def _check_run(self, run, inform, test):
if test:
run.test_scripts(script_context=self._script_context,
warned=self._warned,
duration=False)
err = self._check_attr(run, 'labnumber', inform)
if err is not None:
return err
ant = get_analysis_type(run.labnumber)
if ant == 'unknown':
for attr in ('duration', 'cleanup'):
err = self._check_attr(run, attr, inform)
if err is not None:
return err
if run.position:
if not run.extract_value:
return 'position but no extract value'
#if ant in ('unknown', 'background') or ant.startswith('blank'):
#self._mass_spec_required = True
if run.extract_value or run.cleanup or run.duration:
self._extraction_line_required = True
def check_massspec_database_save(identifier):
ret = True
if identifier == 'bu-debug':
ret = False
elif get_analysis_type(identifier) == 'detector_ic':
ret = False
return ret
def check_massspec_database_save(identifier):
ret = True
if identifier == 'bu-debug':
ret = False
elif get_analysis_type(identifier) == DETECTOR_IC:
ret = False
return ret
def _check_run(self, run, inform, test):
if test:
run.test_scripts(script_context=self._script_context,
warned=self._warned,
duration=False)
err = self._check_attr(run, 'labnumber', inform)
if err is not None:
return err
ant = get_analysis_type(run.labnumber)
if ant == 'unknown':
for attr in ('duration', 'cleanup'):
err = self._check_attr(run, attr, inform)
if err is not None:
return err
if run.position:
if not run.extract_value:
return 'position but no extract value'
if run.overlap[0]:
if not run.post_measurement_script:
return 'post measurement script required for overlap'
#if ant in ('unknown', 'background') or ant.startswith('blank'):
#self._mass_spec_required = True
if run.extract_value or run.cleanup or run.duration:
self._extraction_line_required = True
def check_secondary_database_save(identifier):
ret = True
if identifier == 'bu-debug':
ret = False
elif get_analysis_type(identifier) == 'detector_ic':
ret = False
return ret
def _save_detector_ic_csv(self):
from pychron.experiment.utilities.detector_ic import make_items, save_csv
from pychron.experiment.utilities.identifier import get_analysis_type
if get_analysis_type(self.per_spec.run_spec.identifier) == DETECTOR_IC:
items = make_items(self.per_spec.isotope_group.isotopes)
save_csv(self.per_spec.run_spec.record_id, items)
def _save_detector_ic_csv(self):
from pychron.experiment.utilities.detector_ic import make_items, save_csv
from pychron.experiment.utilities.identifier import get_analysis_type
if get_analysis_type(self.per_spec.run_spec.identifier) == 'detector_ic':
items = make_items(self.per_spec.isotope_group.isotopes)
save_csv(self.per_spec.run_spec.record_id, items)
def analysis_type(self):
return get_analysis_type(self.identifier)
def analysis_type(self):
return get_analysis_type(self.labnumber)
def analysis_type(self):
return get_analysis_type(self.identifier)
def analysis_type(self):
return get_analysis_type(self.labnumber)
def _atype_tester(self, idn, atype):
self.assertEqual(get_analysis_type(idn), atype)
