Beispiel #1
0
def get_boxes_simplified(db_filename,
                         data_directory,
                         capture_ids,
                         label_type,
                         detection_type,
                         parent_type,
                         x_stride=db_export.x_stride_dft,
                         y_offset=db_export.y_offset_dft):
    '''
    Simple work flow for finding all the detected and labeled boxes
    given a data directory and database file.

    '''
    if detection_type is None:
        detection_type = label_type

    if capture_ids is not None:
        detection_capture_ids = capture_ids
        label_capture_ids = capture_ids
    else:
        detection_capture_ids = process_export.find_capture_ids(data_directory)

        label_capture_ids = None

    detected_boxes_dict = dict(
        process_export.detected_boxes(data_directory, detection_type,
                                      detection_capture_ids))

    detected_parent_boxes_dict = dict(
        process_export.detected_boxes(data_directory, parent_type,
                                      detection_capture_ids))

    if 1:
        if db_filename[-3:] == "txt":
            labeled_boxes_dict = boxes_from_txt(db_filename, label_type,
                                                label_capture_ids)
        else:
            labeled_boxes_dict = db_export.boxes_from_db(
                db_filename, label_type, x_stride, y_offset, label_capture_ids)

    # a development option to read clear_lables and all_labels
    if 0:
        labeled_boxes_dict = db_export.boxes_from_db(db_filename, 'all_plates',
                                                     x_stride, y_offset,
                                                     label_capture_ids)
        labeled_boxes_dict
        tmpdict = db_export.boxes_from_db(db_filename, 'clear_plates',
                                          x_stride, y_offset,
                                          label_capture_ids)

        for key in tmpdict:
            if key in labeled_boxes_dict:
                labeled_boxes_dict[key] += tmpdict[key]
            else:
                labeled_boxes_dict[key] = tmpdict[key]

    if capture_ids is None:
        reduce_to_intersection(detected_boxes_dict, labeled_boxes_dict)
    return detected_boxes_dict, detected_parent_boxes_dict, labeled_boxes_dict
def get_boxes_simplified(db_filename, data_directory, capture_ids,
                         label_type, detection_type, parent_type,
                         x_stride=db_export.x_stride_dft,
                         y_offset=db_export.y_offset_dft, scale=1):
    # Added "scale" as input parameter
    '''
    Simple work flow for finding all the detected and labeled boxes
    given a data directory and database file.

    '''
    '''
    Modified codes for loading "detected_boxes_dic", "labeled_boxes_dic" on 6/30 by tchen. 
    '''
    if detection_type is None:
        detection_type = label_type

    
    if capture_ids is not None:
        detection_capture_ids = capture_ids
        label_capture_ids = capture_ids
    else:
        detection_capture_ids = process_export.find_capture_ids(
                data_directory)
        label_capture_ids = None
    
    
    # Added load_detected_boxes function by tchen on 6/30 
    driveid = db_filename[-20:-4]
    detected_boxes_dict = load_detected_boxes(driveid, data_directory, scale)
    # detected_boxes_dict = dict(load_detected_boxes(driveid, data_directory)) 
    detected_parent_boxes_dict = detected_boxes_dict
    
    detected_boxes_dict = dict(process_export.detected_boxes(
            data_directory, detection_type,
            detection_capture_ids))
    '''
    detected_parent_boxes_dict = dict(process_export.detected_boxes(
            data_directory, parent_type,
            detection_capture_ids))
    '''
    if 1:
        if db_filename[-3:] == "txt":
            labeled_boxes_dict = boxes_from_txt(
                db_filename, label_type, label_capture_ids)
        else:
            labeled_boxes_dict = db_export.boxes_from_db(
                    db_filename, label_type,
                    x_stride, y_offset,
                    label_capture_ids)

    # a development option to read clear_lables and all_labels
    if 0:
        labeled_boxes_dict = db_export.boxes_from_db(
            db_filename, 'all_plates',
            x_stride, y_offset,
            label_capture_ids)
        labeled_boxes_dict
        tmpdict = db_export.boxes_from_db(
            db_filename, 'clear_plates',
            x_stride, y_offset,
            label_capture_ids)

        for key in tmpdict:
            if key in labeled_boxes_dict:
                labeled_boxes_dict[key] += tmpdict[key]
            else:
                labeled_boxes_dict[key] =  tmpdict[key]
    '''
    if capture_ids is None:
        reduce_to_intersection(detected_exiboxes_dict,
                              lasbeled_boxes_dict)
    '''
    
    return detected_boxes_dict,detected_parent_boxes_dict, labeled_boxes_dict
def get_boxes_simplified(db_filename,
                         data_directory,
                         capture_ids,
                         label_type,
                         detection_type,
                         parent_type,
                         x_stride=db_export.x_stride_dft,
                         y_offset=db_export.y_offset_dft,
                         scale=1):
    # Added "scale" as input parameter
    '''
    Simple work flow for finding all the detected and labeled boxes
    given a data directory and database file.

    '''
    '''
    Modified codes for loading "detected_boxes_dic", "labeled_boxes_dic" on 6/30 by tchen. 
    '''
    if detection_type is None:
        detection_type = label_type

    if capture_ids is not None:
        detection_capture_ids = capture_ids
        label_capture_ids = capture_ids
    else:
        detection_capture_ids = process_export.find_capture_ids(data_directory)
        label_capture_ids = None

    # Added load_detected_boxes function by tchen on 6/30
    driveid = db_filename[-20:-4]
    detected_boxes_dict = load_detected_boxes(driveid, data_directory, scale)
    # detected_boxes_dict = dict(load_detected_boxes(driveid, data_directory))
    detected_parent_boxes_dict = detected_boxes_dict

    detected_boxes_dict = dict(
        process_export.detected_boxes(data_directory, detection_type,
                                      detection_capture_ids))
    '''
    detected_parent_boxes_dict = dict(process_export.detected_boxes(
            data_directory, parent_type,
            detection_capture_ids))
    '''
    if 1:
        if db_filename[-3:] == "txt":
            labeled_boxes_dict = boxes_from_txt(db_filename, label_type,
                                                label_capture_ids)
        else:
            labeled_boxes_dict = db_export.boxes_from_db(
                db_filename, label_type, x_stride, y_offset, label_capture_ids)

    # a development option to read clear_lables and all_labels
    if 0:
        labeled_boxes_dict = db_export.boxes_from_db(db_filename, 'all_plates',
                                                     x_stride, y_offset,
                                                     label_capture_ids)
        labeled_boxes_dict
        tmpdict = db_export.boxes_from_db(db_filename, 'clear_plates',
                                          x_stride, y_offset,
                                          label_capture_ids)

        for key in tmpdict:
            if key in labeled_boxes_dict:
                labeled_boxes_dict[key] += tmpdict[key]
            else:
                labeled_boxes_dict[key] = tmpdict[key]
    '''
    if capture_ids is None:
        reduce_to_intersection(detected_exiboxes_dict,
                              lasbeled_boxes_dict)
    '''

    return detected_boxes_dict, detected_parent_boxes_dict, labeled_boxes_dict
def get_boxes_simplified(db_filename, data_directory, capture_ids,
                         label_type, detection_type, parent_type,
                         x_stride=db_export.x_stride_dft,
                         y_offset=db_export.y_offset_dft):
    '''
    Simple work flow for finding all the detected and labeled boxes
    given a data directory and database file.

    '''
    if detection_type is None:
        detection_type = label_type

    if capture_ids is not None:
        detection_capture_ids = capture_ids
        label_capture_ids = capture_ids
    else:
        detection_capture_ids = process_export.find_capture_ids(
                data_directory)

        label_capture_ids = None

    detected_boxes_dict = dict(process_export.detected_boxes(
            data_directory, detection_type,
            detection_capture_ids))

    detected_parent_boxes_dict = dict(process_export.detected_boxes(
            data_directory, parent_type,
            detection_capture_ids))

    if 1:
        if db_filename[-3:] == "txt":
            labeled_boxes_dict = boxes_from_txt(
                db_filename, label_type, label_capture_ids)
        else:
            labeled_boxes_dict = db_export.boxes_from_db(
                    db_filename, label_type,
                    x_stride, y_offset,
                    label_capture_ids)

    # a development option to read clear_lables and all_labels
    if 0:
        labeled_boxes_dict = db_export.boxes_from_db(
            db_filename, 'all_plates',
            x_stride, y_offset,
            label_capture_ids)
        labeled_boxes_dict
        tmpdict = db_export.boxes_from_db(
            db_filename, 'clear_plates',
            x_stride, y_offset,
            label_capture_ids)

        for key in tmpdict:
            if key in labeled_boxes_dict:
                labeled_boxes_dict[key] += tmpdict[key]
            else:
                labeled_boxes_dict[key] =  tmpdict[key]

    if capture_ids is None:
        reduce_to_intersection(detected_boxes_dict,
                              labeled_boxes_dict)
    return detected_boxes_dict,detected_parent_boxes_dict, labeled_boxes_dict