'localCopy': {
'path': 'output/*',
'disk': 'datadisk'
}
} ]
},
'pipelineArgs' : {
'projectId': args.project,
# Override the resources needed for this pipeline
'resources' : {
'minimumRamGb': 1, # For this example, override the 3.75 GB default
# Expand any zone short-hand patterns
'zones': defaults.get_zones(args.zones),
# For the data disk, specify the type and size
'disks': [ {
'name': 'datadisk',
'autoDelete': True,
'sizeGb': args.disk_size,
} ]
},
# Pass the user-specified Cloud Storage paths as a map of input files
# 'inputs' : {
# 'inputFile0' : 'gs://bucket/foo.bam',
# 'inputFile1' : 'gs://bucket/bar.bam',
# <etc>
'name': 'outputPath',
'description': 'Cloud Storage path for where to FastQC output',
'localCopy': {
'path': 'workspace/*',
'disk': 'datadisk'
}
} ]
},
'pipelineArgs': {
'projectId': args.project,
# Override the resources needed for this pipeline
'resources': {
# Expand any zone short-hand patterns
'zones': defaults.get_zones(args.zones),
# For the data disk, specify the size
'disks': [ {
'name': 'datadisk',
'sizeGb': args.disk_size,
} ]
},
# Pass the user-specified Cloud Storage paths as a map of input files
# 'inputs': {
# 'inputFile0': 'gs://bucket/foo.bam',
# 'inputFile1': 'gs://bucket/bar.bam',
# <etc>
# }