def _parse_commit(commit):
"""
Arguments:
commit(git.Commit): commit object
Returns:
MinorVersion: namedtuple of minor version (date author email checksum desc parents)
"""
checksum = str(commit)
commit_parents = [str(parent) for parent in commit.parents]
commit_author_info = commit.author
if not commit_author_info:
perun_log.error("fatal: malform commit {}".format(checksum))
author, email = commit_author_info.name, commit_author_info.email
timestamp = commit.committed_date
date = timestamps.timestamp_to_str(int(timestamp))
commit_description = str(commit.message)
if not commit_description:
perun_log.error("fatal: malform commit {}".format(checksum))
return MinorVersion(date, author, email, checksum, commit_description,
commit_parents)
def register_in_index(base_dir, minor_version, registered_file,
registered_file_checksum):
"""Registers file in the index corresponding to the minor_version
If the index for the minor_version does not exist, then it is touched and initialized
with empty prefix. Then the entry is added to the file.
Arguments:
base_dir(str): base directory of the minor version
minor_version(str): sha-1 representation of the minor version of vcs (like e.g. commit)
registered_file(path): filename that is registered
registered_file_checksum(str): sha-1 representation fo the registered file
"""
# Create the directory and index (if it does not exist)
minor_dir, minor_index_file = split_object_name(base_dir, minor_version)
touch_dir(minor_dir)
touch_index(minor_index_file)
modification_stamp = timestamps.timestamp_to_str(
os.stat(registered_file).st_mtime)
entry_name = os.path.split(registered_file)[-1]
entry = IndexEntry(modification_stamp, registered_file_checksum,
entry_name, -1)
write_entry_to_index(minor_index_file, entry)
reg_rel_path = os.path.relpath(registered_file)
perun_log.info(
"'{}' successfully registered in minor version index".format(
reg_rel_path))
def get_untracked_profiles(pcs):
"""Returns list untracked profiles, currently residing in the .perun/jobs directory.
Arguments:
pcs(PCS): performance control system
Returns:
list: list of ProfileInfo parsed from .perun/jobs directory
"""
profile_list = []
# Transform each profile of the path to the ProfileInfo object
for untracked_path in os.listdir(pcs.get_job_directory()):
if not untracked_path.endswith('perf'):
continue
real_path = os.path.join(pcs.get_job_directory(), untracked_path)
time = timestamp.timestamp_to_str(os.stat(real_path).st_mtime)
# Update the list of profiles and counters of types
profile_info = profile.ProfileInfo(untracked_path,
real_path,
time,
is_raw_profile=True)
profile_list.append(profile_info)
return profile_list
def profile_pool_to_info(profile_pool):
"""
Arguments:
profile_pool(list): list of profiles
Returns:
generator: yield profile information as tuple (type, split name, time)
"""
for profile in profile_pool:
with open(profile, 'r') as profile_handle:
profile_contents = json.load(profile_handle)
profile_time = timestamps.timestamp_to_str(os.stat(profile).st_mtime)
yield (profile_contents['header']['type'],
profile_contents['collector_info']['name'],
profile_time)
def read_entry():
"""
:returns IndexEntry: one read index entry
"""
# Rather nasty hack, but nothing better comes to my mind currently
if index_handle.tell() + 24 >= last_position:
return ''
file_offset = index_handle.tell()
file_time = timestamps.timestamp_to_str(timestamps.read_timestamp_from_file(index_handle))
file_sha = binascii.hexlify(index_handle.read(20)).decode('utf-8')
file_path, byte = "", read_char_from_handle(index_handle)
while byte != '\0':
file_path += byte
byte = read_char_from_handle(index_handle)
return IndexEntry(file_time, file_sha, file_path, file_offset)
def _parse_commit(commit):
"""
:param git.Commit commit: commit object
:returns MinorVersion: namedtuple of minor version (date author email checksum desc parents)
"""
checksum = str(commit)
commit_parents = [str(parent) for parent in commit.parents]
commit_author_info = commit.author
author, email = commit_author_info.name, commit_author_info.email
timestamp = commit.committed_date
date = timestamps.timestamp_to_str(int(timestamp))
commit_description = str(commit.message)
return MinorVersion(date, author, email, checksum, commit_description,
commit_parents)
def successfully_added_profile_in(index_handle, valid_profile):
"""Helper assert that checks if the @p valid_profile was successfully added to index
Arguments:
index_handle(file): index handle of the corresponding minor version
valid_profile(str): name of the valid profile
"""
profile_timestamp = timestamps.timestamp_to_str(os.stat(valid_profile).st_mtime)
profile_name = os.path.split(valid_profile)[-1]
try:
profile_entry \
= store.lookup_entry_within_index(index_handle,
lambda entry: entry.path == profile_name)
assert profile_entry.path == profile_name
assert profile_entry.time == profile_timestamp
return True
# This sounds weird, but I want to use this function in asserts
except EntryNotFoundException:
return False
except AssertionError:
return False