def test_simple(): test = """ 5 10 spp1 actgactgaa spp2 tctgtctgtt spp3 agtgagtgaa spp4 actaactaaa spp5 acagacagaa """ alignment.parse(test)
def test_interleaved(): test = """ 5 30 spp1 actgactgaa spp2 tctgtctgtt spp3 agtgagtgaa spp4 actaactaaa spp5 acagacagaa actgactgaa tctgtctgtt agtgagtgaa actaactaaa acagacagaa actgactgaa tctgtctgtt agtgagtgaa actaactaaa acagacagaa """ alignment.parse(test)