def main():
#-----------Setting up and unsing option parser-----------------------
parser=OptionParser(usage= usage, version=version)
logger=logging.getLogger("exportToEMEP.py")
parser.add_option("-l", "--loglevel",
action="store",dest="loglevel",default=2,
help="Sets the loglevel (0-3 where 3=full logging)")
parser.add_option("-u", "--user",
action="store", dest="user", default=None,
help="Specify user manually")
parser.add_option("-e", "--edb",
action="store", dest="edb", default=None,
help="Name of target edb")
parser.add_option("-t", "--template",
action="store",dest="cf",default=None,
help="Generate default controlfile")
parser.add_option("-f", "--force",
action="store_true",dest="force",default=False,
help="To start the process without confirming the domain")
(options, args) = parser.parse_args()
#------------Setting up logging capabilities -----------
rootLogger=logger.RootLogger(int(options.loglevel))
log=rootLogger.getLogger(sys.argv[0])
if options.cf!=None:
generateCf(path.abspath(options.cf))
log.info("Wrote default controlfile")
sys.exit()
if len(args)!=1:
parser.error("Incorrect number of arguments")
domainName=os.environ["AVDBNAME"]
dmn = domain.Domain(domainName)
if options.edb ==None:
parser.error("Need to specify edb using flag -e")
if options.user ==None:
parser.error("Need to specify user using flag -u")
if not options.force:
answer=raw_input("Chosen dbase is: "+domainName+", continue(y/n)?")
if answer=="y":
dmn=domain.Domain()
else:
sys.exit("Interrupted by user")
if not dmn.edbExistForUser(options.edb,options.user):
log.error("Edb "+options.edb+" does not exist for user "+options.user+" in domain "+domainName)
sys.exit()
edb=Edb(dmn.name,options.user,options.edb)
rsrc=rsrc.Rsrc(edb.rsrcPath())
#Opening controlfile
cf=controlfile.ControlFile(fileName=path.abspath(args[0]))
substances=cf.findStringList("substances:")
outputDir=cf.findExistingPath("outputDir:")
acIndex=cf.findInt("acIndex:")
#Get activity code tree
codes=codetable.CodeTable(edb.rsrcPath(),acIndex=acIndex)
datadb=datadb.Datadb(dmn,options.user,edb.name)
datadb.read()
substDict=dmn.listSubstanceIndices()
#List grid names
gridNames=edb.listGrids()
for ac in codes.ac:
if ac=="all":
continue
pdb.set_trace()
log.debug("Activity code: "+ac)
dataMarker = emepgrid.emepRaster()
rasterDict={}
substancesWithData=[]
#Rereads grid list for each category to not fill the memory with emission grids
#Grid data is only read for grids with current ac
gridList=[]
for gridName in gridNames:
grd=Egrid(dmn.name,options.user,edb.name,gridName)
grd.readAsc()
if grd.hasFuel():
log.warning("Only support for non-fuel grids implemented, no processing done for grid "+gridName)
break
gridList.append(grd)
for subst in substances:
log.debug("Substance: "+subst)
substInd=substDict[subst]
totEmisRast=raster.Raster(Xll=1190000,Yll=6110000,Ncols=720,Nrows=1560,Cellsize=1000,init=0)
for grd in gridList:
if grd.par["ACTIVITYCODE"].val[0]==ac:
if len(grd.substances)==0:
grd.readData()
totEmisRast=totEmisRast+grd.substances.get(substInd,0)
for src in datadb.sources:
if src.par["ACTIVITYCODE"].val[0]==ac:
row,col=totEmisRast.getIndex(src.par["X1"].val,src.par["Y1"].val)
totEmisRast.data[row,col]+=src.getEmis(substInd,rsrc,"ton/year")
pdb.set_trace()
if not totEmisRast.sum()==0:
if subst not in substancesWithData:
substancesWithData.append(subst)
__RT90__="+proj=tmerc +lat_0=0 +lon_0=15d48\\'29.8\\\" +x_0=1500000 +k_0=1 +ellps=bessel +towgs84=414.1,41.3,603.1,-0.855,2.141,-7.023,0"
emepRast = emepgrid.sortToEmep(totEmisRast,__RT90__,printInfo=True)
dataMarker.data = numpy.where(emepRast.data > 0, 1, dataMarker.data)
rasterDict[subst]=emepRast
categoryDirPath = path.join(outputDir, ac)
if not path.isdir(categoryDirPath):
os.mkdir(categoryDirPath)
fileName = path.join(categoryDirPath, "Emep50km_" + subst+ ".asc")
emepRast.write(fileName)
log.info("Emissions in EMEP-projection for substance: " + subst + "written to outputDir for category: " + ac)
if len(rasterDict)>0:
#creating substance header in the same order as the substances in the template
header = "i\tj\t"
#headerList=["SO2","NOx","NH3","NMVOC","CO","TSP","PM10","PM25","Pb ","Cd","Hg","As","Cr","Cu","Ni","Se","Zn","Aldrin","Chlordane","Chlordecone","Dieldrin","Endrin","Heptachlor","Hexabromobiphenyl","Mirex","Toxaphene","HCH","DDT","PCB","DIOX","PAH","HCB","PCP","SCCP"]
for s in substancesWithData:
header += s + "\t"
#remove the tab after the last column and add a newline instead
header = header[: - 1]+ "\n"
#Creating file for EMEP-data
fileName = "CLRTAP_" + ac + ".txt"
categoryDirPath = path.join(outputDir, ac)
if not path.isdir(categoryDirPath):
os.mkdir(categoryDirPath)
fid = open(path.join(categoryDirPath, fileName), 'w')
fid.writelines(header)
#Writing indexes and data for all non-zero elements
for row in range(dataMarker.nrows):
for col in range(dataMarker.ncols):
if dataMarker.data[row, col] > 0:
(i, j) = dataMarker.getCentreCoords(row, col)
fid.write(str(i) + "\t" + str(j) + "\t")
for substWithData in substancesWithData[:-1]:
fid.write(str(rasterDict[substWithData].data[row, col]) + "\t")
fid.write(str(rasterDict[substancesWithData[-1]].data[row, col]) + "\n")
fid.close()
log.info("wrote emissions to clrtap-file: " + path.join(categoryDirPath, fileName))
log.info("Finished")
def extractByGeocode(argDict):
"""Extracts sources by geocode and saves to edb's for other users specified
in a file with users, and optionally edb's, specified for each geocode"""
edb = argDict["edb"]
mapping = argDict["edbMapping"]
codeLevel = argDict["codeLevel"]
codeIndex = argDict["codeIndex"]
# Processing grid sources
for grd in argDict["grids"]:
if not match(grd.par["NAME"].val, argDict["filters"]):
continue
# dict with (user,edb) as key and a list of gc to be included as value
subEdbs = {}
allFound = True
for gc in mapping:
# The mapping can contain only users for each geocode, in that case
# The users are stored as values and the original edb name is used
# as default
# If both user and edb name is given, the values are given in a
# list for each gc
if isinstance(mapping[gc], list):
tmp_user = mapping[gc][0]
tmp_edb = mapping[gc][1]
else:
tmp_user = mapping[gc]
tmp_edb = edb.name
subEdb = Edb(argDict["domain"], tmp_user, tmp_edb)
if (tmp_user, tmp_edb) in subEdbs:
subEdbs[(tmp_user, tmp_edb)].append(gc)
else:
subEdbs[(tmp_user, tmp_edb)] = [gc]
# Check if edb exist, and if so if grid exist
# (to save time when updating)
if subEdb.exists():
if grd.name not in subEdb.listGrids():
allFound = False
continue
else:
allFound = False
if allFound:
log.info(
"Splitted grid " +
"%s already exist for all" % grd.name +
" geocodes, remove to update")
continue
log.debug("Reading grid: %s" % grd.name)
grd.readData()
for user_edb, gcList in subEdbs.iteritems():
subEdb = Edb(argDict["domain"], user_edb[0], user_edb[1])
subEdb.rsrc = edb.rsrc
# extract data from grid that maches any of the geocodes in gcList
subGrid = grd.sliceByGeoCode(
codeLevel - 1,
map(int, gcList),
subEdb
)
if subGrid is not None:
if not subEdb.exists():
subEdb.create(edbRsrc=edb.rsrcPath())
log.debug("Created edb for user %s" % subEdb.user)
log.debug(
"Writing grid: %s to edb %s for user %s" % (
grd.name,
subEdb.name,
subEdb.user)
)
subGrid.load()
if argDict["sources"] is not None:
sub_source_writers = {}
# subCompanydbs = {}
# subFacilitydbs = {}
# Read substance groups
subgrpdb = Subgrpdb(edb)
subgrpdb.read()
facilitydb = Facilitydb(edb)
facilitydb.read()
companydb = Companydb(edb)
companydb.read()
for src in argDict["sources"]:
if not match(src.NAME, argDict["filters"]):
continue
# gc = int(src.GEOCODE[codeIndex - 1][codeLevel - 1])
gc = int(src.GEOCODE[codeIndex - 1].split(".")[codeLevel - 1])
if src.PX is not None and src.PX != 0:
facility = facilitydb.index[(src.PX, src.PY)]
company = companydb.index[facility["COMPANY"]]
# If no mapping is provided for a gc it is ignored
if gc not in mapping:
continue
# create sub-edb and corresponding db:s
if gc not in sub_source_writers:
tmp_user = mapping[gc]
subEdb = Edb(argDict["domain"], tmp_user, edb.name)
# If a sub-edb does not exist,
# create a new one with edb.rsrc from original edb
if not subEdb.exists():
subEdb.create(edbRsrc=edb.rsrcPath())
sub_source_writers[gc] = ModelWriter(
SourceStream(subEdb, mode='w')
)
# subCompanydbs[gc] = Companydb(subEdb)
# subFacilitydbs[gc] = Facilitydb(subEdb)
# Write substance groups to subEdb
subgrpdb.setEdb(subEdb)
log.info("Writing subgrpdb for user %s" % subEdb.user)
subgrpdb.write()
# subCompanydbs[gc].append(company, force=True)
# subFacilitydbs[gc].append(facility,force=True)
sub_source_writers[gc].write(src)
# write all sources
for gc in sub_source_writers:
# log.info("Writing companies to edb for gc %i" % gc)
# subCompanydbs[gc].write()
# log.info("Writing facilities to edb for gc %i" % gc)
# subFacilitydbs[gc].write()
log.info("Writing sources to edb for gc %i" % gc)
return argDict
def main():
actionList = [
'addSubstance',
'removeSubstance',
'mapSubstances',
'addCodeTree',
'removeCodeTree',
'moveCodeTree',
'extractByGeocode',
'uniteGrids',
'scale'
]
# setting up parser
parser = argparse.ArgumentParser(
description=__doc__,
formatter_class=argparse.ArgumentDefaultsHelpFormatter
)
utils.add_standard_command_options(parser)
parser.add_argument("-d", "--doc",
action="store_true", dest="doc",
help="Prints more detailed documentation and exit")
parser.add_argument("-u", "--user",
action="store", dest="user", default=None,
help="Specify user manually")
parser.add_argument("-e", "--edb",
action="store", dest="edb", default=None,
help="Name of target edb")
parser.add_argument("-s", "--substance", action="store",
dest="substance",
help="Name of substance to add or remove")
parser.add_argument("--substanceFactorFile", action="store",
dest="substanceFactorFile",
help="File with substance factors")
parser.add_argument("--substanceMapping", action="store",
dest="substanceMapping",
help="File with mapping for substance indices")
parser.add_argument("--codeMapping", action="store",
dest="codeMapping",
help="File with mapping from old codes to new")
parser.add_argument("--edbMapping", action="store",
dest="edbMapping",
help="File with mapping from gc to edb")
parser.add_argument("-f", "--force",
action="store_true", dest="force", default=False,
help="Start the process without confirming the domain")
parser.add_argument("--factor",
action="store", type=float, dest="factor",
help="Factor used to scale emissions")
parser.add_argument(
"-n", "--names", action="store",
dest="sourceNames", default=['.*'],
nargs='*',
help="Space separated list of regular expressions"
)
parser.add_argument(
"--sourceTypes", action="store",
dest="sourceTypes",
nargs='*',
default=['griddb', 'sources'],
choices=["griddb", "sources", "subgrpdb", "svehdb", "vehdb"],
help="Source types to process"
)
parser.add_argument(
"--codeType", action="store",
dest="codeType", default='ac',
help="Code type to process"
)
parser.add_argument(
"--codeIndex", action="store",
dest="codeIndex", default=1, type=int,
help="Index of code tree to use in processing"
)
parser.add_argument(
"--newIndex", action="store",
dest="newIndex", default=None,
help="New index when moving an already defined code tree"
)
parser.add_argument(
"--codeLevel", action="store",
dest="codeLevel", default=1, type=int,
help="Level of code tree to use in processing")
parser.add_argument(
"--actions", action="store",
dest="actions",
nargs='*',
choices=actionList,
help="Action list"
)
args = parser.parse_args()
if args.doc:
print doc
sys.exit()
# if len(args) > 0:
# log.error("Incorrect number of arguments")
# sys.exit(1)
if args.edb is None:
log.error("Need to specify edb")
sys.exit(1)
if args.user is None:
log.error("Need to specify user")
sys.exit(1)
dmn = Domain()
edb = Edb(dmn, args.user, args.edb)
subdb = Subdb(edb)
subdb.read()
rsrc = Rsrc(edb.rsrcPath())
# Check if edb exist
if not edb.exists():
log.error("Edb " + args.edb + " does not exist for user " +
args.user + " in domain " + dmn.name)
sys.exit(1)
if args.codeType.lower() == "ac":
codeType = "ACTIVITYCODE"
elif args.codeType.lower() == "gc":
codeType = "GEOCODE"
else:
parser.error("codeType should be either 'gc' or 'ac'")
if args.codeIndex < 1:
raise ValueError("Minimum code index is 1")
if args.codeIndex > 1 and codeType == "gc":
raise OSError("Multiple geocode trees not implemented")
for a in args.actions:
if a not in actionList:
parser.error("Unknown action %s" % a)
log.info("User: "******"Edb: " + args.edb)
loadGridData = False
# Set values in argsDict
argDict = {
"edb": edb,
"user": args.user,
"domain": dmn,
"grids": [],
"filters": args.sourceNames,
"codeType": codeType,
"codeIndex": args.codeIndex,
"codeLevel": args.codeLevel,
"sources": None,
"griddb": None,
"subgrpdb": None,
"roaddb": None,
"vehdb": None,
"svehdb": None,
"rsrc": rsrc
}
# ----- Reading sources from edb -------------------------------
if 'griddb' in args.sourceTypes:
grids = []
gridNames = edb.listGrids()
for name in gridNames:
grd = egrid.Egrid(edb, name)
grd.readAsc()
grids.append(grd)
argDict["grids"] = grids
if 'sources' in args.sourceTypes:
argDict["sources"] = list(ModelReader(SourceStream(edb, mode='r')))
if 'roaddb' in args.sourceTypes:
log.error("Not implemented with new roaddb-structure")
sys.exit(1)
if 'subgrpdb' in args.sourceTypes:
subgrpdb = Subgrpdb(edb)
subgrpdb.read()
argDict["subgrpdb"] = subgrpdb
# emfacdbdb = Emfacdb(edb)
# emfacdb.read()
# argDict["subgrpdb"] = subgrpdb
if 'svehdb' in args.sourceTypes:
svehdb = Svehdb(edb)
svehdb.read()
argDict["svehdb"] = svehdb
# TODO: add option for vehdb
# parse additional args
# -----addSubstance--------------------------------------
if "addSubstance" in args.actions:
if args.substance is None:
parser.error("Action addSubstance needs" +
"--substance to be specified")
if args.substanceFactorFile is None:
parser.error("Option addSubstance also needs" +
"--substanceFactorFile to be specified")
if args.substance not in subdb.substIndices:
raise ValueError(
"Substance %s not in substance list" % args.substance)
substanceNameFactorDict = parseMapping(
path.abspath(args.substanceFactorFile),
valueType=float)
substanceFactorDict = {}
# Converts mapping between substance name and factor to
# mapping between substance index and factor
for name, factor in substanceNameFactorDict.iteritems():
if name not in subdb.substIndices:
raise KeyError(
"Substance : %s not found in substance list" % name
)
ind = subdb.substIndices[name]
substanceFactorDict[ind] = factor
argDict["substanceFactorDict"] = substanceFactorDict
argDict["substance"] = subdb.substIndices[args.substance]
# ----removeSubstance------------------------------------
if "removeSubstance" in args.actions:
if args.substance is None:
parser.error("Action removeSubstance needs" +
"--substance to be specified")
if args.substance not in subdb.substIndices:
log.error("Substance %s not in substance list" % args.substance)
sys.exit(1)
argDict["substance"] = subdb.substIndices[args.substance]
# ----mapSubstances--------------------------------------
if "mapSubstances" in args.actions:
if args.substanceMapping is None:
parser.error("Action mapSubstances needs" +
"--substanceMapping to be specified")
substanceMappingFile = path.abspath(args.substanceMapping)
substanceMapping = parseMapping(
substanceMappingFile,
keyType=int,
valueType=int
)
argDict["substanceMapping"] = substanceMapping
# ----addCodeTree-----------------------------------------
if "addCodeTree" in args.actions:
if args.codeMapping is None:
parser.error("Action addCodeTree needs" +
"--codeMapping to be specified")
if args.newIndex is None:
parser.error("Action addCodeTree needs" +
"--newIndex to be specified")
codeMappingFile = path.abspath(args.codeMapping)
codeMapping = parseMapping(codeMappingFile)
argDict["codeMapping"] = codeMapping
argDict["newIndex"] = int(args.newIndex)
# ----removeCodeTree-------------------------------------
# Only arguments with default values needed, no validation is needed
# ----moveCodeTree---------------------------------------
if "moveCodeTree" in args.actions:
if args.newIndex is None:
parser.error("Action moveCodeTree needs" +
"--newIndex to be specified")
try:
argDict["newIndex"] = int(args.newIndex)
except ValueError:
log.error("newIndex must be an integer value")
sys.exit(1)
# ----extractByGeocode-----------------------------------
if "extractByGeocode" in args.actions:
if args.edbMapping is None:
parser.error("Action extractByGeocode needs" +
"--edbMapping to be specified")
log.info("Slicing edb by geocode")
edbMappingFile = path.abspath(args.edbMapping)
# Geocode has to be int
edbMapping = parseMapping(edbMappingFile, keyType=int)
argDict["edbMapping"] = edbMapping
if 'scale' in args.actions:
argDict['substance'] = subdb.substIndices[args.substance]
argDict['factor'] = args.factor
if args.factor is None:
log.error("Must specify --factor")
sys.exit(1)
if args.substance is None:
log.error("Must specify --substance")
sys.exit(1)
# Processing actions
for action in args.actions:
log.info("Running action: %s" % action)
argDict = eval(action)(argDict)
# Writes each processed grid to edb
if loadGridData:
for grd in argDict["grids"]:
if not match(grd["NAME"], argDict["filters"]) or grd.hasSubgrp():
continue
else:
log.debug(
"Wrote grid %s to edb: %s, user: %s" % (
grd.par["NAME"].val, grd.edb.name, grd.user)
)
grd.load()
else:
for grd in argDict["grids"]:
if not match(grd["NAME"], argDict["filters"]) or grd.hasSubgrp():
continue
else:
log.debug(
"Wrote .asc-file for grid %s to edb: %s, user: %s" % (
grd.par["NAME"].val, grd.edb.name, grd.user)
)
grd.writeAsc(grd.getAscPath())
# Writes each processed database to edb
if argDict["sources"] is not None:
with SourceStream(edb, mode="w") as stream:
model_writer = ModelWriter(stream)
for src in argDict["sources"]:
log.debug('Wrote source %s' % src.NAME)
model_writer.write(src)
for dbName in ["roaddb", "subgrpdb", "svehdb", "vehdb"]:
if argDict[dbName] is not None:
argDict[dbName].write()
log.info(
"Wrote %s to edb: %s, user: %s" % (
dbName, edb.name, edb.user)
)
def main():
# Parse command line arguments
parser = argparse.ArgumentParser(description=__doc__)
utils.add_standard_command_options(parser)
parser.add_argument("controlfile", metavar='CONTROLFILE',
action="store",
help="Controlfile for topdown processing")
parser.add_argument("-t", "--template", metavar='TEMPLATEFILE',
action="store",dest="cf",default=None,
help="Generate default controlfile")
args = parser.parse_args()
if args.cf is not None:
generateCf(args.cf)
log.info("Wrote default controlfile")
sys.exit(0)
log.info("Starting topdown processing")
# Opening controlfile
cf = ControlFile(args.controlfile)
dmn = Domain()
log.info("Reading topdown table")
tdTableName = cf.findExistingPath("topDownTable:")
tdTable = DataTable()
tdTable.keys.append("Code")
tdTable.read(tdTableName,delimiter=";")
log.info("Reading national totals table")
natTotalTableName = cf.findExistingPath("nationalTotalTable:")
natTable = DataTable(desc=[{"id": "Code", "type":unicode},
{"id": "description", "type":unicode}])
natTable.keys.append("Code")
natTable.read(natTotalTableName, units=True, defaultType=str)
notationKeys = ["NE", "NO", "NA", "IE"]
log.debug("Remove notation keys from national totals table")
for row in natTable.data:
for i in range(len(row)):
if row[i] in notationKeys:
row[i] = None
log.debug("Convert all emission columns in national totals to float")
for colId in natTable.listIds():
if colId not in ["Code","description"]:
natTable.convertCol(colId,float)
log.debug("Store units from national totals for each substance in dict")
natUnits={}
for col in natTable.desc:
if col.get("units",None)!=None:
natUnits[col["id"]]=col["units"]
log.debug("Read remaining data from control file")
bottomupEdbName = cf.findString("bottomUpEdb:")
topDownEdbName = cf.findString("topDownEdb:")
emissionsEdbName = cf.findString("emissionsEdb:")
userName = cf.findString("user:"******"year:")
#initialize edb objects
buEdb = Edb(dmn,userName,bottomupEdbName)
tdEdb = Edb(dmn,userName,topDownEdbName)
eEdb = Edb(dmn,userName,emissionsEdbName)
log.info("Reading/preparing EDB:s")
log.info("Reading subdb")
subdb = Subdb(eEdb)
subdb.read()
log.info("Reading subgrpdb")
subgrpdb = SubgrpStream(buEdb)
subgrpdb.read()
log.info("Reading facilitydb")
facilityIn = FacilityStream(buEdb)
log.info("Reading companydb")
companyIn = CompanyStream(buEdb)
facilityOut = FacilityStream(eEdb,mode="w")
companyOut = CompanyStream(eEdb,mode="w")
log.info("Writing company db to result edb")
companyOut.write(companyIn.read())
log.info("Writing facility db to result edb")
facilityOut.write(facilityIn.read())
if not buEdb.exists():
log.error("Edb " + buEdb.name + " does not exist for user " + userName +
" in domain " + dmn.name)
sys.exit(1)
if not tdEdb.exists():
log.error("Edb " + tdEdb.name + " does not exist for user " + userName +
" in domain " + dmn.name)
sys.exit(1)
if not eEdb.exists():
log.error("Edb " + eEdb.name + " does not exist for user " + userName +
" in domain " + dmn.name)
sys.exit(1)
keys = tdEdb.listGrids()
msg = "%i keys found in edb: %s" % (len(keys), tdEdb.name)
log.info(msg)
# sourcedb from bottom-up edb
with SourceStream(buEdb, mode='rb') as source_instream:
source_reader = ModelReader(source_instream)
bu_sources = list(source_reader)
log.info(
"%i point sources found in edb: %s" % (
len(bu_sources),
buEdb.name)
)
# Empty sourcedb of the result edb
if cf.findBoolean("emptyEmissionSourcedb:"):
eEdb.empty_sourcedb()
e_sources = []
log.info("Removed point sources from edb: %s" % (eEdb.name))
else:
# sourcedb from emission edb (result edb)
with SourceStream(eEdb, mode='rb') as source_instream:
source_reader = ModelReader(source_instream)
e_sources = list(source_reader)
msg = "%i point sources found in edb: %s" % (len(e_sources), eEdb.name)
log.info(msg)
if not path.exists(eEdb.rsrcPath()):
log.error("No edb.rsrc exists for emission edb")
sys.exit()
else:
rsrc = Rsrc(eEdb.rsrcPath())
acIndex = cf.findInt("acIndex:")
codeDepth = rsrc.ac[acIndex-1].depth
substances = cf.findStringList("substances:")
for subst in substances:
if subst not in subdb.substIndices:
log.error("Substance: " + subst + " not in Airviro substance list")
sys.exit()
# Initialize trace for debug and additional logging
if cf.findBoolean("trace:") == True:
log.info("Initializing trace for detailed logging")
trace = TraceDef(
active=True,
substances=cf.findStringList("trace.substances:"),
logfile=cf.findString("trace.logfile:"),
regdefgc=cf.findIntList("trace.regdef.gc:",
optional=True,
default=None),
gcDefRaster=cf.findExistingPath("trace.gcraster:")
)
else:
trace = TraceDef(active=False)
log.info("Initializing result table")
resTablePath = cf.findString("resTable:")
resTable = DataTable(desc=[{"id": "Code", "type": unicode}])
resTable.keys.append("Code")
for subst in substances:
resTable.addCol({"id": subst, "type": float, "unit": "%"})
# Create emission grid template (with geocodes)
log.info("Reading emission grid template")
eGridTemplatePath = cf.findExistingPath("emisGridTemplatePath:")
eGridTemplate = Egrid(eEdb,"name")
if eGridTemplatePath[-4:] == ".asc":
eGridTemplatePath=eGridTemplatePath[:-4]
eGridTemplate.readData(eGridTemplatePath)
eGridTemplate.substances = {}
eGridTemplate.par["SUBSTANCE"].val = []
dd = {"key": None,
"regstat": None,
"regdef": None,
"bu_sources": bu_sources,
"psIndices": [],
"units": natUnits,
"rsrc": rsrc,
"subdb": subdb,
"trace": trace,
"subgrpdb": subgrpdb
}
# Process all rows in the topdown table
for row in tdTable.data:
code = row[tdTable.colIndex["Code"]]
active = row[tdTable.colIndex["Active"]]
statType = row[tdTable.colIndex["Stat_type"]]
if active == "no":
continue
log.info("Code: "+code)
distributed=False
# Add '-' to the code to reach max length (fix for a GUI bug)
airviroCode = code
# while len(airviroCode.split(".")) < codeDepth:
# airviroCode += ".-"
tdrow = tdTable.data[tdTable.rowIndex([code])]
nrow = natTable.data[natTable.rowIndex([code])]
# Create a resTable row to fill with data
resrow = [None] * resTable.ncols
resrow[0] = code
# Check if national totals are non-zero
nonZero = False
for val in nrow:
if val != None:
if val > 0:
nonZero = True
break
# Filter out indices for pointsources with the current ac
# Also including sources coded with sub-codes
# This allows to estimate top-down emissions on a higher code-level
psIndices = []
for i, ps in enumerate(bu_sources):
codeMatch = False
for emis in ps.EMISSION:
# It is assumed that the first code is used while processing topdown
ac = emis.ACTCODE[0]
if ac[-1] == ".":
ac=ac[:-1]
# if ac[:len(code)] == code:
if ac == code:
codeMatch = True
break
if not codeMatch:
for emis in ps.SUBGRP:
# It is assumed that the first code is used while processing topdown
ac = emis.ACTCODE[0]
if ac[:len(code)] == code:
codeMatch = True
break
if codeMatch:
psIndices.append(i)
dd["psIndices"] = psIndices
keyName = row[tdTable.colIndex["Key"]]
#If no distribution key specified and no ps in bottom-up edb - cont.
if keyName is None and psIndices == []:
log.debug("No key and no point sources found for code: %s, skipping..." % code)
resTable.addRow(resrow)
continue
if psIndices!=[]:
msg = "--Found %i pointsources" % len(psIndices)
log.info(msg)
if keyName is not None:
if keyName not in keys:
log.error("No such key: " + keyName)
sys.exit()
msg = "--Key: %s" % keyName
log.info(msg)
keyGrid = Egrid(tdEdb, keyName)
keyGrid.readData()
log.debug("Read key: " + keyName + " from topdownEdb")
# create emission grid to store distributed emissions
eGrid = deepcopy(eGridTemplate)
eGrid.name = code.replace(".", "_")
eGrid.par["NAME"].val = code
eGrid.par["INFO2"].val = "Distribution key: " + keyGrid.par["NAME"].val
eGrid.par["ACTIVITYCODE"].val = [airviroCode.split(".")]
regstatName = row[tdTable.colIndex["Regstat"]]
regdefName = row[tdTable.colIndex["Regdef"]]
if regstatName is not None:
if regdefName is None:
log.error("No region definition given for regional statistics: " +
regstatName)
sys.exit(1)
regstatPath = path.join(dmn.domainPath(), "topdown", "regstat", regstatName)
regstat = DataTable()
log.info("regstatPath: "+regstatPath)
regstat.read(regstatPath, units=True, defaultType=float, delimiter=";")
if not "Geocode" in regstat.listIds():
log.error("No Geocode column found in regstat")
sys.exit(1)
regstat.convertCol("Geocode", int)
regstat.keys.append("Geocode") # Making Geocode the primary key
# create list of unique geo codes
geocodes = [row[regstat.colIndex["Geocode"]] for row in regstat.data]
geocodes = unique(geocodes)
for colId in regstat.listIds():
if colId.lower() == "year":
rows = []
regstat.convertCol(colId, int)
# Make it possible to accumulate year
regstat.setKeys(regstat.keys + [colId])
# Calculates the total emission for each geocode
# in case there are multiple rows for different fuels etc
colsToSum = regstat.listIds()
colsToSum.remove(colId)
colsToSum.remove("Geocode")
for gc in geocodes:
# sums all numeric values in colsToSum for
# rows matching row id [gc,year]
#returns an accumulated row and appends it to rows
rowId = regstat.dict2RowId({"Geocode": gc, colId: year})
rows.append(regstat.accumulate(rowId, "sum", colsToSum))
regstat.data = rows # replace original rows with accumulated rows
regstat.keys.remove(colId)
break
# dd["regstat"] = regstat
regdef = Raster()
regdefPath = path.join(dmn.domainPath(), "topdown", "regdef", regdefName)
regdef.read(regdefPath)
dd["regstat"] = regstat
dd["regdef"] = regdef
else:
dd["regstat"] = None
dd["regdef"] = None
if dd["regstat"] is not None and len(bu_sources) > 0 and statType == "fixed":
log.info("--Regionalizing pointsources")
dd = regionalizePS(dd, code)
if keyName is not None and nonZero:
regionalizedDefault = False
# Spatial distribution of emissions
for subst in substances:
sInd = subdb.substIndices[subst]
toUnit = dd["units"][subst] + "/year"
ntot = nrow[natTable.colIndex[subst]]
pstot = 0
for i in dd["psIndices"]:
source = dd["bu_sources"][i]
# TODO: should give reference to subgrps to include emis from them
pstot += source.get_emis(
sInd,
toUnit,
eEdb,
actcodes=[code]
)
if ntot is None or ntot == 0:
if pstot > 0:
# 9999 is used as marker for no national total
resrow[resTable.colIndex[subst]] = 9999.0
log.warning(
"Nattot is 0 but ps tot is: %f %s" % (pstot, toUnit))
continue
nrest = ntot - pstot
resrow[resTable.colIndex[subst]] = 100.0
if abs(nrest / ntot) < 0.0001:
nrest = 0
log.info(
"--Rest is < 0.01 % of national total, rounded to zero"
)
continue
elif nrest < 0:
log.warning(
"--National rest is below zero, %4.2f proc for %s" % (
-1 * nrest / ntot * 100,
subst)
)
dd["trace"].write()
# continue
log.info(
"---Substance: "+subst+
", rest is: " + str(nrest) +
toUnit + " = " + str(nrest / ntot * 100.0) + "%"
)
try:
keyRast = keyGrid.substances[sInd]
except KeyError:
keyRast = keyGrid.substances[subdb.substIndices["all"]]
dd["key"] = keyRast
if dd["regstat"] is not None:
if (subst not in regstat.colIndex and
sInd not in keyGrid.substances and not regionalizedDefault):
dd = regionalizeKey(dd, subst, code)
regionalizedDefault = True
else:
dd = regionalizeKey(dd, subst, code)
emisRast = distribute(dd["key"], nrest)
emisRast = emisRast * unitConvFac(toUnit, "ton/year")
eGrid.addData(emisRast, dd["subdb"].substIndices[subst])
distributed = True
else:
# resTable is filled
# In case all national totals are zero but there are ps
for subst in substances:
sInd = dd["subdb"].substIndices[subst]
toUnit = dd["units"][subst] + "/year"
ntot = nrow[natTable.colIndex[subst]]
pstot = 0
for i in dd["psIndices"]:
source = dd["bu_sources"][i]
# subgrps are not used!
pstot += source.get_emis(sInd, toUnit, buEdb,
actcodes=[code])
if ntot!=0 and ntot is not None:
resrow[resTable.colIndex[subst]] = pstot / ntot * 100.0
else:
resrow[resTable.colIndex[subst]] = -999.0
if len(dd["psIndices"]) > 0:
tmp_sources = (bu_sources[i] for i in dd["psIndices"])
with SourceStream(eEdb, mode='wb') as out_source_stream:
source_writer = ModelWriter(out_source_stream)
for source in tmp_sources:
source_writer.write(source)
log.debug("Wrote ps to emission edb")
if distributed:
eGrid.load()
log.debug("Wrote emission grid to emission edb")
dd["trace"].write()
resTable.addRow(resrow)
resTableFile = open(resTablePath,"w")
resTable.write(resTableFile)
log.info("Finished topdown process")
