def test_from_numpy1D(self):
n = UiNode.from_py_object('n', np.arange(5))
if 0:
print 'n:'
print n.log()
o = Initable.from_ui_node(n)
assert_array_equal(o, np.arange(5))
def test_to_xml(self):
pyhrf.verbose.set_verbosity(0)
d = Dummy2()
n = UiNode.from_py_object('dummy', d)
xml = n.to_xml()
if pyhrf.verbose.verbosity > 0:
print 'xml:'
print xml
def test_from_numpy_scalar(self):
a = np.float128(1.2)
n = UiNode.from_py_object('a', a)
if 0:
print 'n:'
print n.log()
o = Initable.from_ui_node(n)
self.assertEqual(o, a)
self.assertEqual(o.dtype, a.dtype)
def test_from_numpyND(self):
sh = (2,3,4,5)
a = np.arange(np.prod(sh)).reshape(sh)
n = UiNode.from_py_object('n', a)
if 0:
print 'n:'
print n.log()
o = Initable.from_ui_node(n)
assert_array_equal(o, a)
def test_from_xml(self):
pyhrf.verbose.set_verbosity(0)
d = Dummy2(p=56)
n = UiNode.from_py_object('dummy', d)
if pyhrf.verbose.verbosity > 0:
print 'n:'
print n.log()
print ''
xml = n.to_xml()
if pyhrf.verbose.verbosity > 0:
print 'xml:'
print xml
n2 = UiNode.from_xml(xml)
if pyhrf.verbose.verbosity > 0:
print 'n2:'
print n2.log()
print ''
def test_xml_io(self):
pyhrf.verbose.set_verbosity(0)
info = {'test':53}
treatment = Treatment(FmriData(func_file='blah.nii'),
Analyser(nb_iterations=345),
info=info)
root_node = treatment.to_ui_node('treatment')
if pyhrf.verbose.verbosity > 0:
print 'root_node:'
print root_node.log()
sxml = root_node.to_xml()
if pyhrf.verbose.verbosity > 0:
print 'sxml:'
print sxml
print ''
print 'from_xml ...'
root_node2 = UiNode.from_xml(sxml)
if pyhrf.verbose.verbosity > 0:
print 'root_node2:'
print root_node2.log()
print ''
treatment2 = Treatment.from_ui_node(root_node2)
if pyhrf.verbose.verbosity > 0:
print 'treatment2:'
print treatment2
def test_serialize_init_obj(self):
d = Dummy2()
s = UiNode._serialize_init_obj(d.__init__)
f = UiNode._unserialize_init_obj(s)
self.assertEqual(d.__class__, f)
def from_xml(self, xml):
from pyhrf.sandbox.design_and_ui import UiNode
return Initable.from_ui_node(UiNode.from_xml(xml))