def test_distances(self):
A = np.random.rand(3, 100)
B = np.random.rand(3, 100)
np.testing.assert_equal(pyhmf.Space().distances(A, B).flatten(),
pynn.Space().distances(A.T, B.T))
def test_distances_scale(self):
A = np.random.rand(3, 100)
B = np.random.rand(3, 100)
np.testing.assert_equal(
pyhmf.Space(scale_factor=42.).distances(A, B),
pynn.Space(scale_factor=42.).distances(A, B))
def test_distances_offset(self):
A = np.random.rand(3, 100)
B = np.random.rand(3, 100)
offset = np.random.rand(3, 1)
np.testing.assert_equal(
pyhmf.Space(offset=offset).distances(A, B).flatten(),
pynn.Space(offset=offset.T).distances(A.T, B.T))
def test_distances_boundaries(self):
A = np.random.rand(3, 100)
B = np.random.rand(3, 100)
np.testing.assert_equal(
pyhmf.Space(periodic_boundaries=((0, 1), None,
(0, 1))).distances(A, B),
pynn.Space(periodic_boundaries=((0, 1), None,
(0, 1))).distances(A, B))
def test_distances_boundaries_scale_offset(self):
A = np.random.rand(3, 100)
B = np.random.rand(3, 100)
offset = np.random.rand(3, 1)
np.testing.assert_equal(
pyhmf.Space(scale_factor=42.,
offset=offset,
periodic_boundaries=((0, 42.), None,
(0, 42.))).distances(A, B),
pynn.Space(scale_factor=42.,
offset=offset,
periodic_boundaries=((0, 42.), None,
(0, 42.))).distances(A, B))