Beispiel #1
0
def test_simulate():
    tmpdir = tempfile.mkdtemp(prefix='psweep_test_simulate_')
    params = [{'a': 1}, {'a': 2}, {'a': 3}, {'a': 4}]
    params_sim = [{'a': 88}, {'a': 99}]
    calc_dir = "{}/calc".format(tmpdir)
    calc_dir_sim = calc_dir + '.simulate'

    df = ps.run(func, params, calc_dir=calc_dir)
    df_sim = ps.run(func, params_sim, calc_dir=calc_dir, simulate=True)
    dbfn = "{}/results.pk".format(calc_dir)
    dbfn_sim = "{}/results.pk".format(calc_dir_sim)

    assert len(df_sim) == 6
    assert len(df) == 4
    assert os.path.exists(dbfn)
    assert os.path.exists(dbfn_sim)
    assert df.equals(ps.df_read(dbfn))
    assert df_sim.equals(ps.df_read(dbfn_sim))

    assert df.iloc[:4].equals(df_sim.iloc[:4])
    assert np.isnan(df_sim.result.values[-2:]).all()

    df2 = ps.run(func, params_sim, calc_dir=calc_dir)
    assert len(df2) == 6
    assert df.iloc[:4].equals(df2.iloc[:4])
    assert (df2.result.values[-2:] == np.array([880.0, 990.0])).all()

    shutil.rmtree(tmpdir)
Beispiel #2
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def test_run():
    tmpdir = tempfile.mkdtemp(prefix='psweep_test_run_')
    params = [{'a': 1}, {'a': 2}, {'a': 3}, {'a': 4}]
    calc_dir = "{}/calc".format(tmpdir)

    # run two times, updating the database, the second time,
    # also write tmp results
    df = ps.run(func, params, calc_dir=calc_dir)
    assert len(df) == 4
    assert len(df._run_id.unique()) == 1
    assert len(df._pset_id.unique()) == 4
    df = ps.run(func, params, calc_dir=calc_dir, poolsize=2, tmpsave=True)
    assert len(df) == 8
    assert len(df._run_id.unique()) == 2
    assert len(df._pset_id.unique()) == 8
    assert set(df.columns) == \
        set(['_calc_dir', '_pset_id', '_run_id', '_time_utc', 'a', 'result'])

    dbfn = "{}/results.pk".format(calc_dir)
    assert os.path.exists(dbfn)
    assert df.equals(ps.df_read(dbfn))

    # tmp results of second run
    run_id = df._run_id.unique()[-1]
    for pset_id in df[df._run_id == run_id]._pset_id:
        tmpsave_fn = "{calc_dir}/tmpsave/{run_id}/{pset_id}.pk".format(
            calc_dir=calc_dir, run_id=run_id, pset_id=pset_id)
        assert os.path.exists(tmpsave_fn)
    shutil.rmtree(tmpdir)
Beispiel #3
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def test_save():
    tmpdir = tempfile.mkdtemp(prefix='psweep_test_run_')
    params = [{'a': 1}, {'a': 2}, {'a': 3}, {'a': 4}]
    calc_dir = "{}/calc".format(tmpdir)
    dbfn = "{}/results.pk".format(calc_dir)

    df = ps.run(func, params, calc_dir=calc_dir, save=False)
    assert not os.path.exists(dbfn)
    assert os.listdir(tmpdir) == []

    df = ps.run(func, params, calc_dir=calc_dir, save=True)
    assert os.path.exists(dbfn)
    assert os.listdir(tmpdir) != []
    shutil.rmtree(tmpdir)
Beispiel #4
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def test_backup():
    def func(pset):
        # write stuff to calc_dir
        dr = pj(pset['_calc_dir'], pset['_pset_id'])
        ps.makedirs(dr)
        fn = pj(dr, 'foo')
        with open(fn, 'w') as fd:
            fd.write("bar")
        return ps.merge_dicts(pset, {'result': pset['a'] * 10})

    tmpdir = tempfile.mkdtemp(prefix='psweep_test_run_')
    params = [{'a': 1}, {'a': 2}, {'a': 3}, {'a': 4}]
    calc_dir = "{}/calc".format(tmpdir)

    # First run. backup_calc_dir does nothing yet. Test backup_script.
    df = ps.run(func,
                params,
                calc_dir=calc_dir,
                backup_script=__file__,
                backup_calc_dir=True)
    run_id = df._run_id.unique()[-1]
    script_fn = "{}/backup_script/{}.py".format(calc_dir, run_id)
    assert os.path.exists(script_fn)
    with open(script_fn) as fd1, open(__file__) as fd2:
        assert fd1.read() == fd2.read()
    df1 = df.copy()

    # Second run. This time, test backup_calc_dir.
    df = ps.run(func, params, calc_dir=calc_dir, backup_calc_dir=True)
    rex = re.compile(r"calc_[0-9-]+T[0-9:\.]+Z")
    found = False
    for name in os.listdir(tmpdir):
        if rex.search(name) is not None:
            backup_dir = pj(tmpdir, name)
            found = True
            break
    assert found
    print(os.listdir(backup_dir))
    for pset_id in df1[df1._run_id == run_id]._pset_id:
        tgt = pj(backup_dir, pset_id, 'foo')
        assert os.path.exists(tgt)
    assert os.path.exists(pj(backup_dir, 'results.pk'))
    assert os.path.exists("{}/backup_script/{}.py".format(backup_dir, run_id))
Beispiel #5
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def test_scripts():
    tmpdir = tempfile.mkdtemp(prefix='psweep_test_bin_')
    params = [{'a': 1}, {'a': 2}, {'a': 3}, {'a': 4}]
    calc_dir = "{}/calc".format(tmpdir)
    df = ps.run(func, params, calc_dir=calc_dir)

    bindir = ps.fullpath(pj(os.path.dirname(__file__), '../../bin'))
    db = pj(calc_dir, 'results.pk')
    print(system("{}/psweepdb2json.py -o columns {}".format(bindir, db)))
    print(system("{}/psweepdb2table.py -i -a -f simple {}".format(bindir, db)))
    shutil.rmtree(tmpdir)
#!/usr/bin/env python3

import random
import multiprocessing as mp
from psweep import psweep as ps


def func(pset):
    print(mp.current_process().name)
    return {'result': random.random() * pset['a']}


if __name__ == '__main__':
    params = ps.seq2dicts('a', [1, 2, 3, 4, 5, 6, 7, 8])
    df = ps.run(func, params, poolsize=2)
    print(df)
Beispiel #7
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#!/usr/bin/env python3

import random
from psweep import psweep as ps


def func(pset):
    return {'result': random.random() * pset['a']}


if __name__ == '__main__':
    params = ps.seq2dicts('a', [1, 2, 3, 4])
    df = ps.run(func, params)
    print(df)
    return {'result': random.random() * pset['a'] * pset['b']}


if __name__ == '__main__':

    print("first run")

    const = {'a': 11111, 'b': 55555}

    params = []
    disp_cols = []

    values = dict(a=[1, 2, 3], b=[66, 77])

    for study, seq in values.items():
        # [{'a': 1}, {'a': 2}, {'a': 3}]
        # [{'b': 66}, {'b': 77}]
        params_1d = ps.seq2dicts(study, seq)
        this_params = ps.loops2params(product(params_1d, [{'study': study}]))
        this_params = [ps.merge_dicts(const, dct) for dct in this_params]
        params += this_params
        disp_cols.append(study)

    disp_cols += ['_run_id']
    df = ps.run(func,
                params,
                backup_script=__file__,
                backup_calc_dir=True,
                verbose=disp_cols)
    print(df[disp_cols + ['result']])
Beispiel #9
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#!/usr/bin/env python3

import random
from itertools import product
from psweep import psweep as ps


def func(pset):
    return {'result': random.random() * pset['a'] * pset['b']}


if __name__ == '__main__':
    sel = ['_calc_dir', 'a', 'b', 'result']

    # 1st real run: produce some data, vary a, b constant
    params = ps.loops2params(
        product(ps.seq2dicts('a', [1, 2, 3, 4]), ps.seq2dicts('b', [100])))
    df = ps.run(func, params)
    print(df[sel])

    # simulate run: check if new parameter grid is OK
    params = ps.loops2params(
        product(ps.seq2dicts('a', [5, 6]), ps.seq2dicts('b', [88, 99])))
    df = ps.run(func, params, simulate=True)
    print(df[sel])

    # looks good, 2nd real run with new params
    df = ps.run(func, params)
    print(df[sel])
Beispiel #10
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        style_scales=np.concatenate(
            (np.linspace(0.1, 1, 19), np.linspace(1.1, 3, 30))),
        content_weight_blend=np.linspace(0, 1, 30),
        style_weight=np.linspace(0, 200, 50),
        tv_weight=np.linspace(0, 600, 50),
        style_layer_weight_exp=np.concatenate(
            (np.linspace(0, 1.3, 15), np.linspace(1.33, 20, 20))),
    )

    params = []
    disp_cols = []

    for study, seq_1d in vary.items():
        params_1d = ps.seq2dicts(study, seq_1d)
        this_params = ps.loops2params(product(params_1d, [{'study': study}]))
        this_params = [ps.merge_dicts(const, dct) for dct in this_params]
        params += this_params
        disp_cols.append(study)

    pd.options.display.max_rows = None
    pd.options.display.max_columns = None

    df = ps.run(gpu_worker,
                params,
                poolsize=4,
                simulate=False,
                verbose=disp_cols + ['study'],
                tmpsave=False,
                backup_script=__file__,
                backup_calc_dir=True)