bounds = BoundsXY(source=static_elev, rename={'bounds': 'mean_elev__latdeg'})
temp_bounds = BoundsX(source=static_temp, rename={'boundsx': 'avg_temp_at_mean_elev'})
prcp_bounds = BoundsX(source=static_prcp, rename={'boundsx': 'avg_prcp'})
selections = [geo_bounds, elev_bounds, temp_bounds, prcp_bounds]
dyn_data = hv.DynamicMap(select_data, streams=selections)
dyn_geo = rasterize(dyn_data.apply(geo), **geo_kw).options( **geo_opts)
dyn_elev = datashade(dyn_data.apply(elev), **elev_kw).options(**elev_opts)
dyn_temp = dyn_data.apply(temp)
dyn_prcp = dyn_data.apply(prcp)
dyn_count = dyn_data.apply(count)
geomap = geo_bg * static_geo * dyn_geo
elevation = static_elev * dyn_elev
temperature = static_temp * dyn_temp
precipitation = static_prcp * dyn_prcp
def clear_selections(arg=None):
geo_bounds.update(bounds=None)
elev_bounds.update(bounds=None)
temp_bounds.update(boundsx=None)
prcp_bounds.update(boundsx=None)
Stream.trigger(selections)
clear_button = pn.widgets.Button(name='Clear selection')
clear_button.param.watch(clear_selections, 'clicks');
title = '<div style="font-size:35px">World glaciers explorer</div>'
instruction = 'Box-select on each plot to subselect; clear selection to reset.<br>' + \
'See the <a href="https://github.com/panel-demos/glaciers">Jupyter notebook</a> source code for how to build apps like this!'
oggm_logo = '<a href="https://oggm.org"><img src="https://raw.githubusercontent.com/OGGM/oggm/master/docs/_static/logos/oggm_s_alpha.png" width=170></a>'
pn_logo = '<a href="https://panel.pyviz.org"><img src="https://panel.pyviz.org/_static/logo_stacked.png" width=140></a>'
header = pn.Row(pn.Pane(oggm_logo), pn.layout.Spacer(width=30),
pn.Column(pn.Pane(title, width=400), pn.Pane(instruction, width=500)),
pn.layout.HSpacer(), pn.Column(pn.Pane(dyn_count), pn.layout.Spacer(height=20), clear_button),
pn.Pane(pn_logo, width=140))
return pn.Column(header, pn.Row(geomap, elevation), pn.Row(temperature, precipitation), width_policy='max', height_policy='max')
def view(self) -> pn.Column:
"""Returns the view of the application
Returns:
pn.Column: The view of the app
"""
pn.config.sizing_mode = "stretch_width"
pn.extension("echarts")
top_app_bar = pn.Row(
pn.pane.PNG(
"https://echarts.apache.org/en/images/logo.png",
sizing_mode="fixed",
height=40,
margin=(15, 0, 5, 25),
embed=False,
),
pn.layout.VSpacer(),
"",
background="lightgray",
height=70,
)
settings_pane = pn.Param(
self,
show_name=False,
width=200,
sizing_mode="fixed",
background="rgb(245, 247, 250)",
)
main = [
APPLICATION.intro_section(),
pn.Column(
top_app_bar,
pn.layout.HSpacer(height=50),
pn.Row(self.plot, settings_pane, sizing_mode="stretch_width"),
),
]
return pn.template.FastListTemplate(title="Test ECharts",
theme="default",
main=main,
theme_toggle=False)
def update_banner():
"""Update the banner"""
fullpath = os.path.abspath(path)
banner = pn.Row(
pn.pane.Markdown(
'<h4>epitopepredict: %s</h4> [help](%s) version %s' %
(fullpath, helppage, __version__),
css_classes=['divheader'],
sizing_mode='stretch_width'))
return banner
def on_edos_plotter_btn(self):
if self.edos_plotter_btn.clicks == 0: return
edos_plotter = self.robot.get_edos_plotter()
plot_mode = self.edos_plotter_mode.value
plotfunc = getattr(edos_plotter, plot_mode, None)
if plotfunc is None:
raise ValueError("Don't know how to handle plot_mode: %s" %
plot_mode)
fig = plotfunc(**self.fig_kwargs)
return pn.Row(pn.Column(self._mp(fig)), sizing_mode='scale_width')
def panel(self):
"view the app"
return pn.Column(
pn.Row(
pn.Spacer(width=30),
pn.Column(self.view_left_plot, ),
pn.Column(self.view_right_plot, ),
),
self.date_slider,
)
def build_gui(self):
self.source = ColumnDataSource({"x": self.data[0], "y": self.data[1]})
p = figure(x_axis_label=self.x_label,
y_axis_label=self.y_label,
width=self.width,
height=self.height,
tools="lasso_select")
p.scatter("x", "y", source=self.source)
p.select_one(LassoSelectTool).select_every_mousemove = False
self.figure = p
self.gui = pn.Row(self.figure)
def widget_plot_module(self):
if isinstance(self.Aruco, MarkerDetection):
marker = pn.Column(self.widgets_aruco_visualization(), self.widget_thread_controller())
widgets = pn.Column(self.cmap_frame.show_widgets(),
self.contours.show_widgets())
rows = pn.Row(widgets, marker)
else:
widgets = pn.Column(self.cmap_frame.show_widgets(),
self.contours.show_widgets())
rows = pn.Row(widgets, self.widget_thread_controller())
panel1 = pn.Column("## Plotting interaction widgets", rows)
self._update_widget_module_selector()
panel2 = self.projector.show_widgets_sidepanels()
panel = pn.Tabs(("Main frame controller", panel1),
("Side panel controller", panel2))
return panel
def show(df_x, df_y, mlp, xs, ys):
y = np.ravel(ys.transform(df_y))
y_pred = mlp.predict(xs.transform(df_x))
r2 = mlp.score(xs.transform(df_x), y)
print('Score: ', r2)
return pn.Column(
pn.Row(
hv.Scatter((y, y_pred)).opts(aspect='square'),
hv.Distribution(y_pred - y).opts(aspect='square')),
hv.Curve((df_y.index, y_pred), label='prediction') * hv.Curve(
(df_y.index, y), label='target').opts(width=800))
def show_widget_legend(self):
self._create_widgets_legend()
panel3 = pn.Column("### Legend",
self._widgets_show_legend,
self._widget_refresh_leg)
panel4 = pn.Column(self._widget_top_legend,
self._widget_left_legend,
self._widget_width_legend,
self._widget_height_legend,
self._widget_leg_background)
return pn.Row(panel3, panel4)
def _build_output(self, fig):
kwargs = {}
if hasattr(self, 'widgets'):
kwargs['widgets'] = self.widgets
buttons = pn.Row(self.plot_button, self.file_download)
output = pn.Column(pn.Param(self.param, **kwargs), self.select_dataset,
self.subsetter, self.purpose, buttons,
self.browser_url, fig)
if self.viewer is not None:
self.viewer._panels[self.name] = self.browser_url
return output
def _previous(self, _):
"""Logic for the previous button"""
index = int(self.current.value)
if index == 1:
index = self.num_entries
else:
index -= 1
self.UPDATING = True
self.current.value = str(index)
self.UPDATING = False
self.image = pn.Row(self.get_image_by_index(index - 1), align="center")
def get_title(text, uuid=None):
"""Return pn.Row representation of title.
Includes provenance link, if uuid is specified.
"""
title = pn.Row(pn.pane.Markdown('#### ' + text), align='start')
if uuid is not None:
title.append(provenance_link(uuid))
return title
def headline(label, popup_label=None, style=None):
"""Create an HTML headline pane for the given parameter"""
widget = pn.Row(
pn.pane.HTML(
f"<b>{label}</b>", css_classes=["headline"], sizing_mode="stretch_width"
)
)
if popup_label is not None:
widget.insert(0, pn.pane.HTML(popup(label=popup_label, style=style)))
return widget
def show_widget_colorbar(self):
self._create_widgets_colorbar()
panel1 = pn.Column("### Colorbar", self._widgets_show_colorbar,
self._widget_label, self._widget_refresh_col)
panel2 = pn.Column(self._widget_colorbar_ori,
self._widget_top_colorbar,
self._widget_left_colorbar,
self._widget_width_colorbar,
self._widget_height_colorbar,
self._widget_col_background)
return pn.Row(panel1, panel2)
def get_panel(self):
"""Return tabs with widgets to interact with the |PhononBandsPlotter|."""
tabs = pn.Tabs()
ws = pn.Column(self.phbands_plotter_mode, self.phbands_plotter_units,
self.phbands_plotter_btn)
tabs.append(("PhbandsPlotter",
pn.Row(ws,
self.on_phbands_plot_btn,
sizing_mode='scale_width')))
return tabs
def _options_pane_setup(self):
self.options_pane.clear()
self.options_pane.extend([
pn.pane.Markdown("""### Colormaps"""),
pn.Column(
self.colormap,
pn.Column(
pn.Row(self.colormap_min, pn.layout.HSpacer(),
self.colormap_max),
self.colormap_range_slider,
),
self.colormap_delta,
),
pn.pane.Markdown("""### Change Values"""),
pn.Column(
self.spinner,
self.apply,
pn.Row(self.undo_button, self.redo_button),
),
])
def panel(self):
return pn.Column(
pn.Row(
self.pipeline.title,
self.pipeline.network,
self.pipeline.prev_button,
self.pipeline.next_button,
),
self.pipeline.stage,
sizing_mode='stretch_width',
)
def build_gui(self):
self.dataset_filter = self.DATASET_FILTER(
self.base_dataset,
columns=self.DATASET_FILTER_COLUMNS,
width=self.width,
height=self.height - 50)
self.dataset_filter_create_dataset_button = pnw.Button(name="Create",
height=50)
self.dataset_filter_create_dataset_button.on_click(self.create_dataset)
self.dataset_filter_with_export = pn.Column(
pn.Row(self.dataset_filter.show(), align="center"),
pn.Row(self.dataset_filter_create_dataset_button, align="center"))
if self.with_dataset_overview:
self.created_datasets_overview = self.MULTI_DATASET_OVERVIEW(
self.created_datasets,
with_del_button=True,
height=150,
width=self.width)
self.selected_dataset_overview = self.DATASET_OVERVIEW(
self.base_dataset, height=self.height - 250,
width=self.width).gui
else:
self.created_datasets_overview = self.MULTI_DATASET_OVERVIEW(
self.created_datasets,
with_del_button=True,
height=self.height - 100,
width=self.width)
self.selected_dataset_overview = pn.Spacer(
sizing_mode="stretch_both")
self.export_gui = self.create_export_gui()
self.datasets_overview = pn.Column(
pn.Row(self.created_datasets_overview.gui, align="center"),
pn.Row(self.selected_dataset_overview, align="center"),
pn.Row(self.export_gui, align="center"))
if self.with_dataset_overview:
self.created_datasets_overview.overview_table.param.watch(
self.update_dataset_overview, "selection")
self.gui = pn.Tabs(("Dataset Filter", self.dataset_filter_with_export),
("Dataset Overview", self.datasets_overview))
def delete_panel(self):
if self.show_delete_panel:
delete_btn = pn.widgets.Button(name='Delete',
button_type='danger',
width=100)
delete_btn.on_click(self._delete_selected_profile)
cancel_btn = pn.widgets.Button(name='Cancel',
button_type='primary',
width=100)
cancel_btn.on_click(lambda e: self.update_delete_panel(False))
code = 'o.disabled=true; ' \
'btn.css_classes.push("pn-loading", "arcs"); btn.properties.css_classes.change.emit();'
delete_btn.js_on_click(args={
'btn': delete_btn,
'o': cancel_btn
},
code=code)
cancel_btn.js_on_click(args={
'btn': cancel_btn,
'o': delete_btn
},
code=code)
return pn.Column(
self.param.environment_profile_delete,
pn.pane.Alert(
'Are you sure you want to delete the selected profile? This action cannot be undone.',
alert_type='danger'),
pn.Row(delete_btn, cancel_btn, align='end'))
else:
delete_btn = pn.widgets.Button(name='Delete Selected Profile',
button_type='danger',
width=200)
delete_btn.on_click(lambda e: self.update_delete_panel(True))
code = 'btn.css_classes.push("pn-loading", "arcs"); btn.properties.css_classes.change.emit();'
delete_btn.js_on_click(args={'btn': delete_btn}, code=code)
return pn.Column(self.param.environment_profile_delete,
pn.Row(delete_btn, align='end'))
def panel(self):
load_tab = pn.Column(
pn.panel(self.param, parameters=['filepath'], show_name=False),
pn.panel(self.scatter_projection.param, expand_button=False),
pn.panel(self.param, parameters=['load_data'], show_name=False))
map_pane = self.view_map
interp_pane = pn.Column(
pn.panel(self.param,
parameters=['interpolation_option', 'nodal_function'],
show_name=False),
pn.Row(
pn.panel(self.param,
parameters=['truncation', 'truncation_range'],
show_name=False), ),
pn.panel(self.param, parameters=['interp_button'],
show_name=False))
display_tab = pn.Column(
pn.panel(self.cmap_opts.param,
parameters=['colormap'],
show_name=False),
pn.panel(self.display_range.param,
parameters=['color_range'],
show_name=False),
pn.panel(self.param,
parameters=['scatter_toggle'],
show_name=False),
pn.panel(self.adh_mod.mesh.param,
parameters=['elements_toggle', 'elevation_toggle'],
show_name=False),
pn.panel(self.adh_mod.wmts.param,
parameters=['source'],
expand_button=False,
show_name=False))
tool_panel = pn.Tabs(('Load Data', load_tab), ('Display', display_tab),
('Interpolate', interp_pane))
return pn.Row(map_pane, tool_panel)
def update_sorting(self, event):
"""Calculates the new index order for sorting."""
sort_ascending = False if "Desc." in self.sort_order.value else True
data = getattr(self.data, self.gallery_desciptor).sort_values(
self.sorter.value, ascending=sort_ascending)
if "Drop duplicates" in self.sort_order.value:
data = data.drop_duplicates(self.img_id_col)
self.num_entries = data.shape[0]
self.image_count = pn.Row("/" + str(self.num_entries),
width=int(self.width / 6))
self.gui_image_selection_controlls[2] = self.image_count
self.index_mapping = data.reset_index(drop=True)
def create_export_gui(self):
self.export_path = pnw.TextInput(name="Export path", value="datasets", height=50)
self.export_button = pnw.Button(name="Export", align="end", height=50)
self.export_button.on_click(self.export_datasets)
export_dataset_name = "" if len(self.created_datasets) == 0 else self.created_datasets[self.export_dataset_overview.selection[0]].name
export_description_name = "" if len(self.created_datasets) == 0 else self.created_datasets[self.export_dataset_overview.selection[0]].description
self.export_name_input = pnw.TextInput(name="Dataset name", value=export_dataset_name, height=50)
self.export_name_input.param.watch(self.change_dataset_name, "value")
self.export_description_input = pnw.TextAreaInput(name="Description", value=export_description_name, height=50)
self.export_description_input.param.watch(self.change_dataset_description, "value")
return pn.Column(pn.Row(self.export_name_input, self.export_description_input), pn.Row(self.export_path, self.export_button))
def view_fort_file(self):
dirpath = self.dirname2path[self.dir_select.value]
fort_file = self._find_fort_file(dirpath)
# Update widgets.
self.pubproc_select.options = list(fort_file.all_public_procedures.keys())
self.datatype_select.options = list(fort_file.all_datatypes.keys())
if hasattr(self, "tabs"): self.tabs.active = 1
return pn.Row(_df(fort_file.get_stats()),
fort_file.get_graphviz(engine=self.engine.value),
sizing_mode="scale_width")
def _create_view(self):
self.settings_panel = pn.Param(
self, parameters=["value_a", "value_b", "value_c"])
self.plot_panel = pn.pane.HoloViews(sizing_mode="stretch_width")
self.progress = pn.widgets.Progress(sizing_mode="stretch_width",
bar_color="primary")
self.view = pn.Column(
self.progress,
pn.Row(pn.WidgetBox(self.settings_panel),
self.plot_panel,
sizing_mode="stretch_width"),
)
def __init__(self, cats=None):
self.source = SourceGUI()
self.cat = CatGUI(cats=cats, done_callback=self.done_callback)
self.panel = pn.Column(pn.Row(pn.panel(ICONS['logo']),
pn.Column(self.cat.select.panel,
self.cat.control_panel,
margin=0,
width_policy='max'),
pn.Column(self.source.select.panel,
self.source.control_panel,
margin=0,
width_policy='max'),
self.source.description.panel,
margin=0,
width_policy='max'),
pn.Row(self.cat.search.panel,
self.cat.add.panel,
self.source.plot.panel,
width_policy='max'),
width_policy='max')
super(GUI, self).__init__()
def widget_boreholes(self):
self._widget_show_boreholes = pn.widgets.Button(
name="Show Boreholes panel", button_type="success")
self._widget_show_boreholes.param.watch(self._callback_show_boreholes,
'clicks',
onlychanged=False)
self._widget_show_boreholes_pyvista = pn.widgets.Button(
name="Show Boreholes pyvista", button_type="warning")
self._widget_show_boreholes_pyvista.param.watch(
self._callback_show_boreholes_pyvista, 'clicks', onlychanged=False)
self._w_borehole_name = pn.widgets.TextInput(name='Borehole name',
value='BH_1')
self._w_x = pn.widgets.TextInput(name='x:', value='10.0', width=60)
self._w_y = pn.widgets.TextInput(name='y:', value='20.0', width=60)
self._widget_add_bh = pn.widgets.Button(name="Add borehole",
button_type="success")
self._widget_add_bh.param.watch(self._callback_add_bh,
'clicks',
onlychanged=False)
self._w_remove_borehole_name = pn.widgets.AutocompleteInput(
name='Remove borehole name',
options=list(self.borehole_dict.keys()))
self._widget_remove_bh = pn.widgets.Button(name="Remove borehole",
button_type="success")
self._widget_remove_bh.param.watch(self._callback_remove_bh,
'clicks',
onlychanged=False)
self._widget_boreholes_available = pn.widgets.RadioBoxGroup(
name='Available boreholes',
options=list(self.borehole_dict.keys()),
inline=False,
disabled=True)
widgets = pn.Column(
'### Creation of boreholes',
self._widget_show_boreholes,
self._widget_show_boreholes_pyvista,
'<b>add new borehole </b>',
pn.WidgetBox(self._w_borehole_name, pn.Row(self._w_x, self._w_y)),
self._widget_add_bh,
'<b>Remove borehole</b>',
self._w_remove_borehole_name,
self._widget_remove_bh,
'<b>Loaded boreholes</b>',
self._widget_boreholes_available,
)
# TODO: add method to include more boreholes
return widgets
def gui_progress(self):
if self._progress is None:
self._progress = pn.indicators.Progress(value=0,
active=self._active,
align="center")
npages = 0
if self.page_number:
npages = len(self.page_numbers)
if npages:
self._progress.value = int(100 * self.page_number / npages)
return pn.Row(self._progress,
f"[{self.page_number or 'NA'} / {npages or 'NA'}]")
def panel(self):
return pn.Row(
pn.Column(
pn.pane.Markdown(f'##{self.param.name_of_page.default}'),
self.options_page,
),
pn.Column(
pn.Spacer(height=52),
self.df_pane,
self.continue_button_pane,
))
def setup(self):
self.instructions = pn.pane.Markdown(self.instructions_contents,
align='center',
width_policy='max')
self.select = pn.widgets.Select(options=self.options,
height=30,
align='center',
min_width=200)
self.pane = pn.pane.HoloViews(self._plot_object(self.selected),
name="Plot")
self.watchers = [
self.select.param.watch(self.callback, ['options', 'value']),
self.custom.param.watch(self.interact, ['clicks'])
]
self.out = pn.Row(self.pane, name="Plot")
self.children = [
pn.Row(self.instructions, self.select, self.custom),
self.out,
]
def setup(self):
self.watchers = [
self.plot_widget.param.watch(self.on_click_plot_widget, 'value'),
self.select.widget.link(self.description, value='source'),
]
self.children = [
pn.Row(pn.Column(self.select.panel, self.control_panel, margin=0),
self.description.panel,
margin=0),
self.plot.panel,
]
